Corvus cornix (hooded crow): 104691890
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Entry
104691890 CDS
T03546
Symbol
CNGB1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
104691890 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccw04040
]
104691890 (CNGB1)
Ion channels [BR:
ccw04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
104691890 (CNGB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
104691890
NCBI-ProteinID:
XP_039414371
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All DBs
Position
11:6391949..6421313
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AA seq
1344 aa
AA seq
DB search
MMGWIDRVVPQPPAPHVTEETPVQEPEPVKAPTGKASGPTDAADQARTEETEKKVAFVVS
EDSSSVFESVGSSVLSWLSYGLEKVIPQPAPGLQALGKSFETSIDIADETEVQVLGDEDN
SLEITPFDPEEDVSEDEAEADAEEWTGKRVLNWLSQGFERIVPQPEGMKKPETEPKKSEG
AVEGTKETKTQAKSKSSTSAGQSTPAAAAAKGQPGPVTALSPQSVAVDSGRMFTWFVQGL
EKVMPQPVTREARDTQGVATATSSPVEQIHAAPGEQEQTHLVLQEIDDDQINEGVTAWAH
KAELEAAAPSLPTIQEEPQEEEDRLSLCSPNTTKGEEEKEEEDKKEEEERKKEEEEERKK
EEEEERKKEDDEMKQEEEEERKKEEDETKQEEEDKKKEEEERKKEEEEEEDRKKEEEERK
QEEEEDRKKEEEERKQEEEEERRKEEEEDSENEEEQRKEEEEEERKKEEEDRKEEEDRKK
EEEEREEEEDRKKEEEEKKEEVRKKEQAKKRDKEKKKEEKRKEEDKKEEEQNESAEPLLQ
PPCLPDDEGVDEACLAEETLRIEQLEEAEISNLEGALVQVEEETAEAAETDAEGNYPTLE
IKDVDSPGHAVEIHATSLPVPTASAPNLLAVPGAASPRRKRLLPEDGLDEGLGSQSPTRV
LGWDEEQRKSLPEHIGSATSLSSAIINTRLQELVRLFKERTEKVKEKLIDPDVSSDDESP
VASPTKPAPAAAVPAPGGEPEDKPLGDDHYCEMLCCTFKSRPWLDRLKSYQFPSSIDPLT
NLMYVLWLFFVVMAWNWNCWLIPVRWAFPYQTPANIHYWLLVDYLCDLIYLLDILVFQTR
LQFVQGGDIITDKEAMKKNYLHSQRFKMDVLCLLPLDFFYFKVGVNPLLRFPRCLKYMAF
FEFNNRLEAILTKAYIYRVIRTTAYLLYSLHVNSCLYYWASAYEGLGSTTWVYDGEGNSY
IRCYYWAVKTLITIGGLPDPKTLFEIVFQLLNYFTGVFAFSVMIGQMRDVVGAATAGQTY
YRSCMDSTIKYMNFYKIPKSVQNRVKTWYEYTWHSQGMLDESELLVQLPDKMRLDIAIDV
NYNIVSKVALFQGCDRQMIFDMLKRLRSVVYLPNDYVCKKGEIGREMYIIQAGQVQVLGG
PDGKSVLVTLKAGSVFGEISLLAAGGGNRRTANVVAHGFANLFILEKKDLNEILVHYPES
QKLLRKKAKKMLKNNNKPKDEKGDPGDPLIILPKADTPKLFKAALAATGRMRGKGPLERL
QWRLKELKAMQEAQGSSVTPTPPKSPVHQRSPVTSHKAQTRLGEEISSESPDHSVTIRVI
STAEEDEEILAAEISEKDEKKEEK
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atgatgggctggatcgaccgggtggttccccagcccccggcgccccatgtgacagaggag
acccctgtgcaggagccagagccagttaaggcaccaacaggaaaggccagcggccccacg
gatgctgctgaccaggcacgcactgaggaaacggaaaagaaggtggcgtttgtggtctct
gaggactcaagttctgtgtttgagagtgtggggagtagtgtgctctcctggctctcctat
gggctggagaaggtgattccccagccagctccagggctgcaggcacttgggaagagcttc
gagacaagcatcgacattgctgatgagacagaggtccaggtccttggggatgaggacaac
agtctggagataacccccttcgatcccgaggaggacgtgtctgaggacgaagcggaggcc
gacgcggaggagtggacaggaaagcgggtgctcaactggctgtcacagggcttcgagagg
attgtgccgcagcctgaggggatgaaaaagccggagaccgagccgaagaagagcgaaggc
gcggtggaaggcacaaaagagactaaaacccaggcaaagtcaaaatccagcacttcagcc
ggacagagcaccccagcggcagcagcagccaaggggcagccggggccagtgaccgccctc
agccctcagtccgtggctgtggacagcggcaggatgttcacctggtttgttcaggggctg
gagaaggtgatgccacagccggtgaccagggaggcgcgggacacacagggagtggccaca
gcaacctcaagtcctgtggaacaaattcatgcagcccctggggagcaggagcagacccat
ctcgttctgcaagagatcgatgatgaccagattaacgaaggggtgacggcctgggctcac
aaggctgagctggaggcagctgctccttcccttcccaccatacaggaggaacctcaggag
gaagaagacagactgtctttgtgctccccaaacactacaaagggggaagaggaaaaggag
gaagaggataagaaggaggaggaagagaggaagaaagaggaggaagaggagaggaagaaa
gaggaggaagaggagaggaaaaaagaggacgatgagatgaagcaagaggaggaagaggag
aggaaaaaagaggaagatgagacgaagcaagaggaggaggacaagaaaaaggaggaagag
gagaggaagaaagaggaggaggaggaggaggacaggaaaaaagaggaagaggagaggaag
caagaggaggaggaggacaggaaaaaagaggaagaggagaggaagcaagaggaggaagag
gagaggaggaaagaggaggaagaggacagtgaaaatgaggaagagcagaggaaggaagag
gaggaagaggagaggaagaaagaggaggaggacaggaaggaggaggaggacaggaagaaa
gaggaagaggagagggaggaggaggaggacaggaagaaagaggaagaggagaagaaggag
gaggtgaggaagaaagagcaggcgaagaaaagagataaagagaagaagaaagaggaaaag
aggaaagaggaagataagaaagaggaggagcagaacgagagtgcagaacccctgctgcag
ccaccttgtctccctgatgatgagggtgtggatgaagcctgccttgccgaggagaccctc
aggattgagcagctggaagaagctgagataagtaatctcgaaggcgctcttgtccaggtg
gaagaggagacagctgaagctgctgaaaccgatgctgaaggtaattaccccaccctggag
atcaaggatgtggacagcccaggccatgctgtggagatccatgctacctctttaccagtg
cccaccgccagtgctcccaacctgctggcggtgcccggcgcagcatcccccaggaggaag
cgactgctcccagaggatggtctggacgaggggctggggagccagtcccccacccgagtg
ctgggctgggatgaggagcagaggaaaagcctgcccgagcacatcggctcggccacgagc
ctgagcagtgccatcatcaacactcggctccaggagctggtgaggctcttcaaagagagg
accgagaaggtgaaggagaagctgatcgaccccgatgtcagctcggacgatgagagccct
gtggcatctcccaccaagccagcacctgcagcagcggtgcctgccccaggaggggagcca
gaggacaagcctttgggggatgaccactactgcgagatgctgtgctgcacattcaagtcc
cggccctggctggaccgcctgaaaagctaccagttccccagcagcatcgacccgctcacc
aatttgatgtacgtgctgtggctgttctttgttgtcatggcctggaactggaactgctgg
ttgatccctgtccgctgggctttcccctaccagactccagcaaacatccactactggctg
ctggtggactacctctgtgacctcatttatctgctggacatcctcgtctttcagacccgg
ctgcagttcgttcaggggggagacatcatcactgacaaagaggccatgaaaaaaaactac
ctgcactcacaacgcttcaagatggatgtgctgtgcctcctgccgctggatttcttctac
ttcaaagtcggtgtcaaccccctcctgcgctttcctcgctgtctgaagtacatggccttc
tttgagttcaacaaccgtctggaggccatcctgaccaaggcatacatctacagagtgatt
cggaccactgcctacttactgtacagcctgcacgtcaactcctgcctctactactgggcc
tcagcctacgaaggactgggctccaccacctgggtctatgatggggaaggaaacagctac
atccgctgttactactgggcagtcaaaaccctcatcaccatcgggggcctgccagacccc
aagacactgtttgagatcgtcttccagctgctgaactacttcacaggcgtctttgctttc
tctgtcatgatagggcagatgagagacgtggtcggcgccgctactgcagggcagacttac
tatcggagctgcatggacagcaccattaaatacatgaacttctacaagatccccaaaagt
gttcagaaccgggtgaagacgtggtatgagtacacgtggcactctcaaggcatgctagat
gagtcagagctgctggtgcagctgccagacaagatgaggctggacatcgccatcgacgtg
aactacaacatcgtgagcaaagtggcccttttccagggttgtgacagacagatgatcttt
gacatgctgaagcggctcagatcagtggtctacctgcccaacgactacgtgtgcaagaag
ggagaaataggccgcgagatgtacattatccaggcgggacaagtgcaggtgctgggggga
cccgatggcaaatccgtgctggtgactctgaaagctggatctgtctttggagaaatcagc
ttgctggcagcaggagggggaaatcgccggacagcgaacgtcgtggcccacggcttcgcc
aacctttttattttggagaagaaggacttgaacgagattttggtgcattacccggagtct
cagaagctgctgcgtaagaaggccaagaaaatgctgaaaaacaacaacaaacccaaagat
gagaagggagaccccggagatccactgatcatcctcccaaaagctgacaccccaaagctc
ttcaaggctgccctggctgccacggggaggatgaggggcaaagggcccctggagcggctc
cagtggaggctgaaggagctgaaggcgatgcaggaggcacagggttccagcgtcacccca
accccaccaaaatcacctgtgcaccagagatcgcctgtcacatcccacaaagcacaaacc
cgcctgggagaagaaatatcttcagaatctcctgatcattcagtcaccattcgggtgatt
tccacggcagaagaagatgaggaaatccttgctgctgagatttcagagaaagatgaaaaa
aaagaagagaaatga
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