Corvus cornix (hooded crow): 104693572
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Entry
104693572 CDS
T03546
Symbol
CACNA1E
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent R-type calcium channel subunit alpha-1E
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04010
MAPK signaling pathway
ccw04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104693572 (CACNA1E)
04020 Calcium signaling pathway
104693572 (CACNA1E)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccw04040
]
104693572 (CACNA1E)
Ion channels [BR:
ccw04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104693572 (CACNA1E)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
104693572
NCBI-ProteinID:
XP_039411687
LinkDB
All DBs
Position
8:31582199..31711698
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AA seq
2428 aa
AA seq
DB search
MLGFGTCSMGAPAPGRGAELDTASSRCVLALPEEETWHQHRLALMQNTQSCNLLEPESLA
QALVSRATSFDALYDSRSRDADADTGSAVDLGLGQLVPVSPDVIKRRRGGLIEQRDIIKA
HEAHKMQSTPQARRKEWEMARFGEAVAGRLGSGDGGSDQNRSRQGAPAPAGGSPGAFKQT
KAQRARTMALYNPIPVRQNCFTVNRSLFLFGEENIVRKYAKKLIDWPPFEYMILATIIAN
CIVLALEQHLPEDDKTPMSRRLEKTEPYFIGIFCFEAGIKIVALGFVFHKGSYLRNGWNV
MDFIVVLSGILATAGTHFNTHVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLL
QIGLLLFFAILMFAIIGLEFYSGKLHRACYTNNSGELEELDPPHPCGVQGCPPGYECREW
IGPNDGITQFDNILFAVLTVFQCITMEGWTTVLYNTNDALGATWNWLYFIPLIIIGSFFV
LNLVLGVLSGEFAKERERVENRRAFMKLRRQQQIERELNGYRAWIDKAEEVMLAEENKNS
GTSALDVLRRATIKRNRTDAMSSDEHCVDISSVGERRLAQRRRLNPTLGNPSSHSGLKGA
RVDGASYLRHKERLLRISVRHMVKSQVFYWIVLSLVALNTACVAIVHHNQPAWLTHFLYY
AEFLFLGLFLLEMSLKMYGMGPRLYFHSSFNCFDCGVTVGSIFEVVWAIFRPGTSFGISV
LRALRLLRIFKITKYWASLRNLVVSLMSSMKSIISLLFLLFLFIVVFALLGMQLFGGRFN
FMDGTPSANFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVRSGMWSSIYFIVLTLFG
NYTLLNVFLAIAVDNLANAQELTKDEQEEEEAFNQKHALQKAKEVSPMSAPNMPAIERDR
RRRHHMSMWEPRSSHLRERRRRHHMSVWEQRTSQLRRHMQMSSQEGINKDEPPLINPHAS
IFRRKKPGDGVTLEKCTEEQGKGERPLAEGPEQPVPGANPSGGEDRTSPRAKRDKDMWQQ
KSCHGNCEPGEQDGAGGSIEDRARMRQSQRRSRHRRARMEGKDILGSRSASQEMGLEEAS
TVEGAQDGDRRGDVAAAEALIPGEPEASGESIRTNGVPAGDADLIGSAKKGSPPHAGTEL
SQGKTGNLMEQDCSSPDTSEQALLEPSRTVSLSEPDLSSITPNTEKATESTAIMIDVHDS
AVVQISNKTDGEASPLKEAETKEDEEEMEKKKQKKEKSKTGKAMVPHSSMFIFSTTNPVR
RACHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSDRNKVLRYFDYVFTGVFTFEMVI
KMIDQGLILQDGSYFRDLWNILDFIVVVGALVAFALANALGTNKGRDIKTIKSLRVLRVL
RPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSK
DTQKDCIGNYVDHEKNKMEVKCREWKRHEFHYDNIIWALLTLFTVSTGEGWPQVLQHSVD
VTEEDRGPSRSNRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNE
RACIDFAISAKPLTRYMPQNRHTFQYRVWHFVVSPSFEYTIMAMIALNTVVLMMKYYSAP
YTYELALKYLNIAFTMVFSLECVLKIIAFGFLNYFRDTWNIFDFITVIGSITEIILTDTK
LVNTSSFNMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAI
IGMQVFGNIKLDEESHINRHNNFRSFLGSLMLLFRSATGEAWQEIMLSCLEGKGCEPDTT
ATSGQNENERCGTDLAYVYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDE
FVRIWAEYDRAACGRIHYTEMYEMLTLMSPPLGLGKRCPSKVAYKRLVLMNMPVAEDMTV
HFTSTLMALIRTALDIKIAKGGADWQQLDSELQKEILTIWPHLSQKMLDLLVPMPKNSDL
TVGKIYAAMMIMDYYKQSKAKKQRQQLEEQKNAPMFQRMEPSSLPQEIISNAKALPYLQQ
DTLSGLSSRGGFPSLSPLSPQEIFQLACMDPAHEQFQEHQSLEPEVREFQRVQPSNHGSY
LPVDTQDHAVSGRASSMPRLTVDPQVVTDTSSMRRSFSTIRDKRPNSSWLDEFSMERSSE
NTYKSRRRSYHSSLQLSARRLNADSGHRSEGHRSGRERGRSKERKHLLSPDISRCNSEER
SPQAHEESPERRRESRSPSEGRSQTPSRQGMGSLSESSIPSISDTSTPRRGRRQLPPVPP
KPRPLLSYASMLRHAGDTSPPADESEGGSPLLSSTLDPNTAXPAESSSSPAGKQSRQSTP
QRYISEPYLALHDDSHASDCGEEETLTFEAAVATSLGRSNTIGSAPPLRHSWQMPNGHYR
RRRRGAAQGVMCGASIDVLSDTEEDDKC
NT seq
7287 nt
NT seq
+upstream
nt +downstream
nt
atgctgggattcgggacgtgctccatgggcgccccggcaccaggcaggggggctgagctg
gacactgcctcgtcccgctgtgtcctggccctgcccgaggaggagacgtggcaccagcac
cggctggccctgatgcagaacacccagtcctgcaacctgctggagcccgagagcctggcc
caggccctggtgtcccgcgccacctccttcgacgccctctacgattcccgctcccgggat
gccgacgcggacaccggcagcgccgtggacctggggctgggccagctggtgcccgtgagc
ccggacgtgatcaagcgccggcggggagggctcatcgagcagagggacattatcaaggca
cacgaggcacacaagatgcagagcacgccccaggcgcggaggaaggagtgggagatggct
cgctttggggaggcagtggccggcaggctgggctccggagatgggggctccgaccagaac
cggagccggcaaggagctcctgcccctgcgggagggagccctggagccttcaagcaaacc
aaagcgcagagagcccggactatggctctgtacaaccccatccctgtccggcagaactgc
ttcaccgtcaacagatcgctcttcctctttggggaagagaacatagtcaggaaatatgcc
aagaagctcatcgactggcctcccttcgagtacatgatcctggcaaccatcattgccaac
tgcatcgtgctggccctggagcagcacctgcccgaggatgacaagacgcccatgtcacgg
agattagagaagacggagccctacttcattgggattttctgcttcgaggctgggattaag
atcgtggccctagggttcgttttccacaagggctcgtacctgcgcaatggctggaacgtc
atggacttcattgtggtcctcagcggcatcctcgccacggccgggacacacttcaacacc
cacgtggacctgcggacactgcgggccgtgcgcgtgctcaggcctctgaagctcgtctcg
ggcattcccagcttgcagattgtcctgaaatccatcatgaaggccatggtgcctctcctc
cagatcggtctgctgctcttttttgccatcctcatgtttgccatcatcggcctggagttc
tacagcgggaagctgcaccgagcctgctacacaaacaattcaggtgaactagaggagctg
gaccctccccatccctgcggggtgcagggttgccccccgggctatgagtgccgggagtgg
atcggtcccaacgacgggatcacgcagttcgacaacatcctctttgctgtgctgaccgtc
ttccagtgcatcaccatggaagggtggaccacagtcctgtacaataccaatgatgcctta
ggagccacctggaactggctgtacttcatccccctcatcatcattggatccttctttgtc
ctcaaccttgtcctgggagtgctgtcaggggagtttgccaaagagcgagagcgcgtggag
aaccgccgagccttcatgaagctgcggcgccagcagcagatcgagcgggagctcaacggc
taccgggcatggatagacaaagcggaggaagtcatgctggctgaagagaacaaaaactcg
gggacctcagccttagacgtcctcaggcgagccaccatcaagcggaaccggacggatgcc
atgtcgagtgacgagcactgcgtcgacatctcctccgtgggcgagcggaggctggcgcag
agaagacgtcttaatccaaccttgggtaacccctcgagtcactctggcctcaaaggcgcc
agggtggacggtgcctcctacttacggcacaaggagcggctcctgcgcatctccgttcgc
cacatggtgaaatcccaggtcttctactggatcgtactgagcctggtggctctcaacact
gcctgtgtggccatcgtccatcacaaccagccagcctggctcacccacttcctctactat
gcagagttcctgtttcttgggctcttccttctggagatgtccttaaagatgtacgggatg
gggccacgcctttacttccattcttccttcaactgcttcgactgtggggtcacagtggga
agcatcttcgaagtggtttgggctatattcagaccaggaacctcttttggaatcagtgtc
ctacgagctcttcgtctcctgcgcatatttaaaataaccaagtactgggcatccctgagg
aacttggtggtctcgctgatgagctccatgaaatctattatcagtctgctcttcctcctt
ttcctcttcattgtagtctttgccctgctgggaatgcagctgtttggaggcaggtttaac
ttcatggatgggactccatcggccaactttgacaccttccctgcagccatcatgacagtg
tttcagatcctgacaggcgaggactggaacgaggtgatgtacaacggcatccgctcccag
ggaggcgtgcgctcagggatgtggtcctccatctacttcatcgtcctcaccttgtttgga
aactatactctgctgaacgtcttcttggccattgctgtggacaacctggccaatgctcaa
gagctcaccaaggatgagcaggaggaagaggaggcctttaaccagaagcacgcccttcag
aaagccaaagaagtcagccccatgtctgccccaaacatgcctgctatcgaaagagacagg
cggaggagacaccacatgtcgatgtgggagccacgcagcagccacctgcgggagcggcgc
cggcggcaccacatgtcagtgtgggagcagcgcacaagccagctgcgccggcacatgcag
atgtccagccaggagggcatcaacaaggatgagccgcccctcatcaatccccacgccagc
atcttccgcaggaagaaacctggggatggcgtcaccctggagaaatgcaccgaggagcag
gggaagggtgagcggccgctggccgagggacctgagcagccagtcccaggggccaacccc
agcggtggtgaggacaggacatcgccccgggccaagcgggacaaggacatgtggcagcag
aaatcttgccacgggaactgtgagccaggagaacaggatggggcaggaggcagcatcgag
gacagggccaggatgaggcagagccagcggcgcagccggcaccgcagagcccgcatggag
ggcaaggacatcttggggagccgctcggccagccaggagatggggctggaggaggccagc
accgtggagggggcacaggacggggaccggcgtggggacgtggctgcagcagaggcgctg
attccgggggagccagaggcgagcggggagtccatcaggacaaacggggtccctgctggc
gatgccgatctgattgggagcgccaagaaggggagccccccacacgccggaactgagctc
tcccaggggaagacgggcaacctgatggagcaggactgcagcagcccagacaccagtgag
caggcgctgctggagcccagccgcaccgtgagcctcagcgagcccgacctctcctccatc
acccccaacaccgagaaggccactgagagcacggccatcatgatcgatgtccacgactcc
gctgtggtacagattagcaacaagacagatggtgaagccagccccttaaaggaggctgag
accaaagaggatgaggaggaaatggagaagaagaagcagaagaaggaaaagagcaaaacg
ggcaaagcgatggtgccgcacagctccatgttcatcttcagcaccaccaacccggtgagg
agggcctgccactacatcgtgaacctgcgctacttcgagatgtgcatcctcctggtgatc
gccgccagcagcatcgccctcgccgccgaggatcccgtcctcaccaactccgaccgcaac
aaagtcctgaggtattttgattacgtcttcactggcgtcttcacctttgagatggtgatc
aagatgattgatcagggcttgatcctgcaggatggctcctacttccgggacctctggaac
atcctggatttcattgtggtggtgggagcactggtggcttttgccttggcgaatgctttg
gggaccaacaagggccgggatatcaagaccatcaagtctctccgtgtgctgcgggtattg
aggcccctgaaaaccatcaagagactgcccaagctgaaggccgtttttgactgcgttgtg
acatctctcaagaacgtcttcaacatcctcattgtctacaagctcttcatgttcatcttt
gctgtcatcgccgtgcagctcttcaaggggaagttcttctactgcactgacagctcgaag
gacacgcagaaggactgcatagggaactacgtggaccacgagaagaacaagatggaggtg
aaatgccgggagtggaagcggcacgagtttcactatgacaatatcatctgggctctgctc
accctgttcacagtgtccactggcgaggggtggccccaggtgctgcagcactcggtggat
gtgacagaggaggaccgtgggcccagccgcagcaaccgcatggagatgtccattttctat
gtcgtctactttgtggtcttccctttcttcttcgtcaacatttttgtggctctcatcatc
atcacattccaagagcaaggagacaaaatgatggaggagtgcagtctggagaagaacgag
agggcctgtattgactttgccatcagcgccaagcccctgacgcggtacatgccccagaac
agacacaccttccagtaccgcgtgtggcacttcgtggtgtccccgtccttcgagtacacc
atcatggccatgatagcgctcaacaccgtggtgctcatgatgaagtactattctgctcca
tacacctatgagctggccctgaagtacctgaacattgccttcaccatggtgttctccttg
gagtgcgtcctcaagatcattgctttcggcttcctgaattatttccgggacacctggaac
atatttgacttcatcacggtcatcggcagcattacagagatcatcctgacggacaccaag
ctggtgaacaccagcagcttcaacatgagcttcctgaagcttttccgggctgctcggctc
atcaagctgctccgccagggttacaccatccgcatcctgctctggacgtttgtgcagtcc
ttcaaggcactcccctatgtctgcctcctgattgccatgcttttcttcatctatgccatc
attgggatgcaggtttttggcaatatcaaactagatgaggaaagccacattaaccggcac
aacaacttccgcagcttcttgggctccctcatgctcctcttcaggagtgccaccggagag
gcgtggcaggagatcatgctgtcctgcctggagggcaaaggctgcgagccggacacgacg
gcgacatccgggcagaatgagaacgagcgctgcggcaccgacctggcctacgtttacttt
gtgtccttcatcttcttctgctccttcctgatgctcaacctgtttgtggcagtcatcatg
gacaactttgaatacctgacacgggattcctccatcctgggccctcaccatctggatgag
tttgtccggatctgggcagagtatgaccgagcagcgtgtggccgaatccattacactgag
atgtatgaaatgctgactcttatgtcaccaccgctaggcctcggcaagagatgtccttcc
aaagtggcctataagagactggtgctgatgaacatgcccgtggccgaggacatgacagtc
cacttcacctctaccctcatggcgctgatccgcacggccttggacatcaaaattgccaaa
ggtggtgcagattggcagcagttggactccgagcttcaaaaggagatcctgaccatttgg
cctcacctgtcccagaagatgcttgacctgttggtacccatgccaaaaaactctgacctg
actgttgggaaaatatatgcagccatgatgatcatggattactacaagcagagcaaggca
aagaagcagcggcagcagctggaggagcagaaaaacgctcccatgttccagcgcatggag
ccgtcctctctgccacaggaaatcatctccaatgccaaggctctgccgtacctccagcag
gacaccctctcgggcctgagcagccgaggtgggttcccctcgctgagcccactgtcacca
caggagatcttccagctggcgtgcatggatccggctcacgagcagttccaggagcaccag
tctctggagccagaggttagggagtttcaaagagtgcagccctctaaccatggcagctac
cttcccgtggacactcaggaccatgctgtctctgggagggcctcctccatgcctcgtctc
actgtggatccccaggtggtgacagacaccagctccatgcggagatcgttctccaccatc
cgggacaagcggcccaacagctcctggctggatgagttctccatggagcgcagcagcgag
aacacctacaagtcccgccggcgcagctaccactcctcgctccagctgtccgcccggcgc
ctcaatgctgactcaggccaccggtccgaggggcaccgctcaggcagggagcggggccga
tccaaagagcgcaagcacctgctgtcccctgacatctcccgctgcaactctgaggagagg
agtccccaggcacatgaggagtcaccggagcggcggcgcgagtcccggtcacccagcgag
ggcaggtcacagacacccagcaggcagggcatgggctccctgagcgaaagctccatcccc
tccatctcggacaccagcacgccccggcgaggccgccgccagctgccgccggtgcccccc
aagccgcgccccctcttgtcctacgcctccatgctgcggcacgccggggacacctctccg
cccgccgacgagagcgaggggggctcgccgctcctctcctccaccctggatcccaacacg
gccnggccggccgagtcttccagctccccggcggggaagcagagccggcagtccaccccg
cagcgctacatctcggagccctacctggcgctgcacgacgactcgcacgcctcagactgc
ggtgaggaggagacgctcaccttcgaggcggccgtggccaccagcctcggccgctccaac
accatcggctcggcgccgccgctgcggcacagctggcagatgcccaatgggcactaccgg
cggcggcggcgaggggcagcgcagggcgtcatgtgcggggccagcatcgacgtgctcagc
gacaccgaggaagacgacaagtgctag
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integrated database retrieval system