Corvus cornix (hooded crow): 104695753
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Entry
104695753 CDS
T03546
Symbol
SLC6A11
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104695753 (SLC6A11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccw02000
]
104695753 (SLC6A11)
Transporters [BR:
ccw02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104695753 (SLC6A11)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
104695753
NCBI-ProteinID:
XP_010408050
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Position
12:complement(2558543..2645022)
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AA seq
620 aa
AA seq
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MTAEKTIPIINGKPEDALDPEASSTNLVHINDKKVHERGHWNNKVEFVLSVAGEIIGLGN
VWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGI
GYATQVIEAHLNVYYIIILAWAIFYLFNCFTTELPWASCGHEWNTENCVEFQKLNMSNCS
QVSLQNATSPVMEFWERRVLAISDGIEHIGNLRWELALCLLAAWTICYFCIWKGTKSTGK
VVYVTATFPYIMLMILLIRGVTLPGASEGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAI
CLGCLTALGSYNNYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQGVPIAEVAE
SGPGLAFIAYPKAVTMMPLSPLWAALFFMMLIFLGLDSQFVCVESIVTAVVDMYPKVFRR
GYRRELLILGLSIVSYFLGLIMLTEGGMYVFQLFDSYAASGMCLLFVAIFECVCIGWVYG
SNRFYDNIEDMIGYKPVSLIKWCWMVLTPGICAGIFIFFLVKYKPLKYNNVYIYPDWGYG
IGWMMALSSMVCIPLWICIKLWKTEGTFLEKFRKLITPSSDLKMRGKLGGGAYIAAINDC
DAKLKGDGTISTITEKETHF
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgaaaagactattcctataattaatggcaagccagaagatgctttggaccca
gaagcttcaagtactaacctcgtccacatcaatgataagaaagttcatgaaagaggccac
tggaacaataaggttgaatttgtgctttctgtggcaggagagattattgggttgggaaac
gtctggagattcccatatctttgctacaagaatggaggaggtgctttcctcatcccctac
gtggtcttttttatttgctgtggaataccagtatttttcttggagacagccttgggacag
tttacaagtgaaggaggcatcacatgctggaggaaagtttgccctctatttgaaggcatt
ggctatgctacccaagttatagaggcacacctaaatgtatattacatcatcattttagca
tgggctatcttctatttgttcaactgctttactacagagcttccctgggcttcctgtggc
catgaatggaatacagaaaactgtgtggaatttcaaaaacttaatatgagcaactgcagt
caagtctctttacaaaatgccacctctccagtgatggaattctgggagcgaagggtgctg
gcaatttctgatgggattgagcacattgggaacctgcgctgggagctcgccctgtgcctc
ctggctgcttggactatctgctatttttgcatctggaaagggaccaaatccactggaaag
gtcgtgtatgtaacagccacattcccctacatcatgctgatgatcctcctgatccggggg
gtgacgttacccggcgcttccgaggggatcaaattctacctttatcccgacatctcccgg
ctctctgacccacaggtgtgggtggatgctggcacacagatctttttctcctacgccatc
tgcttggggtgcctgacagccctggggagctacaacaactacaacaacaactgctacaga
gactgcatcatgctctgctgcttgaacagtggcacaagctttgttgctggttttgctatc
ttttcagttcttggatttatggcttatgagcaaggcgtgcccattgcagaagttgcagaa
tcaggaccaggacttgcattcattgcttaccctaaagctgtcaccatgatgcctctgtct
cctctgtgggcagctctgttcttcatgatgctcatcttcctgggactggacagtcagttt
gtgtgtgtggaaagcatcgtgacagctgtggtggacatgtaccccaaggtgttccgcagg
ggctacaggagggagctgctcatcctcggcctctccatcgtgtcctacttccttggcctc
atcatgctgactgagggtgggatgtatgtctttcagctctttgactcctatgcagccagt
gggatgtgcctgctctttgttgccatatttgagtgtgtctgcataggctgggtgtacggc
agcaatcgcttttatgataacatcgaagacatgattggctacaaacccgtgtcgttgatc
aaatggtgctggatggtcctaactccaggtatttgtgcaggaatcttcatctttttcctg
gtgaaatacaagcccctgaaatacaacaatgtgtacatctaccctgactggggctatggc
atagggtggatgatggccctctcctccatggtctgcatcccactgtggatctgcatcaaa
ctctggaagacagaaggcaccttcctggagaaattcaggaagttgattacacctagctca
gacctgaaaatgcggggcaagctgggaggaggagcctacattgcagcaataaatgactgc
gacgccaaactgaaaggagatggcaccatttccaccatcacagaaaaggagacacatttc
tga
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