Corallococcus coralloides: COCOR_03412
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Entry
COCOR_03412 CDS
T01780
Name
(GenBank) nuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ccx
Corallococcus coralloides
Pathway
ccx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
COCOR_03412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccx03400
]
COCOR_03412
Enzymes [BR:
ccx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
COCOR_03412
DNA repair and recombination proteins [BR:
ccx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
COCOR_03412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AFE05213
UniProt:
H8MJ97
LinkDB
All DBs
Position
4226949..4227746
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AA seq
265 aa
AA seq
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MLLKVMTLNILMGGEERMPLLLALITRENPDVLVLQECLGWEDGERLRQVAAALGLPATD
AHVRLGTARPRPSGSRYHVAVASRLPLRSARAHANAHFIGHCLLECELETGAEPLTLFAA
HFDAHQEALRFVEARYLRSLIDPAAFGARDFILAGDLNSLSRADPYPVDLADHVRRARVD
KYGHPPRFDVIDDLESFGWLDTLRLKPGSSQWVTARRQREGEAIDFRTDYVFTSPALARR
LIAAHVVDVGSASDHHALTASFSDA
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgaaggtgatgacgctcaacatcctgatgggaggcgaggagcggatgccgctg
ctcctggcgctcatcacccgtgagaacccggacgtgctcgtgctgcaggagtgcctgggt
tgggaggacggcgagcggcttcgtcaggtcgccgccgcgctcggcctccccgccaccgac
gcccacgtgcggctgggcaccgcgcgtccccgtcccagcggcagccgctaccatgtcgcc
gtcgccagccgcttgcccctgcgctcggcccgcgcccacgccaatgcccacttcatcggc
cactgcctcctcgaatgcgagctggagacgggtgcggagccgctgaccctctttgcggcc
cacttcgacgcgcaccaggaggccctgcgcttcgtggaggctcgctacctgcgctccctg
atcgaccccgcggccttcggtgcgcgggacttcatcctggccggggacctcaactcgctg
tcgcgcgcagacccctatcccgtggacctggccgatcacgtccgccgtgcccgggtggac
aagtacggccacccgccacgcttcgacgtcatcgatgacctggagtccttcggctggctg
gacacgctgcgcctcaagccaggctcctcccagtgggtcaccgcccggcgccaacgcgag
ggcgaggccatcgacttccgcaccgactacgtcttcacctcacccgcgctggcccggcgg
ctcatcgcggctcacgtggtggacgtgggctcggcctccgaccaccacgccctgaccgcg
agcttcagcgacgcgtga
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