KEGG   Corallococcus coralloides: COCOR_06404
Entry
COCOR_06404       CDS       T01780                                 
Symbol
xylR1
Name
(GenBank) sigma-54 dependent transcription regulator
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
ccx  Corallococcus coralloides
Pathway
ccx02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ccx00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    COCOR_06404 (xylR1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:ccx02022]
    COCOR_06404 (xylR1)
Two-component system [BR:ccx02022]
 NtrC family
  HydH-HydG (metal tolerance)
   COCOR_06404 (xylR1)
SSDB
Motif
Pfam: Sigma54_activat XylR_N Sigma54_activ_2 HTH_8 V4R AAA_5 AAA_16 AAA Mg_chelatase HTH_7 AAA_2 bpMoxR HTH_30 AAA_3 HTH_28 AAA_22 AAA_19 HTH_Tnp_IS1 HTH_50 AAA_7
Other DBs
NCBI-ProteinID: AFE10669
UniProt: H8MRM3
LinkDB
Position
8070067..8071707
AA seq 546 aa
MAGLEGLDLKELLAFEPKGGVIRFAGQRALLMDPVTLGLLRKELIGMLGMTAARGIFTRL
GYAHGWRTAEAMKTAVPWKDEAEWRRSGGRLHTLMGQVRVERIERTAQDGPEPFAEAQWS
DSYEAEQHLLHLGQAEEPVCWSLTGFASGYLSYCNGKQIYCAELKCVGKGDAFCHIVGRP
EAEWSTECTEFLRFYETQCMEGVLGQVTEALRQAERKLRAKRQSLARVSGVTEDPTGMVA
RSEAMQRVLNLARRSAKVDTTVLVTGESGVGKERIARLIHDESGRSHKAFIAVNCAAVTE
SLLESELFGHAKGAFTGATHDRPGLFEAAHGGTLFLDEVGEVPPAMQAKLLRALQEREVR
RVGENTSRKVDVRVVAATNRELSEEVRLGRFRQDLFYRLRVIELRIPPLRERREDILPLA
RLLLAETGERLGRRVNGLSPDAADQLLRYPWPGNVRELGNAVERAVALCEGPRLERDDLP
EEVRAAPPSLVPSGNPRRLEDMEKEYILAVLAQNGGNRSRTAEQLDIGVATLYRKLKQYG
HPEAAH
NT seq 1641 nt   +upstreamnt  +downstreamnt
gtggcgggtctggaaggtttggacttgaaggagctcctggcgttcgagccgaagggcgga
gtcatccgcttcgccggccagcgggcgctgttgatggacccggtgacgctggggctcctg
cgcaaggagctcatcgggatgctggggatgacggccgcgcgcggcatcttcacgcggctg
ggctacgcgcacggctggcgcacggcggaggcgatgaagaccgcggtgccgtggaaggac
gaagcggagtggcgccgctcgggcggccggctgcacacgctgatgggccaggtgcgcgtg
gagcgcatcgagcgcacggcccaggacggcccggagcccttcgcggaagcgcagtggagc
gactcctatgaggccgagcagcacctgctccacctgggccaggcggaggagcccgtgtgc
tggagcctcaccggcttcgcgtccggctacctgagctactgcaacggcaagcagatttac
tgcgcggagctcaagtgcgtgggcaagggcgacgcgttctgccacatcgtgggccgcccg
gaggcggagtggagcaccgagtgcacggagttcctgcgcttctatgagacgcagtgcatg
gagggcgtgctcgggcaggtgacggaagccctgcggcaggcggagcgcaagctgcgcgcg
aagcgccagtcgctggcgcgcgtgtccggcgtgacggaggaccccacgggcatggtggcc
cgctcggaggccatgcagcgcgtgctcaacctggcgcggcgctcagccaaggtggacacc
acggtgctcgtcaccggcgagagcggcgtgggcaaggagcgcatcgcccggctcatccat
gacgagtccggccgctcgcacaaggccttcatcgccgtgaactgcgccgcggtgacggag
agcctcctggagagcgagctgttcggccacgcgaagggcgccttcaccggcgccacgcac
gaccggcccggcctcttcgaggcggcgcacggaggcaccctcttcctggacgaagtgggc
gaagtgcctcccgccatgcaggccaagctgctgcgcgccctccaggagagagaagtgcgc
cgcgtgggagagaacaccagccgcaaggtggacgtgcgcgtggtggccgccaccaaccgc
gagctgtccgaggaggtccgcctgggccgcttccgccaggacctcttctaccggctgcgc
gtcatcgagctgcgcatcccgcccctgcgcgagcgccgcgaggacatcctgcccctggcg
cgcctgctgctggcggagaccggcgagaggctgggccgccgcgtgaatggcctgtccccg
gacgcggcggatcagctgctgcgctacccctggccgggcaacgtgcgcgaattgggcaac
gccgtcgagcgcgcggtggcgctatgcgaaggcccgcgcctggagcgcgacgatttgccg
gaagaggtgcgcgccgcgccgcccagcctggtccccagcggcaacccgcgccggctggag
gacatggagaaggagtacatcctcgcggtgctggcgcagaacggcggcaaccgctcacgc
accgcggagcagttggacatcggggtggccacgctctaccggaagctcaagcagtacggc
cacccggaagccgcgcactga

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