Entry |
|
Symbol |
xylR1
|
Name |
(GenBank) sigma-54 dependent transcription regulator
|
KO |
K07713 | two-component system, NtrC family, response regulator HydG |
|
Organism |
ccx Corallococcus coralloides
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:ccx00001]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
COCOR_06404 (xylR1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:ccx02022]
COCOR_06404 (xylR1)
Two-component system [BR:ccx02022]
NtrC family
HydH-HydG (metal tolerance)
COCOR_06404 (xylR1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
8070067..8071707
|
AA seq |
546 aa
MAGLEGLDLKELLAFEPKGGVIRFAGQRALLMDPVTLGLLRKELIGMLGMTAARGIFTRL
GYAHGWRTAEAMKTAVPWKDEAEWRRSGGRLHTLMGQVRVERIERTAQDGPEPFAEAQWS
DSYEAEQHLLHLGQAEEPVCWSLTGFASGYLSYCNGKQIYCAELKCVGKGDAFCHIVGRP
EAEWSTECTEFLRFYETQCMEGVLGQVTEALRQAERKLRAKRQSLARVSGVTEDPTGMVA
RSEAMQRVLNLARRSAKVDTTVLVTGESGVGKERIARLIHDESGRSHKAFIAVNCAAVTE
SLLESELFGHAKGAFTGATHDRPGLFEAAHGGTLFLDEVGEVPPAMQAKLLRALQEREVR
RVGENTSRKVDVRVVAATNRELSEEVRLGRFRQDLFYRLRVIELRIPPLRERREDILPLA
RLLLAETGERLGRRVNGLSPDAADQLLRYPWPGNVRELGNAVERAVALCEGPRLERDDLP
EEVRAAPPSLVPSGNPRRLEDMEKEYILAVLAQNGGNRSRTAEQLDIGVATLYRKLKQYG
HPEAAH |
NT seq |
1641 nt +upstreamnt +downstreamnt
gtggcgggtctggaaggtttggacttgaaggagctcctggcgttcgagccgaagggcgga
gtcatccgcttcgccggccagcgggcgctgttgatggacccggtgacgctggggctcctg
cgcaaggagctcatcgggatgctggggatgacggccgcgcgcggcatcttcacgcggctg
ggctacgcgcacggctggcgcacggcggaggcgatgaagaccgcggtgccgtggaaggac
gaagcggagtggcgccgctcgggcggccggctgcacacgctgatgggccaggtgcgcgtg
gagcgcatcgagcgcacggcccaggacggcccggagcccttcgcggaagcgcagtggagc
gactcctatgaggccgagcagcacctgctccacctgggccaggcggaggagcccgtgtgc
tggagcctcaccggcttcgcgtccggctacctgagctactgcaacggcaagcagatttac
tgcgcggagctcaagtgcgtgggcaagggcgacgcgttctgccacatcgtgggccgcccg
gaggcggagtggagcaccgagtgcacggagttcctgcgcttctatgagacgcagtgcatg
gagggcgtgctcgggcaggtgacggaagccctgcggcaggcggagcgcaagctgcgcgcg
aagcgccagtcgctggcgcgcgtgtccggcgtgacggaggaccccacgggcatggtggcc
cgctcggaggccatgcagcgcgtgctcaacctggcgcggcgctcagccaaggtggacacc
acggtgctcgtcaccggcgagagcggcgtgggcaaggagcgcatcgcccggctcatccat
gacgagtccggccgctcgcacaaggccttcatcgccgtgaactgcgccgcggtgacggag
agcctcctggagagcgagctgttcggccacgcgaagggcgccttcaccggcgccacgcac
gaccggcccggcctcttcgaggcggcgcacggaggcaccctcttcctggacgaagtgggc
gaagtgcctcccgccatgcaggccaagctgctgcgcgccctccaggagagagaagtgcgc
cgcgtgggagagaacaccagccgcaaggtggacgtgcgcgtggtggccgccaccaaccgc
gagctgtccgaggaggtccgcctgggccgcttccgccaggacctcttctaccggctgcgc
gtcatcgagctgcgcatcccgcccctgcgcgagcgccgcgaggacatcctgcccctggcg
cgcctgctgctggcggagaccggcgagaggctgggccgccgcgtgaatggcctgtccccg
gacgcggcggatcagctgctgcgctacccctggccgggcaacgtgcgcgaattgggcaac
gccgtcgagcgcgcggtggcgctatgcgaaggcccgcgcctggagcgcgacgatttgccg
gaagaggtgcgcgccgcgccgcccagcctggtccccagcggcaacccgcgccggctggag
gacatggagaaggagtacatcctcgcggtgctggcgcagaacggcggcaaccgctcacgc
accgcggagcagttggacatcggggtggccacgctctaccggaagctcaagcagtacggc
cacccggaagccgcgcactga |