Capnocytophaga cynodegmi: CGC48_01380
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Entry
CGC48_01380 CDS
T05499
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
ccyn
Capnocytophaga cynodegmi
Pathway
ccyn00541
Biosynthesis of various nucleotide sugars
ccyn01100
Metabolic pathways
ccyn01250
Biosynthesis of nucleotide sugars
Module
ccyn_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ccyn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CGC48_01380
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ccyn01005
]
CGC48_01380
Enzymes [BR:
ccyn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
CGC48_01380
Lipopolysaccharide biosynthesis proteins [BR:
ccyn01005
]
Lipid A
CGC48_01380
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
DUF5091
NeuB
PHP
Motif
Other DBs
NCBI-ProteinID:
ATA69235
UniProt:
A0A250EBU7
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Position
complement(286112..286909)
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AA seq
265 aa
AA seq
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MSNKESNFFLLAGPCAIEGEEMAMQIAERIVSITDKLNIPYVFKGSFKKANRSRIDSFTG
IGDEKALKILEKVGKTFGVPTVTDIHEVSDADMAAQYVDVLQIPAFLVRQTDLVVAAAKT
GKVINLKKGQFMSPESMKHAVQKVIDSGNNSALITDRGTMFGYQDLIVDFRGIPVMRSYA
PVIMDVTHSLQQPNQTSGVTGGRPEMIETIARAAVVNNVDGLFIETHFDPANAKSDGANM
LHLDLLEGLLTRLTAIRQTILSFEN
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
gtgtctaacaaagaaagtaattttttccttttggcaggtccttgtgctattgaaggagag
gaaatggcgatgcaaattgccgaaagaatagtttctatcacggataaactaaacattccg
tatgtttttaaaggtagttttaagaaggcaaatcgtagtcggatagattcttttacaggt
attggagacgaaaaagctttgaaaattcttgaaaaagtaggtaaaacattcggtgtgccc
acagttactgatattcacgaagttagtgatgctgatatggctgctcaatatgttgatgta
ctgcaaattccagcttttttagtacgccaaaccgatttggtagttgcagcggccaaaaca
ggtaaggtaatcaatttaaagaaaggacaatttatgagtcctgaaagtatgaaacacgcc
gttcagaaagtgattgatagcgggaacaatagtgctttaatcactgacagaggaactatg
tttggctatcaggatttaattgttgattttagaggaattcctgtgatgcgttcgtatgct
cctgttattatggatgttacgcattctttacaacaacccaatcaaacaagcggagtgact
ggaggacgcccagaaatgattgaaactattgctcgtgcagctgttgttaataacgtagat
ggattgtttatcgaaactcattttgaccctgcaaatgcaaaaagtgatggggctaatatg
cttcatcttgatttgcttgaaggtcttttaacaagattaacagcaatcagacaaacaatt
ttatcatttgagaattag
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