Clostridioides difficile CD196: CD196_2511
Help
Entry
CD196_2511 CDS
T00997
Symbol
appF
Name
(GenBank) oligopeptide ABC transporter, ATP-binding protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CD196_2511 (appF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdc02000
]
CD196_2511 (appF)
Transporters [BR:
cdc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CD196_2511 (appF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
SMC_N
AAA_29
PRK
FtsK_SpoIIIE
AAA_16
nSTAND3
RsgA_GTPase
ATP-synt_ab
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
CBA64814
UniProt:
A0A0H3N4Q9
LinkDB
All DBs
Position
complement(2918426..2919397)
Genome browser
AA seq
323 aa
AA seq
DB search
MKKEESLLKVEGLKKYFEVKSGLFDKEIKCVKAVDGISFDLKKGETLAIVGESGCGKSTA
GRTILRLIEKTEGKVEFNGVDIYKLEKEELRKLRPKMQMIFQDPYSSLNPRLNVEQIISE
AVIEHNLVPKNEIKDNILNVVESCGLSKYHLNRKPDEFSGGQRQRIGIARALALNPEFIV
CDEPVSALDVSIQSQIINLLMDLQDKYKLSYLFISHDLSVVNHIAHRVCVMYLGSIIEIA
TKGELYLHSQHPYTRALMSAVPVQDPTIKKNRIILKGDIPSPTNPPSGCKFHTRCPYCKE
ICKKEIPVLKEISRNHFVACHLV
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaagaagagagtttattaaaagtagaaggtcttaaaaagtactttgaagttaaa
tctggattatttgataaggaaattaaatgtgtaaaggcagtagatggaatttcttttgat
ttaaaaaaaggagaaactttggctatagttggagaatcgggatgtggaaaatcaactgca
ggaagaaccatccttagattaattgaaaaaactgaaggtaaagttgaatttaatggtgta
gatatatataagttagagaaggaagaacttagaaagttaagacccaaaatgcaaatgata
tttcaagacccatatagttcattaaatccaagattaaatgtggaacaaataatatcagag
gcagttatagaacataatttagtgccaaagaatgaaataaaagataatatattaaatgtt
gtagaaagttgtggtctttctaagtaccatttaaatagaaaaccagatgagttttctgga
ggtcaaagacagaggataggtatagcaagagcattagcattaaatccagaatttatagtt
tgtgatgaacctgtttctgcactagatgtttctattcaatctcaaattataaatttactt
atggatttacaggataaatataaactctcatatttatttatatctcatgatttgagtgta
gtaaatcatattgcacatagagtttgtgttatgtatctaggttctataatagaaattgca
actaaaggagaactttacttacattctcaacatccatatacaagagcacttatgagcgca
gtaccagtacaagaccctacaattaagaaaaatagaattatattaaaaggagacatacca
tctccaacaaatccaccaagtggatgtaagtttcatacaagatgcccttattgtaaggaa
atatgcaaaaaagagattccagttttaaaagaaatatcaagaaatcattttgttgcatgc
catctagtatag
DBGET
integrated database retrieval system