Cryptococcus decagattii: 89987747
Help
Entry
89987747 CDS
T10966
Symbol
IAS62_000972
Name
(RefSeq) peptide chain release factor 1, archaeal and eukaryotic forms
KO
K03265
peptide chain release factor subunit 1
Organism
cdec Cryptococcus decagattii
Pathway
cdec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
89987747 (IAS62_000972)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdec03019
]
89987747 (IAS62_000972)
03012 Translation factors [BR:
cdec03012
]
89987747 (IAS62_000972)
Messenger RNA biogenesis [BR:
cdec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
89987747 (IAS62_000972)
Translation factors [BR:
cdec03012
]
Eukaryotic type
Release factors
89987747 (IAS62_000972)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
DUF3440
Motif
Other DBs
NCBI-GeneID:
89987747
NCBI-ProteinID:
XP_064718922
LinkDB
All DBs
Position
2:join(341312..341329,341383..341400,341485..341648,341900..342148,342214..342776,342847..343146,343228..343235)
Genome browser
AA seq
439 aa
AA seq
DB search
MSSTEESDQAIEIWRYRKLLNMLANSRGAGTSCITLILPPRSQISQASNMLTTEYGTASN
IKSRVNRLSVLSAITSTQQKLKLYNRVPDNGLCVFVGTVLNDEGKEKKISFALEPFKPIN
TSLYMCDSRFHVEALEELLENDSKWGFIVIDGNGSLFGTLSGNTREVIHKFTVDLPKKHG
RGGQSALRFSRLREEARRNYVRKVAELAVQHFITADKVNVAGLVLAGSAELKTDLSGSDL
FDPRLLAKVVKVVDVSYGGENGFNQAIELAADSLANVKFVQEKKLIQKYFDEIALDTGKY
CFGISDTLKALEMGAVETLIVWENLEMTRNTLRNAAGEEIIVFSTPADKDREKFMDKSTG
LEMEQAAEPQPVLEWFAEKYREFGATLEFVTNKSQEGSQFVKGFGGIGGLLRYKVDFNDL
GDLEDDDDEFYGSDDDSDI
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcacagaagagtctgatcaggctatcgaaatatggaggtaccgcaagctgctg
aatatgcttgccaactcccgaggtgctggtacctcttgtatcacccttattcttccccct
cgatcacaaatttctcaggcgtctaatatgttgactactgaatacggtaccgcttccaac
atcaagtctcgtgttaaccgactttctgtcctttccgctatcacctctactcaacaaaaa
ttgaagctttacaaccgagttcccgacaacggtctttgtgtctttgtcggtaccgttttg
aacgatgaaggcaaggagaagaagatttcctttgcccttgaacctttcaagcctatcaat
acctctttgtatatgtgtgatagcagattccacgttgaggcgctggaggagctcttagag
aatgactctaagtggggttttattgtcattgacggtaacggatccctcttcggtactctc
tctggtaacacccgtgaagtcatccacaaattcactgtcgaccttcccaagaaacacggc
cgaggtggtcaatccgctcttcgtttctctcgtctccgagaagaagctcgtcgaaactat
gtccgaaaagtcgccgaacttgctgttcagcacttcattaccgctgataaggttaacgtt
gcgggtctggtcctcgctggtagcgccgagctcaagaccgatttgagtggaagtgacctc
tttgacccccgattgctcgccaaggtcgtcaaggttgttgatgtatcttatggcggtgaa
aatggctttaaccaggctattgagcttgccgccgattcgcttgccaacgtcaagtttgta
caggagaagaagcttatccaaaagtactttgatgagattgcactggacactggcaagtac
tgctttggtattagtgatacacttaaggcgcttgagatgggtgccgtggagactctgatc
gtatgggagaacttggaaatgacccggaacactttgcgtaatgccgccggtgaggaaatt
atcgtcttctctacccccgccgacaaggaccgagagaagtttatggacaaatccaccggt
ctcgagatggaacaagccgcggaaccccaacccgtgctcgaatggtttgccgaaaagtac
cgcgaatttggtgccaccctcgaattcgtcaccaacaagtctcaggaaggctcgcaattt
gtgaaaggatttggtggtattggcgggttgttgagatacaaggttgatttcaatgatttg
ggtgatttggaagatgatgatgatgagttttacgggtctgacgatgacagtgacatttga
DBGET
integrated database retrieval system
