Cryptococcus decagattii: 89992859
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Entry
89992859 CDS
T10966
Symbol
IAS62_006090
Name
(RefSeq) uncharacterized protein
KO
K12828
splicing factor 3B subunit 1
Organism
cdec Cryptococcus decagattii
Pathway
cdec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
89992859 (IAS62_006090)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdec03041
]
89992859 (IAS62_006090)
03036 Chromosome and associated proteins [BR:
cdec03036
]
89992859 (IAS62_006090)
Spliceosome [BR:
cdec03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
89992859 (IAS62_006090)
Complex B
89992859 (IAS62_006090)
Complex C
U2 SnRNP specific factors
89992859 (IAS62_006090)
Chromosome and associated proteins [BR:
cdec03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
89992859 (IAS62_006090)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
SF3b1
TPR_DNAAF5
HEAT_EF3_N
HEAT_2
Vac14_Fab1_bd
HEAT
HEAT_ECM29
HEAT_MROH2B_C
Adaptin_N
TPR_IPO5
Htt_N-HEAT_1
XMAP215_CLASP_TOG
RRP12_HEAT
MMS19_C
Motif
Other DBs
NCBI-GeneID:
89992859
NCBI-ProteinID:
XP_064723959
LinkDB
All DBs
Position
12:complement(join(313976..314094,314148..314606,314656..314955,315006..315079,315131..317643))
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AA seq
1154 aa
AA seq
DB search
MSDEEYPQLQSYTAPREILDEHAELADEDDTPDAFQDKAKSKQVAARQSDYHLRRFNRTD
GQGEGEDESYEERMRRINLEKEEEKVRRYKEKMEKEEKERGEMQVDDKTPPRELIGDETP
PRKALIGDETPPRAQAGDATPPRKKRRWDSEPEIKQEVKEEVKEEVKEEEPKKRRSRWDQ
TPGEAPPEKKRSRWDQTPAQTASSSVLAAPTNLAKPSGIVLVEDKRYRRMTDEELDSLLP
GSEEGYVVVPVPHDYHPAPSVRKMVPQQAEAGFMMQDETDAARARAAAGGLQGTTEQTEI
DGIGTLQFLKPEDTQYFAKVLGEGGGEENDAEYTLEELKERKIMRLLLKIKNGTPPVRKT
ALRQITDRAREFGAGPLFDKILPLLMERTLEDQERHLLVKVIDRVLYKLDDLVRPYVHKI
LVVIEPLLIDEDYYARVEGREIISNLAKAAGLAHMISTMRPDIDHVDEYVRNTTARAFSV
VASALGIPALLPFLRAVCRSKKSWQARHTGIRIIQQIAIMSGCAVLPHLRNLVDAIADGL
KDEQQKVRTMTALALAGLAEAAAPYGIESFDNVLKPLWLGIRQHRGKTLAAFLKAIGYII
PLMDPEYAGYYVRECMPILIREFQTSDEEMRRIVLQVIKQCASTEGVTPSYIKEEVLPEF
FKAFWVRRMALDKRNYKQLVETTVELANKAGVAEIVGRTVNDLKDESEPFRKMVMETITK
VVSNIGAADIDERLEVLLIDGIIYSFQEQTFEDTVMLDGFATVVASLGPRVKPYLPQIVS
MILWRLTNKSAKVRMLAADLTTKLAPIIKSCKEVVLLSKLGVVIFEQLGEEYPDALGSLI
AAEGAIANVVGMTEMNPPVKDLLPRMTPILRNRHEKVQEATINLIGRIADRGAEYVPAKE
WMRICFELLDLLKAHKRAIRRAAVNSFGYIAKAIGPQDVLSVLLTNLKVQERQSRVCSTV
AIAIVAETCGPFTCIPAILNEYRTPELNVRNGCLKALAFVFEYVGEMSKDYIHSVIGLLE
DALTDRDHVHRQTACAIVKHLAIGVAGLGYEEALTHLLNLVWPNIFETSPHVIGGVMDAI
EAMRLGIGSGVVLSYVLQGLFHPARRVREVYWRMYNTLILGSSDAMVPFYPALGSESDLA
SGQDYTRHQLMMWI
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgaagagtacccacagctccagtcatacacggcgccccgggagattctggac
gagcacgccgagctcgcagatgaggacgacacgcctgatgccttccaggacaaggcaaag
tcaaagcaggtggctgctagacaaagcgactaccacttgcgtaggttcaacaggacagac
ggacagggtgagggcgaggatgaaagctatgaggaacgtatgaggagaatcaatttggag
aaggaggaggaaaaggtgaggagatacaaggaaaagatggagaaggaagagaaggagaga
ggagaaatgcaagtggacgacaagaccccgccgagggaactcataggtgatgaaaccccg
ccacgcaaggctcttattggtgatgagacaccccccagagctcaggctggtgatgctact
cctccccgcaagaagcgaagatgggattccgagcccgagattaagcaagaagttaaggaa
gaggttaaggaggaggtcaaggaagaagagcccaagaaacgtcgctctcgatgggatcag
accccaggcgaagcaccaccagagaaaaagcgttcccgatgggatcaaacccctgcgcag
actgcctcctccagtgttctcgctgctcctactaacctcgccaaaccttctggtattgtc
ctggtcgaagacaaacgataccgccgaatgacagacgaagagctcgactcattgcttcct
ggctcagaagaaggttatgttgtggtccctgtaccgcacgactaccaccccgccccttca
gttcgtaagatggttccccaacaggctgaggctgggtttatgatgcaggacgaaacggat
gctgcacgagcgcgcgcagctgctggtggtcttcagggcacaactgagcaaacagaaatt
gatggaattggaactctccaattcctcaaacccgaagatacccagtactttgcaaaggtg
ctcggcgaaggcggtggtgaagaaaacgacgcagaatacactcttgaagagctcaaagaa
cgaaagattatgcgacttttgctcaaaatcaaaaatggtacccctcccgtccgtaaaacc
gctttgcgtcaaatcaccgatcgcgcgcgagagtttggcgcaggtccattatttgacaaa
attctccctcttcttatggagcgtacgctcgaagatcaagaacggcatttgcttgtcaag
gtcatcgaccgtgtcctctacaagcttgatgaccttgttcgtccatatgtccacaagatc
cttgtcgtcatcgagcctcttcttatcgatgaggattactacgcacgagtcgaaggtcga
gaaatcatttccaacctcgccaaggcggccggtctcgcccacatgatctccaccatgcgt
cccgatatcgaccacgttgatgaatacgttcgcaacaccactgccagagccttttcggtt
gtagcctccgccctcggtatccctgctcttcttcctttccttcgtgccgtctgtcgatca
aaaaaatcatggcaagcgagacataccggtatccgtattatccaacaaatcgccatcatg
tcaggctgcgctgtccttcctcatcttcgtaatctcgtcgacgccattgccgatggtttg
aaagatgagcaacaaaaagttcgaactatgaccgctctcgcccttgctggtcttgccgag
gctgccgcgccatacggtatagagtcttttgacaatgttctcaaacccttgtggctcggt
atcaggcagcaccggggtaagacccttgccgccttcctcaaggccatcggttacattatc
cctcttatggaccccgagtacgccggatactatgtacgagagtgtatgcctattttgatc
cgggaatttcagacctccgatgaagaaatgagaaggattgtcttgcaagttatcaagcag
tgtgcctctaccgagggtgttactccttcatacatcaaagaagaggttcttcccgaattc
ttcaaggcgttctgggtcaggcgtatggcgttagacaagaggaattataagcagcttgta
gagaccaccgtcgagcttgccaacaaggctggtgtcgcagagatcgtcggcaggacagtc
aatgacttgaaggatgaaagtgaacctttccgaaagatggttatggagaccatcaccaag
gtggtttccaacattggtgctgccgatattgacgaacgtctcgaagtcttgttaattgat
ggtattatctactccttccaggagcagacttttgaagacactgtcatgcttgacggtttc
gccaccgttgtcgcctctcttggtcctcgtgtcaagccttaccttccacaaatcgtttcc
atgatcctttggagattgactaataagtctgccaaggtccgaatgttggccgctgatctc
accaccaaattggcaccgattatcaagagctgcaaggaggttgttttgttgagtaaattg
ggtgttgttatcttcgagcagttgggtgaagagtatcccgacgctttgggaagtcttatc
gctgctgagggagctatcgcgaacgtcgtcggtatgacagagatgaacccgcccgtcaag
gatctcctcccccgaatgacccctatccttcgaaaccgacacgaaaaggttcaagaagcc
actatcaacttgatcggtcgtattgcagatcgaggtgccgaatacgtccctgctaaggaa
tggatgcgaatctgttttgagcttctcgacctactgaaggcccacaagcgtgcgattcga
cgagcggctgtcaactcgttcggttatatcgcaaaggctattggtcctcaggatgtgttg
agtgttctattgacaaacttgaaggtgcaggagcgacagagtagggtttgtagtactgtc
gctatcgccattgtcgccgaaacatgtggtcccttcacgtgtatccccgctatccttaac
gaataccgaactcctgaacttaacgttcgaaacggttgtctcaaggctcttgctttcgtt
ttcgaatacgtcggcgaaatgtctaaagattatattcactcagtcattggcctactcgaa
gatgctctcactgaccgagatcacgtccaccgacaaacggcttgtgccattgtcaagcac
ttggctattggtgtcgccggcttgggttatgaagaggcgctcacacatttgttgaacctt
gtttggccaaacatctttgaaacgagtcctcacgttattggcggtgtgatggacgctatt
gaagcgatgagacttggtattggatcaggtgtcgtgttgagttatgtgttgcaagggtta
ttccatcctgccagacgagtaagggaagtttattggagaatgtacaacactttgatcctt
ggatcatctgatgcaatggtgcctttctaccctgctctgggttcagaatccgatttggcg
tctggacaggactacacaaggcatcagctcatgatgtggatctag
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