Cryptococcus depauperatus: 91085854
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Entry
91085854 CDS
T10265
Symbol
L203_101641
Name
(RefSeq) uncharacterized protein
KO
K13174
THO complex subunit 5
Organism
cdep Cryptococcus depauperatus
Pathway
cdep03013
Nucleocytoplasmic transport
cdep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
91085854 (L203_101641)
09122 Translation
03013 Nucleocytoplasmic transport
91085854 (L203_101641)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdep03019
]
91085854 (L203_101641)
03041 Spliceosome [BR:
cdep03041
]
91085854 (L203_101641)
Messenger RNA biogenesis [BR:
cdep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
91085854 (L203_101641)
Spliceosome [BR:
cdep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
91085854 (L203_101641)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
KfrA_N
SEO_N
Motif
Other DBs
NCBI-GeneID:
91085854
NCBI-ProteinID:
XP_066067177
UniProt:
A0AAJ8M0D1
LinkDB
All DBs
Position
2:join(983440..983783,983836..983915,983964..984036,984087..984201,984247..984330)
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AA seq
231 aa
AA seq
DB search
MAIPSVIQDQDPADPLLLLPIPEQLPFSPVSGLPAIVSAIDAYLTDAVSSDVPSMPVIAS
VIRQATRNAQSLLNAARAGAAEAREELDQVDVRLREVEYERDRVRKETEKCLRYEPIHSA
MDSPSVETFFEKVEPSMIEQLSPTHEDHQQTLTITRLEHELEEILKREAQAAQLTKDRDA
YIRAKKEIKMKTDAVDVHLGNFAKTANAVGSKVKDVAEVHAPTVSVSSGPS
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggctattccatccgtcattcaagaccaggatccggctgatccacttcttcttctaccc
ataccagaacaactgccgttctctcccgtttccggactaccagctattgtatctgccatc
gatgcgtacctaactgatgctgtgtcctctgacgtgccatcgatgcctgttatcgcttct
gttattaggcaagctaccaggaacgcgcaatcgttgttgaatgcagcgagagctggagcg
gctgaagcaagagaagaattggatcaggttgatgtaagattgagagaagtagagtatgag
agagatcgggttaggaaggagactgaaaagtgtttacgctacgaacctatacacagtgcg
atggattcaccaagcgtagagaccttttttgagaaagtggaaccgagtatgattgaacag
ttatcgccaacacatgaggatcatcaacaaactcttaccataacgagattagagcatgaa
ctggaagagattctcaaacgagaagcccaggcggctcagctcacaaaagaccgagatgcc
tatattcgggccaagaaggagatcaagatgaagacagatgcagttgacgtccatctgggc
aatttcgcaaagacggccaatgctgtcggttcaaaagtcaaggatgtcgcagaagttcac
gccccgaccgtatcagtcagctctggtccctcataa
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