Colletotrichum destructivum: 87939682
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Entry
87939682 CDS
T10409
Symbol
CDEST_03179
Name
(RefSeq) Putative nuclear transport factor 2 domain, TAP (TAP-C) domain, UBA-like superfamily
KO
K14284
nuclear RNA export factor
Organism
cdet Colletotrichum destructivum
Pathway
cdet03008
Ribosome biogenesis in eukaryotes
cdet03013
Nucleocytoplasmic transport
cdet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
87939682 (CDEST_03179)
03015 mRNA surveillance pathway
87939682 (CDEST_03179)
03008 Ribosome biogenesis in eukaryotes
87939682 (CDEST_03179)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdet03019
]
87939682 (CDEST_03179)
03009 Ribosome biogenesis [BR:
cdet03009
]
87939682 (CDEST_03179)
Messenger RNA biogenesis [BR:
cdet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
87939682 (CDEST_03179)
mRNA cycle factors
Stress granule specific factors
87939682 (CDEST_03179)
Ribosome biogenesis [BR:
cdet03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
87939682 (CDEST_03179)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
TAP_C
LRR_NXF1-5
LRR_4
LRR_8
RRM_9
NTF2
LRR_9
UBA_8
Motif
Other DBs
NCBI-GeneID:
87939682
NCBI-ProteinID:
XP_062775389
UniProt:
A0AAX4I590
LinkDB
All DBs
Position
2:complement(join(3113977..3114012,3114067..3115500,3115677..3116177))
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AA seq
656 aa
AA seq
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MAPPRAPRSMTSQPTRDTRNSTVGAKTSRGGGIQKRRGGRTQVDRDGDLDMGSAAGGSGT
RRPNSRAAPADTNNSRPRGSTRSGAPSGKPGSKVHQAIARHLDTGDGNDLVSRRKPQSSG
LVWLTVKGLKESKAASNDDGGLRDLLMFLERKATTLSGRNKTVHIKKSSLRGDLVNIAAS
KEDAEEILKVNTFTFAGTQLEISDSDGSIAKANEASAAAQETKQKLQSIMSLRYDMENKL
LRLDALNQDEGLIQMGMLESKDRAEKLFKVMMRICDELFKTPQAKIDAIHSISLANNNID
TVAQVEEMADTFPDLKNLDLSGNQIVSVAGLWRWRQKLKKLETLYLTGNPLPVAEPKVVL
ELLHFFPKLQVLNGEQLTPERIAEIKAAGRPKPIPQRGPDFRDVAGIGEAFLLEFFLGFD
TDRTGLLAKYYDDNSQFSLAVDTHSVRDENLPQPLPWSSYIKQSRNLMKITTPAARAARL
ITGREATWNLWNDLPKTQHPDIKSDISKYIMDCHLLPGLADPTGQTAGGVDGMIISVHGQ
FEECDKSGKTGLRSFSRTFVLGPGRPNSNPIRVVSDMLSLRAYNPLPNIFVAEGQAPSAQ
EQEQRQAMIAELSKQTTMTPTYSEMCLSDVAWDFTRALAVFHEKKAQLPAEAFASV
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctccacgggctcctcgcagcatgacgtcgcagcctacgcgcgacacccgtaac
tctactgttggggccaagacgtcgcgcggtggcggcattcagaagcgccgcggtggcaga
acccaagtcgacagggacggagaccttgacatgggtagcgccgccggaggaagtggcaca
cgtcgaccaaatagtagagcagccccggctgacacgaacaactcgcgacctcggggatca
acaagatctggcgctccctccggcaagccaggctcgaaagtacaccaagcgattgcccga
cacttggacactggcgatggaaatgatctggtatcaaggaggaagccacagagctctggc
cttgtctggctgaccgtcaagggtctgaaggagagcaaggccgcaagcaatgacgacggc
ggtctacgtgatctgttgatgttcctggagcggaaagccaccaccctgtccggccgcaac
aaaacggtgcacatcaagaagtcgagtttgagaggggacttggtcaacattgcggcaagc
aaggaagatgcggaggaaattctcaaagtcaataccttcacgtttgctggaacgcagttg
gagatctctgatagtgacggatcgatcgccaaggcgaacgaagcatccgcggcagcgcaa
gagacaaagcagaagctccaaagcatcatgtcactccgttatgacatggaaaacaagctc
ttgagactggacgccctgaaccaagacgaaggcctgatacaaatgggaatgctggagtct
aaagacagggccgagaagctcttcaaggtcatgatgaggatttgcgacgagctcttcaag
acaccccaagccaagatcgatgccatccacagcatcagcctggccaacaataacatcgac
actgttgcgcaagtcgaggagatggcggatacgttccccgatctcaagaacctcgacctc
agcgggaaccagattgtgtctgtcgcgggcctgtggagatggcgccagaagctcaagaag
ctagagaccctgtacctgacgggaaacccactgccagtcgcggagcccaaggtggtgctc
gagctgttgcacttcttccccaagctgcaggtcctgaatggtgagcaattgacaccagaa
cggattgcggaaatcaaggcagcaggccgaccaaagccgattccccagcgcggacccgac
ttccgtgacgtagccggcatcggagaggccttcctgctcgagttcttcctcggcttcgac
acggaccgcacaggtctactagccaagtactacgacgacaacagccaattctctctggct
gtggatacccattccgtcagagacgagaatctgccacagccgcttccctggtcttcatac
atcaagcagtctcggaatctgatgaagattacgaccccagccgcccgagccgcgagactc
atcaccggaagggaggcgacgtggaacctctggaacgaccttccgaaaacacagcacccg
gacatcaagtcggacatcagcaagtacattatggactgccatctcctgcctggtctcgcc
gacccgaccggccagaccgccggcggagttgacggcatgatcatctccgtgcatggtcaa
tttgaagaatgtgacaagtccggtaagacgggtctccgaagcttttctcgcacattcgtc
ctgggacccggacgacccaacagcaaccccattcgcgtcgtgagcgacatgctctccctc
agggcttacaacccgctccccaacatcttcgttgccgagggccaagccccgtcagcgcaa
gaacaagaacagcgccaggccatgattgccgaactatcaaagcagacgacaatgacaccc
acatactcagaaatgtgcctgtcagacgtcgcgtgggacttcaccagggccttggcagtc
ttccacgagaaaaaggctcaattgccagccgaagcattcgccagcgtctag
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