Colletotrichum destructivum: 87947750
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Entry
87947750 CDS
T10409
Symbol
CDEST_11250
Name
(RefSeq) Putative CCR4-Not complex component, Not1, CCR4-NOT transcription complex subunit 1, domain 4
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
cdet Colletotrichum destructivum
Pathway
cdet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
87947750 (CDEST_11250)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdet03019
]
87947750 (CDEST_11250)
Messenger RNA biogenesis [BR:
cdet03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
87947750 (CDEST_11250)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
87947750 (CDEST_11250)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_HEAT
CNOT1_TTP_bind
Motif
Other DBs
NCBI-GeneID:
87947750
NCBI-ProteinID:
XP_062783457
UniProt:
A0AAX4ISK1
LinkDB
All DBs
Position
7:join(2312831..2313082,2313192..2313513,2313576..2319520,2319591..2319629)
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AA seq
2185 aa
AA seq
DB search
MVPQSRSGSFSPHPSQLLQTGAGHSPHTSQPAALSAGASPSTSSPTGPSPLVKIAVAQVY
LLLGAIKEDKDRAKWEIQAEQLQKLIDEHGMEVFTKYFARLVAVHAGHIFHGQPRAGANG
NFHLLVTEMQKISHDVHQANKIAESIETGTEDIFRDFDMSTFMEAFKLDALEKTMLALAF
KMGSRSDLKTKADAILSTNFPTFVNILARRDIEEHSDLTDQFIAVLVDRFIQYQPPNFNA
ASKAELAYKVQARWHGDQAPPPSEVLAALDLVRVLADKPPNALATYIQRTGIEFTRDEEI
CLSHLQNRPQNVQLSEEQVSIALMYSTISQSPLYDPSILAASLRRVLPPSFRWQDVVSYL
DQRSARISSQQFLRLYNSLLPIAQDDQTFDIQKLWGGNWEHPETQLSFICAFASLQPDQL
DASTIPGLVPTLTLDTYAQSPPEVQQRAAFAVKHALVSVEALSAVFHVALHSVHASQSVE
AKRLFQEVVVPNLDIFVVSAFGVPKPWPTMAVDTLNSLFESFLYKRSTEYDFVLDSLWKK
DKEWVIQRLIEAHAIKPTDLPLIFEHAMKHKWLDELVYLPNGFGLDLAALSHAEGYLDLV
SWARRNSERSNEIARSLLQFLLIKANLELQYQRPPDGQPAVKSSTTLQVRTVAAFLQILE
DFLPKTPLQDLIMVQRSCITVYPRLINYGEGFDDIIDANGKDGNALPPAANSKMEEHYKK
MYGDEIQVRNIVEILDRYKHSRDSLDQDVFACMIHGLFDEYAHYVDYPLEALATTAVLFG
GIISHKLISDLPLKIGLGMILEAVRDYLPEDSMYKFGLQALMQLFSRFREWPGFCRQLLQ
IPGLQGTEAWKKAEDVVRDHEEELVRSRNGIAAPAHGLPFNSEPLTNGNTTEVRSTERQP
PPFTSINASEHSPGVDCEEPSSDTQGKIQFVLNNLTEMTLQTMCQELRDILEHRYQQWFA
SHLVEERAKMQPNYHQVYLELVRLFEDQVLWGEVLRETYVSVARMLNSEATMQNSTDRSH
LKNLGGWLGLLTLARDKPIKHKNIAFKQLLIEAHDTKRLIVVIPFVCKVLLQGVNSTVFR
PPNPWLMDIIHFLIELYHHAELKLNLKFEIEVLCKGLNLDHKSIEPSGEILNRATVEDTH
ELLSQDTLETFENLSLNGISTGVTTGLSPQVITASIPDLGPLIHIPPTNEMVVTATRLHE
IVRTALTRALQDIIQPVVDRSVTIAAISTQQMIHKDFATEPDETRVRTSAISMVKATAGS
LALVTSKEPLRANFTNYMRNLSNDLPQGLPEGTIIMCVNSNLDLACNIIEKQAEERAVPE
IEEMIEPELEARRRHRLQRPNEPYVDASLSRWAWTIPNPFKLSPSMGGLNPEQMAIYEDF
ARQPRTTTSSAPSHVPSASDATRSLANEVLQDQFSTVPSLGAATEPPAVQHLGSQIQQYA
PVHNGAMASTRPQTFPMDGRALIDRVQKLLMELQRVATEAREEHFADLPRPHPVLDVVDA
LVQHMIKASQTSEEFAIYAADQIIQIIFTQVEDNLALESLVHVLETLRKISGPTLNNRVT
ALFRQQPGSTFLTLPLLAALLRTDLLDWRNIDLSMSKVLQQRKEGSLEFLEQMVDLTLLG
SRPMALYGDFVRTLETAWSWIQDDPESPIGQRLKAKLSGPTLPQTAHQEDDSAIQQDQME
YVFDEWIHLCNNPNASENSAILFVQQMQIRGVIKTKDDLFLFIRIATDMSVDRFEHFLHT
TGTLTDAFLAIDALAKAINSFIRLHGETEPAPTPSRAAYLDSILAFVTLVLNHHHVQRSE
HFNQRVFHRLLSVLLYEISSTAEQLPEAERSEMFLKFAARLEDLGPKFLPGFVFGWLSLL
QHRAFLPTIMKDRAGWVAFTRLLQLLLEHVGEQVKAIEPSNVAREIYRATLKLLVILQHD
YSEYLAAHSHQLTASVPPHCKQLLNAILTANPAAHPKMPDPSFPGLQIDRLDEVRDSPDS
LDNSAVILRDSGLLEVLDHALQNGPSEDTLAHITRAIVESPRADTGFGHVPINANLPVIE
AVTLHVGNHAVEQSTQKGTDVFNPASSDVAVMSLLLHELPPEARYYLITSLTNQLRFPNA
HTNYFSRVLLEIFGQDMNDPEETEIRQQITRVLWERLIGYWPQPWGLMVTVVELLKNEKY
MFFDLPFVKSNPEVIERFHAILQRA
NT seq
6558 nt
NT seq
+upstream
nt +downstream
nt
atggtcccacaatcaagatcgggatcattctctccacatccttcacagttactgcagaca
ggagcagggcactcgccccatacatcgcaacccgctgcgttgagtgcgggcgccagtcct
agtacgagcagtccgacaggacccagtcccctggtcaaaatcgccgttgctcaagtttat
cttctccttggtgctatcaaggaggacaaggaccgcgcaaagtgggagatacaagcagaa
caattgcaaaagctcattgatgaacacggaatggaggtctttaccaagtatttcgcgcgc
ctcgtcgccgttcatgccggccacatcttccatggacagccacgggccggggccaatggc
aacttccatctgttggtgacggagatgcagaagatatctcatgacgttcaccaggccaac
aagattgccgaatccatcgaaacgggcacagaagacatattccgcgactttgatatgtct
acattcatggaggctttcaagttggatgccctggagaagacgatgctggcgttagccttc
aaaatggggtcaaggtccgaccttaagacgaaagctgatgctatcctgtccacgaatttc
cctacattcgtcaatatccttgcccgacgcgatatagaagagcattcggaccttacagac
caatttatcgccgtgctcgttgatcgcttcatccaataccagccacccaatttcaacgcg
gcatctaaggccgaacttgcgtacaaggtacaggcaaggtggcacggggatcaagcaccg
ccgccctccgaagtactcgcggcgctcgatctggtcagggtactggccgataaacctccg
aatgcccttgccacatacattcaaagaaccggcatcgagttcacccgagacgaagagatc
tgcttatcgcatctgcagaaccgcccgcagaatgttcaactgagtgaagagcaagtttcc
attgccctcatgtacagcacgattagtcagtccccgctctatgatccctcgatccttgcc
gcatctctacgtcgagttcttcctccgtctttcaggtggcaggacgtggtttcgtatttg
gaccagagatccgcccggatttcgtcccaacagttcctgcgcttgtacaactcgttgttg
ccaattgcacaagatgatcaaacgtttgacatccaaaagttgtggggtgggaactgggag
cacccagaaactcagctgtccttcatttgcgcattcgcctctctacaacccgatcagctt
gatgctagcaccattccgggcctggtaccgacgctcaccctagacacatatgcgcaatca
ccccccgaggttcaacaacgcgcagcgttcgccgtcaagcatgctttagtctcggtcgag
gcgctgtctgccgtatttcatgtcgccttgcactctgttcacgcgtcgcaaagcgttgaa
gccaagcgcctattccaagaggttgttgtgccaaatctggatatctttgtcgtctctgcg
ttcggagtaccaaagccttggccgaccatggcggtggatacgctgaattcccttttcgaa
agcttcttgtacaagcggtcaactgaatatgacttcgtcctcgacagtttgtggaagaag
gacaaggaatgggtgatccagcggttgatcgaggcccacgccatcaagccgaccgacctc
cctctgattttcgagcacgcaatgaagcacaagtggctcgacgagctcgtgtatctgccc
aacggttttggtctcgaccttgcagcgctttcacacgccgaaggttatttggacctggtc
agctgggctcgccgcaactccgagagaagcaacgagattgcccgctccttactgcagttc
ttactaatcaaagcgaatcttgaactgcaataccagcgccctcccgatggtcaacccgca
gtcaagtccagcacaactctccaagtgcgaacggtagccgccttcttgcaaatcttggaa
gattttttgccgaagacacccctacaagatctcatcatggtgcaaagatcttgcatcact
gtttatccaaggttgatcaactatggcgagggtttcgacgacatcatcgatgcgaacggc
aaagacgggaacgccctcccccccgcggctaacagcaagatggaagaacattacaagaag
atgtacggcgacgagattcaagtccgcaacattgttgagattcttgatcggtacaaacac
tctcgcgactcgcttgaccaagacgtgttcgcgtgtatgatccacggcttgttcgacgag
tacgctcattacgtcgattacccactagaggcgcttgcgacgactgcggtattatttggc
ggcatcatatcccataagctcatctcagatttgccgctgaagattgggcttggaatgatc
ctagaagccgtaagagattatcttccggaagattcgatgtacaagttcggactccaggcc
ctgatgcagctgttttctcgcttccgagaatggcccggcttctgccgacaattactccag
attcctggtctccaaggtactgaagcctggaagaaagcggaggacgttgtcagagaccac
gaggaagagcttgtccgatcgcgtaacggcattgcggcgcctgctcatggtcttcctttc
aatagcgagccattgacgaatggcaatacgacggaggttagaagcacggagcgtcaacca
cccccgttcacatccatcaatgcctcggagcattctcctggagtcgattgcgaagagccc
tcgagtgatacacaaggcaagatccagtttgtcctcaataacctaaccgagatgactctt
cagacaatgtgtcaggaactgcgggacatcttggagcatcgttatcagcaatggttcgcg
agccatctcgttgaggagcgagccaagatgcagcccaattaccaccaggtctaccttgaa
ctggtcaggctattcgaagaccaggtgctatggggcgaagtcctgagggagacatatgtc
agtgttgcccgcatgctcaactcagaggccaccatgcagaattcgaccgatcgttctcac
ctcaagaacctcggtggatggttgggtcttctgaccttggcacgcgacaagccgatcaag
cacaagaacatcgctttcaagcagttgctgattgaggcccacgacaccaagaggctcatt
gtcgttatccctttcgtctgcaaggttcttctccaaggcgtcaattcgactgtctttcga
ccacccaacccctggctcatggacatcattcactttctcatcgagctgtatcatcatgct
gagttgaagctgaatctcaagttcgagattgaggttttgtgcaaaggtctaaatctcgac
cacaagagcattgaaccctctggagaaattctcaaccgcgcgaccgttgaggacactcat
gagttgctttctcaagacacactggagacgtttgagaatctatctctgaatggaatctct
accggcgtaacaaccggtctttcgcctcaggttatcaccgcttccattccagaccttggt
ccgcttatccacataccgcccacgaacgagatggtggttaccgcaacgcggctgcacgag
atcgtccgcaccgctctcaccagggctttgcaggatatcatccaacccgtggtagatcgt
tctgtcaccattgctgccatttccacgcagcaaatgattcacaaagactttgcgactgag
cctgacgagaccagggtccgaacgtcggcaatcagcatggtgaaggcgacggctggaagc
ctagcgctcgtaacgtctaaggagcctctgagggccaactttacaaattatatgcggaac
ctgtcgaacgatctcccgcagggactacccgagggaacgatcattatgtgcgtcaactca
aatctggatctagcctgcaacatcatcgagaaacaggcggaggagagggccgtgcccgaa
attgaagaaatgatcgagcccgagttggaggctaggcgccggcatcgtcttcagcggccc
aacgagccatacgtggatgcctcgctcagccgatgggcctggactattcccaacccattc
aagctgtcgccaagtatgggtggcttgaatcctgaacaaatggctatctacgaagacttt
gctcgccagcctcgcaccaccacgtcaagtgctccgtcgcatgtgccttcggcttctgat
gcaacccggtcgcttgccaatgaagttctccaggatcaattttctacagtgcccagccta
ggcgcggctacggagccgccggctgtccagcatctcggctcccagatccaacaatacgcc
ccggtacacaacggagcgatggcaagcacaagaccccagacattcccaatggatggccgg
gcattaatcgaccgtgttcagaagttgcttatggagctccagcgtgttgcgaccgaagcc
cgcgaggagcattttgcagacctgccccggcctcatcctgttcttgatgtcgtcgacgcc
ttggtccagcacatgatcaaggcatcgcagacttccgaagagtttgccatatatgcagcc
gaccaaatcatccagatcatcttcactcaagttgaggacaacttggccttggagagcttg
gttcatgtgcttgagacattgaggaagatatctggcccaacgctgaacaatcgcgtcact
gctcttttccggcagcagcccggatcgacctttctaactttgccactccttgcggcgctg
ttgcgcacagatctccttgattggagaaacattgacctatcaatgtccaaggtcctgcaa
cagaggaaagaaggttcgctggaattcttggagcagatggtggacctcacacttctgggg
agtcgaccgatggcgctctacggagacttcgttcgaacgctcgagaccgcttggtcatgg
atacaagatgacccagaatcgccgattggccagcgcctgaaggcaaagctttccggccca
acattgccgcagactgcgcaccaggaggacgacagcgccattcagcaggaccagatggag
tatgttttcgacgaatggattcatctctgcaataacccaaacgcgtcagagaactctgcc
atcttgtttgttcagcaaatgcagattaggggcgtgataaaaaccaaggatgacctcttc
ctgttcattcggatcgcgacagatatgtcggtggacagattcgaacactttcttcataca
acagggactttaacagatgccttcctcgccattgacgccttggccaaggcgattaatagc
ttcatccggctccatggcgaaacggagcctgccccaacccccagccgtgcggcctatttg
gactccattctggctttcgttaccctcgtcctcaatcaccatcatgtgcagcgctcagaa
cacttcaatcagagggtgttccatcgtctcttgtcggtcctgctctacgagatcagttca
accgcagagcagcttcctgaggctgagaggtctgaaatgttcctcaaattcgctgccaga
cttgaagaccttgggccaaagttcctccccggctttgtttttgggtggctttcgcttctc
caacaccgcgcattcttgcccacaatcatgaaagatcgtgctggatgggtcgcgttcacc
aggctcttgcagctgcttctggagcatgtcggagagcaagtcaaggcgatcgagccttct
aatgtggcacgagagatttatcgcgcgacgctgaagctgctcgtcattctgcagcacgat
tactccgagtacctagctgctcattcgcaccagcttacagccagtgtcccgcctcactgt
aaacaattgctcaacgccatcctgacggcgaacccagcggcccatcccaagatgcccgat
ccatcgttccctggcttgcaaattgaccggttagatgaggtacgggactcgcctgacagc
ctagacaactctgcagttattttacgagactcgggcttgcttgaagttcttgaccacgcg
ctgcaaaacggcccctcggaagacacgttggcgcacattactcgggccattgttgagagc
ccacgagctgacaccggcttcggacacgtgcctatcaatgccaacctaccggtgattgag
gcagtcactctacatgtgggtaatcatgctgtcgagcaatcaacgcaaaagggtaccgat
gtcttcaacccggcctcatcagatgtggctgtcatgtctctactgctccacgagctcccg
cctgaggcgcgttactatctcatcaccagcctaaccaaccagcttcgatttccgaatgcc
cacaccaactacttcagccgcgtgttactggaaatcttcggccaagacatgaacgatccg
gaggagacggagattcggcagcaaattactcgagtactttgggagcgcctcattggctac
tggcctcagccgtggggtctcatggtgacggttgtcgaactgcttaagaacgagaagtac
atgttctttgatctccccttcgtgaagtccaacccagaggtcattgaacgatttcacgct
attttgcagcgagcctaa
DBGET
integrated database retrieval system
