Colletotrichum destructivum: 87950107
Help
Entry
87950107 CDS
T10409
Symbol
CDEST_13607
Name
(RefSeq) Putative TFIIH subunit TTDA/Tfb5, TFB5-like superfamily protein
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
cdet Colletotrichum destructivum
Pathway
cdet03022
Basal transcription factors
cdet03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
87950107 (CDEST_13607)
09124 Replication and repair
03420 Nucleotide excision repair
87950107 (CDEST_13607)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdet03021
]
87950107 (CDEST_13607)
03400 DNA repair and recombination proteins [BR:
cdet03400
]
87950107 (CDEST_13607)
Transcription machinery [BR:
cdet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
87950107 (CDEST_13607)
DNA repair and recombination proteins [BR:
cdet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
87950107 (CDEST_13607)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Sp-CxC
DUF2120
ARM_6
Motif
Other DBs
NCBI-GeneID:
87950107
NCBI-ProteinID:
XP_062785814
UniProt:
A0AAX4IZP9
LinkDB
All DBs
Position
9:join(1580513..1580531,1580643..1580791,1580881..1580928)
Genome browser
AA seq
71 aa
AA seq
DB search
MPRAIRGVLIECDPSIKSIIVNIDSNNHDYIIEDLDDQHVVVKENMVAALKKQLDERLKE
TQQPDESSDSD
NT seq
216 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcgccatcagaggagtcctcatcgagtgcgacccctccatcaagtccatcatc
gtcaacatcgactccaacaaccacgactacatcatcgaggacctcgacgaccagcacgtc
gttgtcaaggagaacatggtcgccgccctcaagaaacagcttgacgagcggttgaaggag
acgcagcagcccgacgaaagttcagactctgattga
DBGET
integrated database retrieval system
