Colletotrichum destructivum: 87950112
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Entry
87950112 CDS
T10409
Symbol
CDEST_13612
Name
(RefSeq) Putative ATP-dependent RNA helicase DEAD-box, Helicase superfamily 1/2, ATP-binding protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cdet Colletotrichum destructivum
Pathway
cdet03013
Nucleocytoplasmic transport
cdet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
87950112 (CDEST_13612)
03015 mRNA surveillance pathway
87950112 (CDEST_13612)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdet03019
]
87950112 (CDEST_13612)
Enzymes [BR:
cdet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
87950112 (CDEST_13612)
Messenger RNA biogenesis [BR:
cdet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
87950112 (CDEST_13612)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Motif
Other DBs
NCBI-GeneID:
87950112
NCBI-ProteinID:
XP_062785819
UniProt:
A0AAX4IZK0
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All DBs
Position
9:complement(join(1595714..1596220,1596283..1596520,1596572..1597057,1597120..1597328))
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AA seq
479 aa
AA seq
DB search
MADLASRITEPPAEGAAEDAQIPQADGNVEALGGSGLIENTYDVDVKLGDLQSDQTSTLY
SAATFSDMNLPEPILRGLLSLNYQKPSKIQEKALPLMLADPPRNMIAQSQSGTGKTAAFV
VTTLSRVDYSQLEQPQALILAPSRELARQIEGVVGKIGSFCEGLKVAAALPGALERNAPV
RANVIVGTPGTVMDIVRRRQLDVSKLRLLVIDEADNMLDQQGLGDQCVRVKNMLPRDIQI
LLFSATFPDKVMGFAEKFAPKADQIRLKHTELTVKGISQMYIDCPTEQDKYEVLVKLYGL
MTIGSSVIFVKTRESADEIKRRMEADGHRVSALHGAKDGPERDRLLEEFRSGQSKVLLTT
NVLARGIDVSSVSMVINYDIPMKGRGDSEPDPETYLHRIGRTGRFGRIGVSISFVYDKKS
FYALKQIADLYEIDLVQLDANDWDQTEEDVQKVIKSNRAKAAFAPSATDTGATNAAAKS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccttgccagtcgcatcacagagcctcccgctgagggcgcagcagaggatgcg
caaattccccaggctgacggcaacgtcgaagcacttggaggatctggtctcatcgaaaac
acctacgatgtcgatgtcaagcttggcgaccttcagtccgaccaaaccagcaccctttat
tctgctgcaaccttcagcgacatgaacctgcccgagcccatccttcgcggtctcctcagc
ctcaactatcagaagccctccaagatccaggagaaggctcttcccctgatgcttgccgac
cctccccgcaacatgatcgcccagtcgcaatccggcactggtaagactgccgccttcgtc
gttaccactctgtcccgtgtggactatagccagctcgagcagcctcaagctcttattctt
gcgcccagtcgtgagcttgcgcgtcagattgaaggcgtcgttggcaaaattggtagcttt
tgcgagggtcttaaggtggctgcagctcttcccggtgcccttgagcgcaacgcccctgtc
agagccaacgtcatcgtcggtactcctggtaccgtcatggacatcgtccgcagacgccaa
ctggatgtgtctaagcttcggctccttgttattgacgaggccgacaacatgcttgaccag
cagggccttggcgatcagtgtgtccgcgtcaagaacatgctcccccgcgacattcagatc
ctcctgttctctgccactttcccggacaaggttatgggctttgccgagaagtttgcgccc
aaagctgatcagatccgtctgaagcacaccgaactcaccgtcaagggcatctcccagatg
tacattgactgccccaccgagcaagacaaatacgaggttcttgttaagctctacggtctt
atgacgatcggctcctccgtcatcttcgtcaagacccgcgagagcgccgacgagatcaag
cgacggatggaggctgatggccatcgtgtgtcggccctccacggtgccaaagacggcccc
gagcgtgaccgcctgctggaggagttcagaagtggccagtccaaggttcttcttaccacc
aacgtgctggctcgtggtatcgatgtgtctagcgtgtcgatggttatcaactacgatatc
cctatgaagggacgcggagattcggagcccgaccctgagacatacctgcaccgtatcggc
cgcactggacgtttcggacgcatcggtgtcagtattagcttcgtctacgacaagaaaagc
ttctacgctctcaagcagatcgcggacctgtacgagatcgacctcgtgcagctcgacgcc
aacgactgggaccagacggaggaggacgtgcagaaggtcatcaaatcgaaccgtgccaag
gccgcattcgcaccgagtgccaccgacaccggcgccaccaatgccgccgccaagtcgtag
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