Colletotrichum destructivum: 87951869
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Entry
87951869 CDS
T10409
Symbol
CDEST_15369
Name
(RefSeq) Putative RNA polymerase, alpha subunit, RNA polymerase Rpb1, domain 3, RNA polymerase Rpb1, domain 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
cdet Colletotrichum destructivum
Pathway
cdet03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
87951869 (CDEST_15369)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdet03021
]
87951869 (CDEST_15369)
Enzymes [BR:
cdet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
87951869 (CDEST_15369)
Transcription machinery [BR:
cdet03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
87951869 (CDEST_15369)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
IMP2_N
DUF4606
Motif
Other DBs
NCBI-GeneID:
87951869
NCBI-ProteinID:
XP_062787576
UniProt:
A0AAX4J4D2
LinkDB
All DBs
Position
11:join(849868..850049,850110..855057)
Genome browser
AA seq
1709 aa
AA seq
DB search
MNISQPISSSVETVEFAFLTEEEIKAISVKRIENDSTFDNLLNPVPGGLYDPALGSWGDS
LCATCNLNQSSCPGHAGHIELPVPVYHPVFLDQVLRLLRSQCVYCKGFRMRHREINRYSC
KLRLLQYGLLHEAHLVDAIGEELKGLALPGVPTDYESEAEEEGTLSVDNVIGAREAYVRQ
ALKSHKLSLGEVRKGKHEGAIEMRRELIKDFLTQITKPRRCDNCGGISPAYRKDRFVKIF
EKALSERDLAQMAQRNLHVKDSMATTACARKSNPKRAAAGADDGVTDVDTTSANETDVEM
RDASGDEQDSADKEESAQADAVAIAPGQQRYISAMEVRARLRELFEKEQDMMSLVYNSKP
ITKKAAKVSADMFFIRTILVPPNKFRPEARTGDSQISEAQQNSLYKMIMRNCSNIARIHQ
SVGATDQYGRPRNITDLHQVWTELQESVNSLIDKSKNPVQGAAAKRNEDGIKQKLEKKEG
LFRKNMMGKRVNFAARSVISPDPNIETNEIGVPPVFARKLTYPEPVTSHNFRDMQQAVVN
GVDKWPGAAAIEYENGQIINLRSKSVDDRVSLANQLLAPTNYQMSGMKSKKVYRHLTNGD
VVLMNRQPTLHKPSIMGHRVRVLPGEKTIRMHYANCNTYNADFDGDEMNMHFPQNEVARA
EALQIADTDHQYLSGTAGKPLRGLIQDHLSVSVALCNKDTYFDRDSYHQLIYSALRPESG
HIFGERIEVLPPAIIKPRPKWTGKQVISTILKNIKPPNGEGLWMSGKCQVKGEQWGKSHM
EEGDVLFQDGQFLTGILDKAHLGPSSGGLIHSIHEIYGPSVAGKLLSGMGRLLTRYLNMR
AFTCGMDDLLLTPDGEAARKDALKAAKNIGLEVAAKYVSLEDKTPDSTDAELLVRLEEVM
RDDSKQEGLDILVNQSSRNVSSMAMSACLPAGLAKQFPKNQMQSMTTSGAKGSQVNANLI
SCNLGQQILEGRRVPLMVSGKSLPCFKPFETDVRAGGYIVQRFLTGIRPQEYYFHHMAGR
EGLIDTAVKTSRSGYLQRCIIKGMEGLTVAYDSTVRDADGTLVQFLYGEDGLDPTKQKYL
TDFGFVLRNVNSETAQLNFSKDFKEKIASNKDDILKHMKSAVKHAKLNSSGGKDPIISLV
NPAKVAFATSEKYYEQMVKYIKDNEDGLIRDKSHAPSGLVNTPTVSKKSAELVFAAKYMR
SLVEAGEGVGIVAGQSVGEPSTQMTLNTFHLAGHSAKNVTLGIPRLREILMTASRSISTP
AMTLPLHEELSAAKGEVFAKSISVLPLADVLDTATVNERVGKGSNGALAKFYDVRLNFFP
ADEYTKAYAIDTSDVFDTIEKRFLDHLLKIMGREIKKHRSYSTSATPNVGVKAGVVEMAT
GNSDARAVNDDYDADDDDGDGDATNAKNKANREEAVSYGPNDDEDDAIQRLMARETSTDD
EEGFEGSLAPEADKQNLDDDEIVGSDHSSESDSGWRADRIKRRYLRVTNFGHDEAGEWCE
FTLEFEANTPKVLMLNIVQAAVKKSVIQQIPGVGLCTFTADHKVTDPSTGDEVKVPAIYS
SGCNLKAMQKYGDFINPNKIMTNDIGAVLDVYGVEACRNNIVLELAGVFRGHGISVDNRH
LNLIADYMSRNGDYTPFNRNGLRGNVSPFTKMSFETTLAFLKDAVLDGDWDDLKTPSGRL
VMGRLGKIGTGAFDVLTTLPTHHVSYNVE
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atgaacatctctcaacccatctcttcatctgtcgagacggtcgagttcgcattccttacc
gaagaagaaatcaaggctatctccgtcaagcgcatcgagaacgacagtaccttcgacaat
ctccttaaccccgtccccggtggcctctacgacccggctcttggatcatggggggatagt
ctttgcgccacctgtaatctgaatcagtcttcatgccctggccacgccggccacatcgag
ctccctgttcctgtctaccaccccgtctttctcgaccaggtccttcgccttctccgatca
caatgtgtttactgtaaagggtttcgcatgcgccaccgcgaaataaatcgctactcgtgc
aaacttcgactcctgcaatatggtcttcttcacgaggctcacctggttgatgccattggc
gaagaactaaagggtctcgccctgcccggtgtgcctaccgactatgagagcgaggccgaa
gaagaaggtactctctccgtggacaacgtcattggcgcgagggaagcctacgtccgccag
gctctgaagtcacacaagctcagcctcggcgaagtcaggaagggcaagcacgaaggcgcc
atcgagatgcgcagagagctcatcaaggacttcttgacgcaaatcaccaagccgaggcgg
tgcgacaactgtggtggcatatcgcctgcctaccgcaaggatcgcttcgttaagatcttc
gaaaaggccctcagcgagagggatcttgctcagatggcccagagaaatctgcatgtcaaa
gactccatggcaacaacagcttgcgcccgtaaatctaatccaaaacgcgccgccgccggt
gccgacgacggcgtcaccgacgtggatacgacttcagccaatgaaaccgacgttgaaatg
cgcgatgccagcggtgacgagcaggattcagcggataaggaagagagtgcacaagccgac
gctgttgcgatcgctcccggtcagcagcgctacatcagtgcaatggaggttcgcgcacgc
ctacgggagctattcgagaaagagcaagacatgatgtcactggtgtacaactcgaaaccg
atcaccaagaaagccgccaaggtatcggcagacatgttctttattcggaccattcttgtc
ccgccgaacaagtttcggcccgaagcccgaaccggcgactctcaaatctccgaggcccag
cagaactcgctgtacaagatgattatgcggaactgcagcaacattgcgagaatacaccag
agcgttggagctacggaccagtatggaagaccgagaaatatcaccgacttacatcaagta
tggacagagttgcaagaatctgtcaactcgctgatcgacaagagcaagaaccctgtccaa
ggcgcagcggccaagagaaacgaggacggcattaagcagaagctggaaaagaaggagggt
ctcttccgaaagaacatgatgggaaagcgtgtcaacttcgcagcccgaagcgtgatttcc
cccgaccccaacatcgaaaccaatgagatcggcgtgccccctgtttttgcacgcaaactc
acctatcccgaaccggtcacaagtcacaacttcagagatatgcagcaagccgttgttaac
ggggtcgacaagtggcccggagcagctgcaatcgagtacgagaatggacaaattatcaac
cttcgatccaagtctgtcgacgaccgtgtgtcactcgccaaccaacttctcgcgccaacc
aattaccagatgagcggcatgaagagcaaaaaggtataccgacacctgacaaacggcgat
gttgtcttgatgaaccgtcagccgacgctacacaagccgtctatcatgggtcatcgagtt
cgtgtgctgcccggagagaagactatccgcatgcactacgccaactgcaacacatataac
gccgatttcgacggtgatgagatgaacatgcatttcccacaaaacgaagtcgcaagagca
gaggcccttcagattgccgatacggatcatcaatatctgtcaggcacggccggcaagccc
cttcgtggtttgattcaggaccatctttcagtctccgttgcgctctgtaacaaagatacc
tactttgatcgcgactcctaccatcagctcatctactcggctctccgcccggagagtggc
cacatctttggcgaaaggatcgaagttcttccaccagcaattatcaagcccagacccaaa
tggacaggcaaacaggtcatcagcacaatcctcaagaacatcaaaccacccaatggagaa
ggcctttggatgagtggcaaatgccaagtcaagggtgaacaatggggcaagagccatatg
gaagagggcgacgttctcttccaggacggtcagttcctgacgggcattctggacaaggcc
catctggggcccagctcgggaggtctcatccactctatccacgaaatatatggacctagt
gtcgcaggcaagctgctcagtggcatgggccgactcctcaccagatacttgaatatgcgg
gcctttacttgcggtatggacgacctgttgctcacaccggacggcgaggctgcccgaaag
gacgccttgaaggcagccaagaacatcggtcttgaagtcgcagccaagtatgtctcactc
gaggacaagacacccgacagcacggacgctgagcttctcgttcgcttggaggaggtcatg
agagacgacagcaagcaagaaggtctcgatatacttgtgaatcagagctcccgaaacgta
tccagcatggccatgtcagcctgtctcccggccggtctggccaagcagttccccaaaaac
caaatgcaatcgatgacaacctctggtgcaaagggaagccaagtcaacgccaacctgatt
tcctgcaacttgggacaacaaattctcgaaggcaggagagttcccctcatggttagtgga
aagtctctgccctgcttcaagcctttcgagacggatgttcgcgctggaggttacattgtc
cagcgattcttgactggtatccggcctcaagagtactactttcatcatatggcaggtcgt
gaaggccttatcgacactgctgtcaagacctctagatcaggttacttgcaaagatgcatc
atcaagggtatggagggattgacagtagcatacgactcgacggtgcgtgatgcagatggt
acgctagtgcaatttctctacggcgaggacggactggacccgacaaagcaaaaatacctt
accgactttggcttcgttcttcgcaacgtaaattccgaaaccgcccagctcaattttagc
aaggacttcaaagaaaagattgctagcaacaaagacgacatcctcaaacacatgaagagc
gctgtcaagcacgccaagctcaacagctccggaggcaaggaccccattatttccttggtc
aaccctgcaaaagtagcattcgctacgtccgagaagtactacgagcaaatggtcaagtac
atcaaggacaatgaggacggtctcattcgcgacaagtcgcatgccccgtctggcctggtt
aacacacccaccgtcagcaagaagtcggcggagctcgtcttcgctgccaagtacatgcga
tcacttgtcgaggctggtgaaggtgtcggtattgttgccggtcagagtgtgggagagccc
tcaacgcagatgacactcaataccttccatttggctggtcactcggcaaagaatgtcacc
ctcggcattcctcgtctccgcgagatcctcatgacagcgagtcgctccatttcaaccccg
gccatgactcttcctcttcacgaggagctttccgctgccaagggagaagtctttgcaaag
tcgattagcgtcctgcccctggctgacgttctcgacacagcaaccgtcaatgagcgtgtc
ggcaagggcagcaacggtgctctggccaagttctacgatgtacgactcaacttcttcccc
gcggatgagtacaccaaggcgtatgctattgacacatccgatgttttcgacacgattgag
aagcgattcctagatcaccttttgaagatcatgggccgcgagatcaaaaaacaccgcagc
tactccacttctgcgacgccaaatgtcggtgtcaaggcgggcgttgtagagatggcgacc
ggcaacagtgacgcgagagctgttaacgacgattacgatgccgatgacgatgatggcgac
ggtgacgctacgaatgccaaaaacaaggcgaaccgcgaagaggctgtgtcatacggaccc
aacgacgatgaggatgatgcgatccagcgactgatggcgcgtgagacgtcgacggacgat
gaagaaggcttcgagggcagtctggcgccggaggccgacaaacagaatttggatgacgac
gagatagtggggtctgaccactcctcagaaagcgacagcggctggagagcggatcggatc
aagagacggtaccttcgtgtcaccaacttcggccacgacgaagcgggagagtggtgtgag
ttcacgctcgaattcgaagcaaatactcccaaggtgttgatgctcaacatcgtgcaagcc
gccgtcaagaagtcagttattcagcaaattcctggtgtcggcttgtgtacgtttacggcg
gatcacaaggtcacggatcccagcacaggcgatgaggtcaaggtgccagccatctactca
tcaggatgcaaccttaaggccatgcaaaagtatggtgactttatcaaccccaacaagatt
atgacgaatgacattggcgccgtgttggacgtgtacggtgtcgaagcgtgccgaaacaac
atcgtcttggagctagcaggcgtcttcagaggtcatggcatcagcgtcgacaacaggcac
ttgaaccttattgctgactacatgtcacgtaacggcgactacactccctttaaccgcaat
ggcctgcgcggcaacgtcagcccctttaccaagatgagttttgagacgacgctggccttc
ttgaaggacgctgtgctcgacggtgactgggacgatcttaagacgccaagtggtcgtctt
gttatgggccgcttggggaagattggcacaggtgcatttgacgtcctgactactctacct
actcaccatgtgtcatacaatgttgagtaa
DBGET
integrated database retrieval system
