Entry |
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Name |
(RefSeq) nuclear pore complex protein Nup98-Nup96
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KO |
K14297 | nuclear pore complex protein Nup98-Nup96 |
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Organism |
cdeu Cryptococcus deuterogattii
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:cdeu00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CNBG_0017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cdeu03019]
CNBG_0017
03036 Chromosome and associated proteins [BR:cdeu03036]
CNBG_0017
Messenger RNA biogenesis [BR:cdeu03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CNBG_0017
Chromosome and associated proteins [BR:cdeu03036]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CNBG_0017
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
4:complement(1415788..1422188)
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AA seq |
1859 aa
MFGSTSSWGQNNQNQQPQQGGGLFGGGGGGGFGQQNTGGFGQTGTTGGFGQPAQNTGGVF
GGGAATNTGFGGFGANSQQQQTQQSNAFGAARPAFGAAGSTFGQNTTGGGLFGSSNTANT
GFGSNTSNATGGGLFGAKPATATFGSGATSNLFGAKPSTGFGASTGTQEVLKGPSELQTY
RTDIPPPPPPSTGTANPIYYPTWQADPSTNTALGKEGPPHLFHSITAMLPYRGCSWEELR
ALDYQQGRKEATPQQQNAFGASSTGGFGQPASTGFGQQPATTGFGAKPAGTGLFGSSSPA
TGFGTTPNTSTGFGASNTNTGGGLFGQSQPQQGSSLFGQTNTNTSGGLFGQTQPQQNTGG
GLFGSNTTTTNPFGGAQTTQQPQATSTFGGFGQSKPAFGSTGTTGFGTGSTGTSTFGQTG
TGTTGFGGFGQTQPQQQQQQQQPATGGGLFGGGGFGATNTQQQAPSTGLFGQTAQQQQPA
TTGFGAKPGGLFGSTTVPASTSTGFGGFGQTSTSQPAGTGLFGSTGTNTNTTGGGLFGQT
QPQQTVQQPATGGGLFGNVGTAPATGGGLFGAKPATTTAPSTGLFGQTQPAQQPAQTGGG
LFGSTTSTTGGGLFGGTANTSLGQLGQQNQPSGGGLFGAKPATGGGLFGGASTTGTGTGL
FGQQPQQQQQQQQPQTGTTGGLFGNLGQSQPASTGLFGSTATQPAQQSTFGGGGLFGGLG
QSTVQQPQQQQQLLQPSLTASIDQNPYGNNPLFAYSGQKLEVGSQSKKPALPPLTASSYR
LTPSTNKSKINKLRGFASPLNVSQSPGRSGSPLSVSSPGRSSLFNSPAAPDRYKGLSDTA
LTPNAFVPRPNIKKLSVTPNIGSSIGNSDQLESVLGKSALKTSTSSVKGTSSPKTSGTPL
VFHPPVNGTSSRPEIADSSLTRSTSAVASPRVAGSERAPKEGDYWCRPKLEKLEQMSKED
LSQLSGFTAGRRGFGEVSFLEPVDLTLAPLEDILGSIIVVDQSELSVYPDDYPQKPEMGQ
GLNVPARIMLENVFTTDKATKDWVRDPEDPRFQKFVRRVKAIPDTEFISYTDDGTWTFRV
EHFTTYGIADSDEDESVENEDLKRRRKGATSDFSRSPSRTSAEDDDDEMFPPTKSIRDVE
AEHDSGFEEDQLSEESYMEDGLTEANESAEMDFPQASWDLPIKAQLGAEGMKNLRGMQDS
FFGSAASMARPGKELALSKKREAEKGYGSFFREAEEENVKLDEQVIKRTSFGETQISLPK
LRQPRKYARVMEEESVAKGAEGLKVDAGLALGRSFRCSWGPNGELVHFGKICSPTESIRA
DTDAIVHIEKVEVLSEENKVETAKSQRLLSLHLETSLIEQVEGVPIATINPGIRFHDFAS
RFDTGDRSHEANVFRLGVALFDEIDVQLPEGSSEELIERISSIRRKLALSKWLEDAVAPL
VDFDVITRSEDRPGKIFSLLSGHQVERAVESALEAGDMRLATLLSQAGGEESFKDELLKQ
LEDWQVYKVNPLIAVGYRKLYALLAGITDVSAGDPSRGSDGCPDVLIAEGLDWKRAFGLH
LWYGIPFENTIRDVVDSYTFSLTSSHPPAKPLPPYLEKSSDNARSWNLPTEPTDVLYNLL
QLYSDDAISLDQVLRSRDTSPSPFDVRLAWHLYVLLSRVLRRRDFEDRDESNGYSANADR
LTAGYAAQLEQIGEWKWAAFVLLHLETVDGRSKALHALLYRHPDATKEDQAFLTETLRIP
EEWIHESRAASLCSIDDAWGEYHAHLQAKLYDRAHKILVEKLAPEAVLRDDKVLLRRLCS
KLEGKGVSGWDYGGKLFLEWADASEDTVSLPPSIVFSGAIADSRKAVLRQFEQMISEWT |
NT seq |
5580 nt +upstreamnt +downstreamnt
atgttcggcagcacttcgtcatggggtcaaaataaccaaaatcaacaaccacagcaaggc
ggaggtctctttggcggtggaggaggaggaggtttcggtcaacagaatactggagggttt
ggccaaactggcaccacaggtgggttcggacagcctgcacaaaacactggcggcgttttt
ggcggtggcgctgccaccaacactggatttggtggatttggagccaatagccaacaacag
caaacacaacaatccaatgcgtttggagctgcaaggccggcgtttggtgctgcaggatcg
acttttggtcaaaacacgactggaggtggtctttttggaagctcaaacactgccaatact
ggattcggatcaaatacttccaatgcaactggcggcggtctctttggtgccaaacctgcg
actgctacgtttggatcaggtgcaacgtcaaacctcttcggcgctaagccttctactggc
tttggtgcttccactggtactcaagaagtcctcaagggtccttctgagctccaaacttac
cgaactgatatcccccctcctccacccccctcaactggtactgccaatccaatctattac
cctacttggcaagccgatccttccaccaatactgctctcggtaaggagggaccgccccat
cttttccactccatcactgctatgcttccttaccggggctgcagttgggaagaattgaga
gcgttggattaccagcaaggaagaaaagaggctacaccccagcagcagaatgcatttgga
gcctcttctaccggaggcttcggtcagcctgcaagcactggattcggtcagcaacccgct
actactggattcggtgccaaacccgccggcactggtctctttgggtcgtcctcccccgct
actggctttggtacaactccgaataccagcactgggtttggcgcttccaacaccaacacg
ggtggcgggttgttcggccagtcccaacctcaacaaggttcttcactgtttggtcagacc
aataccaacactagcggcggtcttttcggccagacacagcctcaacaaaacactggtggt
ggtctctttggcagcaacacaaccaccaccaatcccttcggtggtgcccaaactacacaa
cagcctcaggctaccagcacctttggagggtttggccagagtaaacctgccttcggaagc
acaggaactacgggtttcgggacaggcagtaccggaacgagcacctttggtcaaacaggg
accggtacgactggtttcggcggcttcggtcagactcaaccgcaacaacagcagcaacaa
caacaacctgcgacaggcggcggattatttggcggtgggggatttggtgccactaatacg
caacagcaagctcccagtacaggacttttcggccagactgctcagcagcagcagcctgct
actactgggtttggtgcgaagcccggtggattgtttggaagcacgactgtccctgcttcc
acaagtacaggatttggcggttttggtcagacaagcaccagtcaacctgccggcaccggt
ttgtttgggagcactggtacaaatactaacaccactgggggtggactattcggccagaca
cagccccaacaaacagtccaacagccagcaaccggtggaggtctctttgggaacgtgggt
actgctcctgcaactggtggtggtctgtttggcgcaaagcctgctactactacagcacct
agcacaggccttttcggtcaaacgcagccagctcagcaacctgcccagacgggaggtgga
ttgtttggcagcaccacttcaactactggcggcgggctctttggcggtactgcaaatacc
tcccttggtcagttaggccaacaaaaccaaccgagcggtggaggactgtttggcgcgaag
cccgccacaggcggaggtctgtttggtggagcgagcactaccggcactggtactggtctc
tttggtcaacagccacagcaacagcagcaacagcaacagcctcagactggcacgacgggc
ggactgtttggcaacctcggtcagtcacagcctgcctcaactggcttgttcggcagcacc
gcgacccagcccgcacagcaaagcacttttggcggcggtggtcttttcggcggattggga
cagtcaactgtgcagcaaccccagcagcaacaacaactactgcaacctagtcttacggcg
tccatcgaccaaaacccttacggaaataaccctctttttgcatacagtggtcaaaagctt
gaagttggctcgcagtccaagaagccggcgctaccccctctcactgcgtcatcctaccgt
cttactccctcgaccaataagtccaagatcaacaaactccgtggctttgcgtctcccctc
aatgtgtctcagagccctggccgatccggtagccccctttctgtcagctcacctggtcgt
tcgagcttgttcaactctcccgctgctccagacaggtataagggtctgagtgacaccgcc
ctgacccccaacgcctttgtgcctcgtccaaacatcaaaaaactctcggtgacaccgaat
attggcagctccattggtaatagtgaccaattggagtctgttcttggcaaatcagctctc
aagacctcgacgagctctgtcaagggtacttctagccctaaaacttctggtactcctctc
gtgttccatcctcctgtaaatggtacatcctcccgccctgagatcgccgattcttctctc
acgcgatcaacttcggccgtcgcatcaccccgagttgctgggtccgaacgtgcgcccaag
gaaggtgattattggtgtagaccaaagttggaaaagctcgaacaaatgagcaaagaagat
ctctcccaattgagtggtttcactgcaggtcgacgtggtttcggtgaagtttcgttcctt
gaacccgtcgatttaactcttgcccccctagaagatattcttggctccataatagtcgtt
gaccaatctgaactctctgtctaccccgatgactacccgcaaaagcctgaaatgggccaa
ggcttgaatgtgccagctagaatcatgctcgagaatgtgttcaccacggacaaggcgacc
aaagattgggtgcgagaccctgaagacccaagattccagaagtttgtcaggcgtgtcaag
gctatccctgacactgaattcattagttatactgatgatggaacctggaccttccgtgtg
gagcactttacaacctacggtatcgccgatagtgacgaggatgagagcgttgaaaatgaa
gacctgaaaaggcggaggaaaggggctactagtgatttttctagatctccatccaggact
tcagcagaggacgacgatgatgagatgtttcctcctaccaaaagcatccgggatgtcgaa
gcggagcacgactctgggtttgaagaggaccagctttcagaagagtcgtatatggaagat
gggctgacggaggcgaatgaaagcgccgagatggattttcctcaagctagttgggatctt
cccatcaaggcacaacttggtgccgaaggaatgaagaacttgcgaggtatgcaagactct
tttttcgggtctgccgcgtctatggcgagacctgggaaagagttagcattgtcgaagaag
agggaagctgagaagggatacgggtcgttttttcgtgaagccgaagaggaaaatgtgaag
cttgatgagcaggttatcaagcggacctctttcggcgagactcaaataagcctgcccaaa
cttcgtcaaccaaggaaatatgcgagagtaatggaagaagagagtgtggccaagggagca
gaggggctaaaagtagatgctggactggctttggggaggtctttcagatgttcttggggt
cccaatggagagctggtacactttggaaagatttgttcaccaactgagtcaatacgagcg
gacaccgatgccatcgtccatatcgagaaagtggaggtactatcggaagaaaacaaggtg
gaaacagcaaagtcccaaagactactctcccttcacctggaaaccagcttaatcgaacaa
gtagaaggtgtgccaatagctaccatcaacccaggcattcggttccacgactttgcttct
cggtttgacacgggtgatcgctctcacgaagccaatgttttccgccttggtgtcgctctt
tttgatgagattgacgttcagcttcctgaaggatcatcggaagagcttatcgaacgcatc
tcgtctattcgccggaagctggctttgtccaagtggttggaagatgctgttgctcctttg
gtcgattttgacgtaatcactcgaagtgaggaccgaccaggcaagattttctctcttctg
agcggccatcaagtcgagcgtgctgtcgagtctgctttggaagccggtgatatgaggtta
gcaacattattgtcccaagccggtggggaagaaagtttcaaagacgaactgttgaagcag
ttggaagactggcaggtgtacaaggtgaaccctctaattgctgttggttaccggaaactc
tacgctcttttagccggcatcaccgatgtttcagccggtgatccgtctcggggatctgat
gggtgccctgacgttttgattgcagaaggtcttgactggaagcgtgcgtttggtcttcat
ctttggtacggtataccttttgagaacaccatccgagatgtcgtcgactcttataccttt
tccctcacatcctctcatccacctgctaaacctcttccaccatacctggagaaatcatcc
gacaatgctcgttcctggaaccttcccactgaacccacagatgttctctacaatcttctt
caactttattctgacgacgccatctctcttgaccaggtactccggtcgcgagacacatca
cctagtccatttgacgtgcggctagcatggcatctttacgtattgctttccagagtgttg
agaagaagagactttgaagacagggatgagagtaacggatacagcgcgaacgctgaccga
ttgacggcgggctacgctgcgcagttggaacagattggtgaatggaagtgggctgccttt
gtattgttgcacctcgaaacagtcgatgggcgttcaaaagctctccatgcccttctttac
cgacatccggacgccactaaagaagatcaagcgttcttgacggaaactcttcgcatccca
gaagaatggatacacgaatctcgagcagcttccctttgttcgattgatgatgcttggggt
gagtatcatgctcatcttcaagccaaactctacgatcgagcgcacaagatactggtggag
aagttggcgccagaggcggtcttgagggatgacaaggtccttttgaggaggttgtgctca
aagttggaaggcaagggtgtttccggttgggattacggcggaaagttgttcttggaatgg
gccgacgcttcggaagatactgtttcgcttcctccgtcaatcgtattttcaggtgccatt
gccgactcgcgaaaggctgttttacggcagttcgaacagatgatttcagaatggacctag |