Cryptococcus deuterogattii: CNBG_3214
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Entry
CNBG_3214 CDS
T09796
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
cdeu
Cryptococcus deuterogattii
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdeu03016
]
CNBG_3214
Transfer RNA biogenesis [BR:
cdeu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
CNBG_3214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
88179512
NCBI-ProteinID:
XP_062883192
LinkDB
All DBs
Position
1:814068..815975
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AA seq
550 aa
AA seq
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MEHTTDIRAGPSKLKASQTPRKAPEKSASSTPVINDDSDDPRPTPAKATSGLATGGQGDE
EEEGEERMDFKLIQSFADKVQHLPTADSVDGLTSRPQIIIPRRGEKDFEPLQETVNLQEM
MLEKSRQALFNALIGVRGGHNNSISHALLTPNKPFPRLLVIHGHLLDTMGITVRTPPAGS
KGKGKTSLELLPEEALYLLERGSLQIWIGRDPETDEEIEAGVGEWCDDEYGVKGAIEMSV
MEGFGAFIGREGLTWERYQAYSYLKRLGYNVQRSRQFIPEYFLAAPSVQLDAQDPRLPPF
HTWWLNIPKWIVRFFKALVRGVQRVARSMASVGLGLRLTRDPFKGTLLSGWRGSSYNSLF
SHLRVVPAGHDQPPPRPSPSPSDDIYAPLLHNPYIPFWHIWKPMTPWSKRNWDKGSEEGL
KTQRPDYFAAVIQARTTPLPTIHQLEEIYAMLPDEPKGPIKRYGPQYQRPPRPQASKPQT
QTPTQIPSRLQSLLECMGWKQQAKTKPQVPSVNVGALRNGDRGFIVGVNDSGNNAWIRFG
RTNFSQTPAI
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggaacataccacagatatacgcgcaggtccaagcaagctgaaggcctctcagacaccc
cggaaggcaccagaaaaatccgcctcttcaactcctgtaatcaacgatgatagcgacgac
cctcgacctactcctgcaaaagctacttcgggccttgcaacaggcggacagggggacgaa
gaggaggagggcgaagagaggatggattttaagcttatccagagctttgccgataaagtt
caacacctgcctacggccgacagcgtggatggcttgacgtctcgaccgcaaatcatcatt
cccagacgcggagaaaaggattttgagcctctacaggaaactgtcaacctgcaagagatg
atgttggaaaagagccgacaagcattgttcaacgctctcattggtgtgcgtggaggtcac
aataactctatatcccatgctctcttgacacccaataagccattccctcgattgctagtt
atccatggacatctactagacactatgggtattactgttcgaactcctccggctggttcc
aaaggcaaaggcaaaaccagccttgaactcttacctgaagaggctctctacttgctggaa
cgtggatcattgcaaatatggataggaagagaccccgaaacggatgaagaaattgaagca
ggggttggagaatggtgcgatgacgagtacggggtcaagggcgctattgaaatgagcgtt
atggaaggtttcggggcgttcatcggccgagaaggattgacatgggagcgttaccaggcc
tattcgtatctcaaacgccttggctacaatgtccaaaggtcccgccagttcatcccggaa
tatttcttggcggcaccctcagtacaactggatgcgcaagatcccaggttaccgcccttc
catacctggtggttaaatatacccaagtggattgtgaggttctttaaagctctggttaga
ggtgttcaacgcgtggctagaagtatggcgagcgttggtttggggttacgcttgacgagg
gatccgttcaagggtactctgttgagcggctggaggggttcaagttacaactcattattc
tcccatctgcgagtcgttcctgccggtcacgatcagcccccccctcgtccttccccttct
ccatctgacgacatttacgctcccctcctccacaacccttacatcccattctggcatatc
tggaagcccatgaccccttggtcaaagagaaattgggataaaggtagcgaggaagggctc
aaaactcagagacctgattattttgcagctgtcatccaagcgaggactacgcctctgccc
actattcaccagcttgaagaaatctacgccatgctacccgatgaacccaaaggtccaatc
aagcgatacggtccccaataccagcggccgcctcgcccccaagcgtcaaaaccccaaaca
cagactcccactcagattccttctcgtttacaatctctcttagagtgtatgggctggaag
cagcaggcgaaaacaaagccgcaagttcccagtgtcaatgttggagcgctgcgtaatggc
gatagaggattcattgtgggtgtgaatgactcaggcaataatgcgtggattcgttttgga
agaacaaacttttcgcagaccccagcaatctag
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