Caldicellulosiruptor diazotrophicus: CaldiYA01_05600
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Entry
CaldiYA01_05600 CDS
T08057
Symbol
argS
Name
(GenBank) arginine--tRNA ligase
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
cdia
Caldicellulosiruptor diazotrophicus
Pathway
cdia00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cdia00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CaldiYA01_05600 (argS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cdia01007
]
CaldiYA01_05600 (argS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdia03016
]
CaldiYA01_05600 (argS)
03029 Mitochondrial biogenesis [BR:
cdia03029
]
CaldiYA01_05600 (argS)
Enzymes [BR:
cdia01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
CaldiYA01_05600 (argS)
Amino acid related enzymes [BR:
cdia01007
]
Aminoacyl-tRNA synthetase
Class I (G)
CaldiYA01_05600 (argS)
Transfer RNA biogenesis [BR:
cdia03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CaldiYA01_05600 (argS)
Prokaryotic type
Other AARSs
CaldiYA01_05600 (argS)
Mitochondrial biogenesis [BR:
cdia03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
CaldiYA01_05600 (argS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1d
tRNA-synt_1
tRNA-synt_1f
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
BCS80600
UniProt:
A0ABM7NKF7
LinkDB
All DBs
Position
627357..629042
Genome browser
AA seq
561 aa
AA seq
DB search
MNLVKLAKQQIQDVVQNALKSCIDKGIFELDSIPDIMIEKPKEKSHGDFATNIAMELTRK
LKKNPREIANRIFNAIDLSNTFIEKVEVAGPGFINFFFKKDWLYKVVDVILSESDDYGKV
NIGNGKKVMVEFVSANPTGPMHMGNARGGALGDCLANLLKWAGYNVTKEFYVNDAGNQIE
KFGQSLEIRYRQLKGENIVLPEDCYHGEDIIERVKEYLDEYGDDLANLSSDERRKKLVEF
ALKRNILLMKEHLRKYGIEYDVWFHESSLYESGEVFETIEDLKSRGYTYEKDGALWFAAS
KIDETLKDEVLIRANGIPTYFAADIAYHRNKFEKRGFDIVIDIWGADHHGHVARMKAAMK
ALGIDPEKLIVILMQLVRLVRGKEVVRMSKRTGKAITLIDLIDEIGKDAARFMFNTKSAD
THIEIDLDLVTQQTLDNPVFYVQYAHARTCGIIRALSEEGIVLDKSKIKVELLQQEEELE
LLKKLLELPEEIEIAARNLDVSRVTKYLLDLASMFHAFYNACRVKNENEELMFTRLSLVE
CVRIVINNMLRLLGVDAPEKM
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
ttgaatttagtaaaacttgcaaaacagcagattcaagatgtagttcaaaatgccctaaaa
agctgtattgataaagggatatttgaacttgacagcatcccagatataatgattgaaaag
ccgaaagagaagtctcatggtgattttgcaacaaacatagcaatggagcttacaagaaaa
cttaagaaaaatccaagagagattgcaaataggatttttaacgcaattgatttatcaaat
actttcattgaaaaggttgaagtagcaggtccaggatttataaatttctttttcaaaaaa
gactggctttacaaggttgtggatgtgattttgtctgaaagcgacgactatggaaaagta
aatattggaaatggcaaaaaagtgatggttgagtttgtctcagcgaatccaactggtccc
atgcacatggggaatgcccgcggaggtgcgctgggggattgccttgcaaaccttttaaaa
tgggcaggatacaatgtcacaaaggagttttatgtcaatgatgctgggaaccagatagaa
aagtttggacagagccttgagattagatacagacaactgaagggtgaaaatatagttctt
ccagaagattgttatcatggtgaggatataatcgaaagggtaaaagaatatttggatgag
tatggggatgatttagcgaatttatcttcagatgagagaagaaaaaagcttgttgaattt
gccctaaagagaaatattttgcttatgaaagagcacttgagaaaatatggtattgagtat
gatgtatggtttcatgaaagtagcctttatgaaagtggagaagtttttgagacaattgag
gatttaaaatcaagaggatacacatacgaaaaggatggggcactgtggtttgcagcttca
aagatagatgaaaccttgaaagatgaggttttgataagagcaaatgggattccaacctat
tttgcagctgatattgcttatcacagaaacaagtttgaaaaaagaggctttgacattgtg
atagacatttggggtgctgatcatcatgggcatgttgcaagaatgaaagctgcaatgaag
gcgctcggaattgaccccgaaaagctcatagtaattcttatgcaacttgtgagacttgta
agaggtaaagaagttgttagaatgtctaaaagaacaggtaaagcgataacccttatagac
ctgattgatgaaattggtaaagacgctgcaaggtttatgttcaatacaaaatcagcagat
acccacattgagatagatttagaccttgtgacccagcagacacttgacaaccctgtgttt
tatgtccagtacgctcatgcaagaacatgcggaatcattagagctctttcagaagaaggg
attgtattagataaaagtaaaataaaagtagaacttttgcagcaagaggaagagcttgaa
cttttgaaaaagcttttagagcttcctgaagaaattgagatagcagcaaggaacttagac
gttagcagagtaacaaagtatcttttagacttagcatctatgttccatgctttttataac
gcgtgcagagttaagaatgaaaatgaagaactgatgtttacaaggctttctcttgttgag
tgtgtaagaattgtcataaataacatgctaagactgcttggagttgacgctccagagaaa
atgtaa
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