Clostridioides difficile R20291: CDR20291_0106
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Entry
CDR20291_0106 CDS
T00998
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl00230
Purine metabolism
cdl00240
Pyrimidine metabolism
cdl01100
Metabolic pathways
cdl01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
CDR20291_0106 (nrdD)
00240 Pyrimidine metabolism
CDR20291_0106 (nrdD)
Enzymes [BR:
cdl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
CDR20291_0106 (nrdD)
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Gene cluster
GFIT
Motif
Pfam:
NRDD
ATP-cone
Gly_radical
YjjI-like
Motif
Other DBs
NCBI-ProteinID:
CBE01646
UniProt:
A0A9R0BHK1
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All DBs
Position
139825..142176
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AA seq
783 aa
AA seq
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MVEFVKKRDGRVIPFNEDRITRAIFLAATNVAEREGIVPDYKLSEQLTQEVIKFLNHKYS
ESVPSVEDIQDSVVKVLIETGHAKTSEEYIIYRTERSRIRNSKTRLMKAIEEITFEDAED
ADIKRENANINGNTAMGTMLQYGSTVSKEFCKTHILKPEHSFAHDNGDIHIHDMDFLNMG
TLTCCQIDVKKLFNGGFSTGHGFLREPQDIISYGALAAIAIQSNQNDQHGGQSIPFFDYG
LAEGVYKTFKKFYIGNLAKALKLFKGIENNDVIKNIVYNTEKETNQKVGLKRDELYLNLE
KEKLIQTFDIDDELVNKMQNFAFEESYRETDKKTYQSMEAFIHNLNTMHSRAGAQVPFSS
VNFGTDTSEEGRMVTKNLLLSQERGLGNGETPIFPILIFKVKEGINLNPEDPNYDLFKLS
CRVSAKRLFPNFSFLDAPFNAKYYKKGEPDTEATYMGCRTRVLSNVCGSETVSGRGNISF
TTVNLPRLGIKHGIINNEKANLDGFFEELDEKINLIIEQLLERFEVQGNKKMKNFPFLMG
QGVWKGSDDLVPEDTLKEVIKQGTLTIGFIGLAECLIALIGKHHGESKEAQELGLKIVSH
MRHKMDEATDKYKLNFSLMGTPAEGLSGRFTKIDKKVYGEIKGITDKEYYTNSFHVPVYY
NISAYDKIEIEAPYHELTNAGHITYVELDGDPSDNLEAFETVIKAMKDLGIGYGSINHPV
DRDPICGFSGVITSNICPVCGRNEDESDIKFERIRRITGYLVGTVDRFNNAKKAEVRDRV
KHR
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
ttggttgaattcgtaaaaaaaagagatggaagagtaattccatttaatgaagatagaata
acaagagctatatttttagcagcaacgaatgttgcagaaagagaaggaatagtacctgat
tataaattatctgagcaattaactcaagaagtaataaagtttttaaatcataaatactca
gaatcagttccaagtgttgaagatatacaagattctgtagttaaggttcttatagaaact
ggccatgcaaaaactagtgaagaatatataatatacagaactgaaagaagtagaataaga
aattcaaaaacaagattgatgaaggcaatagaggaaattacctttgaagatgcagaagat
gctgatataaaaagagaaaatgcaaatattaatggtaatacagcaatgggaactatgtta
caatatggaagcactgtatctaaagaattttgtaaaacacatatattaaaaccagaacat
tcttttgctcatgataatggagatatacacatacatgatatggattttttaaatatggga
acattaacttgttgtcaaatagatgttaaaaaactattcaatggtggattttcaacagga
catggctttttaagagagccacaagatataataagttatggtgcattagctgcaattgct
atacaaagcaatcaaaacgatcaacatggaggtcaaagtataccatttttcgattatgga
ttggctgaaggtgtatataagacatttaagaaattctacataggaaatttagctaaagca
ttgaagttatttaaaggaattgaaaataatgatgtgataaagaacatagtatataataca
gagaaagaaacaaatcaaaaagttggtcttaagagagatgaattgtatctaaacttagaa
aaagagaaattaatacagacttttgatatagatgatgaacttgtaaataagatgcaaaac
tttgcatttgaagaatcgtatagagaaactgataaaaaaacatatcaatctatggaagca
tttatacacaatctaaatacaatgcactctagagcaggtgcacaggtaccattttcaagt
gtaaacttcggaacagatacttctgaagaaggaagaatggtaactaagaatcttctatta
tctcaagaaagaggtttaggtaatggagagacaccaatttttccaattttaatatttaag
gtcaaagaaggcataaatttaaatcctgaagaccctaattatgatttatttaaattatca
tgcagagtatcagctaaaagactatttcctaattttagttttttagatgcgccttttaat
gcaaaatattataaaaaaggtgaaccagatacagaggctacatatatgggttgtagaaca
agagtacttagtaatgtgtgtggttcagaaacagttagtggtagaggaaacatatctttt
actacagtaaatttaccaagattgggtataaaacatggtattataaataatgaaaaggct
aatttagatggtttctttgaagaattagatgagaagataaacttaattatagaacaatta
ttggagcgctttgaggttcaaggaaataaaaagatgaagaattttccattcttaatgggg
caaggtgtatggaaaggttctgatgatttagtaccagaagatacactaaaagaagtaata
aaacaaggaacattgacaattggatttataggtttagcagagtgccttattgctcttata
ggtaaacatcatggagaaagtaaagaagctcaagaattaggattaaaaatagtgtcacat
atgagacataaaatggatgaagcaacggacaaatataaattaaatttctccttaatgggt
actccagcagaaggtctttcaggtaggtttactaaaatagataaaaaagtttatggagaa
attaaaggtatcacagataaagaatattatactaattcattccatgtaccagtttattac
aatataagtgcatatgataaaattgagatagaagctccataccatgaattgactaatgca
ggtcatataacatatgtagagttagatggagatccatctgataatttagaggcttttgaa
actgttataaaagctatgaaagatttgggtataggatatggaagtataaatcatcctgta
gatagagacccaatatgcggtttttcaggtgtaataacaagtaatatatgccctgtatgt
ggaagaaatgaagatgaaagtgacatcaaattcgaaagaataagaagaataacaggatac
ttagttggtacagttgatagatttaataatgctaaaaaagcagaagtaagagatagagta
aaacatagatag
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