Clostridium drakei: B9W14_05730
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Entry
B9W14_05730 CDS
T05484
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cdrk
Clostridium drakei
Pathway
cdrk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdrk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B9W14_05730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdrk03019
]
B9W14_05730
Messenger RNA biogenesis [BR:
cdrk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B9W14_05730
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
KH_NusA_2nd
KH_2
Motif
Other DBs
NCBI-ProteinID:
AWI04017
UniProt:
A0A2U8DMN7
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All DBs
Position
1228021..1229562
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AA seq
513 aa
AA seq
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MSPIIYEIIAGVIIAIGLLVEFYVVKNKAYAIKSQAQEESNRLKEETERDAESKKKEAIL
EAKEEVHKLRSDLEKESRDRRNESQRLERRLIQREELLDKKSDMLEKREENISKKQQEIN
EIQANVEKLYEKEREELEKLSGLTTEEAKEILLEEVSKEIKHESAMMIKEVETKAKEEAD
KRAREVITCAIQRCAADHVAETTVHVVTLPNDEMKGRIIGREGRNIRTLETLTGVDLIID
DTPEAVILSGFDPIRREVARIALEKLIIDGRIHPARIEEMVEKAKKEVENDIKEEGEQAT
FETGVHGLHLELIKLLGRLKYRTSYGQNVLKHSIEVAYLAGLMASELGIDPTIAKRAGLL
HDIGKAVDHEVEGPHAIIGSEVAKKYRESAIIVNAIAAHHGDVESISLEAVLVQAADAIS
AARPGARRETLEAYIKRLEKLEEIANTCEGVEKSYAIQAGREIRIMIKPEEIDDAGAIEM
ARNIVKTIENELEYPGQIKVNVIRETRAIEYAK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcctattatatatgaaattattgctggcgtaataatagccattggtttattagta
gagttttatgttgtaaaaaataaagcgtatgctataaaatcacaggctcaagaagagtct
aatagattaaaagaagaaacagaaagagatgctgagtctaaaaagaaagaggctatactt
gaagctaaggaagaagttcataaattaagatcagatttagaaaaagaatcaagagataga
agaaatgaaagccaaaggcttgaaagaaggttaatccaaagagaagaattacttgataaa
aaaagtgatatgttggaaaagagagaagaaaatataagtaaaaagcagcaagagattaat
gaaattcaagcaaatgtagagaaattgtatgaaaaagaaagagaagaattagaaaagctt
tcaggtttaacaactgaagaagctaaagaaattttattagaagaagttagtaaggaaata
aaacatgaatctgcaatgatgattaaagaagtggaaacaaaagcaaaagaggaagcagac
aagagagcaagagaagtaataacttgtgctatccaaaggtgtgcagcagatcatgtagct
gaaactacagttcatgtagttactcttcctaacgatgaaatgaaaggaagaataataggt
agagaaggcagaaacataagaacccttgagactcttactggtgtagatttaattattgat
gatacacctgaagcagtaattctttcaggatttgatccaataaggagagaagtagcgaga
atagcattagaaaaattgattattgatggaagaattcatccagcaagaatcgaagaaatg
gttgaaaaagctaaaaaagaagttgaaaatgatattaaagaagaaggcgaacaagcaact
tttgaaacaggagtacacggtcttcatttagaattaataaagttattaggaagattgaag
tataggaccagttatggtcaaaatgtactaaaacattctatagaggttgcttatttggcg
ggtcttatggcttcagaacttggaatagatccaactatagctaagagggcaggattatta
catgacataggtaaggctgtggatcatgaagtagaagggcctcatgctatcattgggtca
gaagttgccaagaagtatcgagaatctgctataatagttaatgctattgcagctcatcat
ggggatgtagaatctatatccttagaagcggtacttgttcaagcagcagatgcaatatca
gctgcaagacctggagcaagaagagaaactttagaagcttatattaaaagattagaaaaa
ttagaagaaatagcaaacacatgtgaaggggtagaaaagtcatatgccattcaagcaggt
agagaaatcagaattatgataaaaccagaagaaattgatgatgcaggtgctattgaaatg
gcaagaaacatagttaaaaccatagagaatgaattagaatatcctggtcaaataaaggtt
aatgttataagagaaacacgtgccatcgaatatgcaaaatag
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