KEGG   Clostridium drakei: B9W14_05730
Entry
B9W14_05730       CDS       T05484                                 
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
cdrk  Clostridium drakei
Pathway
cdrk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cdrk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B9W14_05730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdrk03019]
    B9W14_05730
Messenger RNA biogenesis [BR:cdrk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     B9W14_05730
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd KH_KhpA-B KH_NusA_2nd KH_2
Other DBs
NCBI-ProteinID: AWI04017
UniProt: A0A2U8DMN7
LinkDB
Position
1228021..1229562
AA seq 513 aa
MSPIIYEIIAGVIIAIGLLVEFYVVKNKAYAIKSQAQEESNRLKEETERDAESKKKEAIL
EAKEEVHKLRSDLEKESRDRRNESQRLERRLIQREELLDKKSDMLEKREENISKKQQEIN
EIQANVEKLYEKEREELEKLSGLTTEEAKEILLEEVSKEIKHESAMMIKEVETKAKEEAD
KRAREVITCAIQRCAADHVAETTVHVVTLPNDEMKGRIIGREGRNIRTLETLTGVDLIID
DTPEAVILSGFDPIRREVARIALEKLIIDGRIHPARIEEMVEKAKKEVENDIKEEGEQAT
FETGVHGLHLELIKLLGRLKYRTSYGQNVLKHSIEVAYLAGLMASELGIDPTIAKRAGLL
HDIGKAVDHEVEGPHAIIGSEVAKKYRESAIIVNAIAAHHGDVESISLEAVLVQAADAIS
AARPGARRETLEAYIKRLEKLEEIANTCEGVEKSYAIQAGREIRIMIKPEEIDDAGAIEM
ARNIVKTIENELEYPGQIKVNVIRETRAIEYAK
NT seq 1542 nt   +upstreamnt  +downstreamnt
gtgagtcctattatatatgaaattattgctggcgtaataatagccattggtttattagta
gagttttatgttgtaaaaaataaagcgtatgctataaaatcacaggctcaagaagagtct
aatagattaaaagaagaaacagaaagagatgctgagtctaaaaagaaagaggctatactt
gaagctaaggaagaagttcataaattaagatcagatttagaaaaagaatcaagagataga
agaaatgaaagccaaaggcttgaaagaaggttaatccaaagagaagaattacttgataaa
aaaagtgatatgttggaaaagagagaagaaaatataagtaaaaagcagcaagagattaat
gaaattcaagcaaatgtagagaaattgtatgaaaaagaaagagaagaattagaaaagctt
tcaggtttaacaactgaagaagctaaagaaattttattagaagaagttagtaaggaaata
aaacatgaatctgcaatgatgattaaagaagtggaaacaaaagcaaaagaggaagcagac
aagagagcaagagaagtaataacttgtgctatccaaaggtgtgcagcagatcatgtagct
gaaactacagttcatgtagttactcttcctaacgatgaaatgaaaggaagaataataggt
agagaaggcagaaacataagaacccttgagactcttactggtgtagatttaattattgat
gatacacctgaagcagtaattctttcaggatttgatccaataaggagagaagtagcgaga
atagcattagaaaaattgattattgatggaagaattcatccagcaagaatcgaagaaatg
gttgaaaaagctaaaaaagaagttgaaaatgatattaaagaagaaggcgaacaagcaact
tttgaaacaggagtacacggtcttcatttagaattaataaagttattaggaagattgaag
tataggaccagttatggtcaaaatgtactaaaacattctatagaggttgcttatttggcg
ggtcttatggcttcagaacttggaatagatccaactatagctaagagggcaggattatta
catgacataggtaaggctgtggatcatgaagtagaagggcctcatgctatcattgggtca
gaagttgccaagaagtatcgagaatctgctataatagttaatgctattgcagctcatcat
ggggatgtagaatctatatccttagaagcggtacttgttcaagcagcagatgcaatatca
gctgcaagacctggagcaagaagagaaactttagaagcttatattaaaagattagaaaaa
ttagaagaaatagcaaacacatgtgaaggggtagaaaagtcatatgccattcaagcaggt
agagaaatcagaattatgataaaaccagaagaaattgatgatgcaggtgctattgaaatg
gcaagaaacatagttaaaaccatagagaatgaattagaatatcctggtcaaataaaggtt
aatgttataagagaaacacgtgccatcgaatatgcaaaatag

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