Coxiella endosymbiont of Amblyomma americanum: Z664_01590
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Entry
Z664_01590 CDS
T03533
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cea
Coxiella endosymbiont of Amblyomma americanum
Pathway
cea03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cea00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Z664_01590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cea03021
]
Z664_01590
03400 DNA repair and recombination proteins [BR:
cea03400
]
Z664_01590
Enzymes [BR:
cea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Z664_01590
Transcription machinery [BR:
cea03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Z664_01590
DNA repair and recombination proteins [BR:
cea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Z664_01590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
CdiI
Motif
Other DBs
NCBI-ProteinID:
AJC50417
LinkDB
All DBs
Position
338948..343207
Genome browser
AA seq
1419 aa
AA seq
DB search
MRDLLKRLKSEKHITEFDALRIRLASPEEIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRDRMGHIELASPVAHIWYLKSL
PSRIGLLLDMTLRDIERILYFETYVVINPGMTALDQNQLLSEEAYLDALEEHGNEFTALM
GAEAIQKLLRDIDVSEEVKTLRSKISVATSETKIKKFIKRLKVLSAFLESGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAILGSNRRPLKSLADMIKGKSGRFRQNLLGKRVDYSGRSVIVVGPT
LKLHQAGLPKKMALELFKPFIFSKLQRGGLATTIKAAKKMVESEVPEVWDILEEVIREHP
ILLNRAPTLHRLGIQAFDPVLVEGKAIQLHPLVCTAYNADFDGDQMAVHVPLTLESQLEA
RSLMMSTNNVLHPANGEPIIVPTHDVILGLYYITRDRVNAKGEGMRFSDVDEAVRAYENG
YTDLHARIIVRIKESLLNRTGEGMEESERLVATVIGRVLLWKIVPKGLSFTLVNQPMTKK
AVTQLLDICYRNLGLETTVTFSDNLMYMGFRYATSSGISIGINDLLVPDEKAKIISQAEE
EIQEMQKQYASGLVTYGEHRNKVIDIWSRTNDQVAKAMMEKIAVEKVTGTQGEEITQSSF
NSIYMMSDSGARGSAAQIRQLAGMRGLMAKPDGTIIETPITANFREGLNVLQYFISTHGA
RKGLADTALKTANSGYLTRRLVDVAQDLVVTEYNCDTNHGIEIMPHIEGGDVVEPLRERV
LGRVLAKSIIDSKSGKELITRDTLLDEKLVNLLEEHGVDRVIVRSAITCETAYGICSMCY
GRDLARGHMVNVGEAVGVVAAQSIGEPGTQLTMRTFHMGGAASRATAINSIEVKSSGKIK
LRNLKIVEQISGSLVAISRSGELVVQDPKGGGEREHYKVPYGATINVRNGDFVKAGQMVA
QWDPHTHPIITEVAGNLHFVDLVDGITMNRQTDELTGLSSIVVTSTRQRTVSGKELRPMV
KLVDENDNSIFLSSGKIPAHYFLPEGTILTKEDGSVVQIGDVLARIPQETSKTRDITGGL
PRVADLFEARRPKDAAVLAEISGIVSFGKDTKDKDRLIITTLDGSTTHEELIPKWRHVNV
FEGETVEKGEVIAEGPPDAHDILRLLGVNAMANYIVNEVQEVYRLQGVKINDKHIEVIVR
QMLRKVKIVDPGETAFLQNEQVEQPLAREENKKIMKKHGQIAKLEPVLLGITKASLATES
FISAASFQETTRVLTAASVSGKRDDLRGLKENVIVGRLIPAGTGFSYHQERRYCREKNES
SSEGILTEKSRPSVSHKDERGITVSEAEEALSAAFKLKN
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
ttgagagatctattaaaaagattaaaaagtgaaaaacatataaccgaattcgacgcactt
cgtatcaggctagcgtctccagaagaaatccgctcttggtcgtacggggaagtaaaaaaa
ccagagactattaattatagaacttttaaacctgaacgtgatggtttgttctgtgctaaa
atttttggtcccattaaagattacgaatgtttgtgtggaaaatataaacgtcttaaacat
cgtggtgtaatctgtgagaaatgcggcgtagaagttaccctagctaaagttcggcgagat
agaatgggtcatattgaattggcttccccagtagctcacatttggtaccttaaatcgtta
ccgtcacgtattggtttattgcttgatatgactttgcgtgacattgagcgtattctttac
tttgaaacatatgtagtaataaatcctggaatgactgcactggatcaaaatcaattactc
tcagaagaagcatatcttgatgcattggaggaacatggtaatgaatttacagcactgatg
ggcgcggaagctattcagaaactgttacgagatatagatgtttctgaagaagtaaaaaca
ctgcgttcaaaaatatcagtcgctacctcggaaacgaaaataaaaaaattcattaagcga
ctcaaagtcttaagtgcattcttggaatctggaaataaaccggagtggatgatattgact
gtgttacctgttttgcccccggatttgcgacctttggtgccattggatggcgggcgtttt
gctacttcagatttaaatgacttgtatcgtcgggtaattaatcgaaataacagactaaaa
cgtcttttagatcttaatgcaccggatattatcgttcgtaacgaaaaacggatgttgcaa
gaagcagtagatgctttattagataatggtcgtcgtgggcgagctattttaggctctaat
cgtcgaccattaaagtctttagcagatatgattaaaggaaaatctggacgttttcgtcaa
aatttgcttggtaaacgagtggattattctggtcgttccgttattgtagtagggccaact
ttaaaacttcatcaagcgggtctaccaaagaaaatggcattagagttatttaaacctttt
atctttagcaaattacaacgaggagggttggcaactactattaaagcagctaaaaagatg
gtggaaagcgaagtaccggaggtgtgggatattcttgaagaagttattcgagaacaccct
attttattaaacagagccccgactttacatcgtttaggtattcaagcatttgatccagta
ttggtggaagggaaagcaatacagttacatccacttgtatgtacagcttataacgcggat
ttcgatggagatcaaatggctgtacatgtcccgctgactttggaatcgcaattggaagcg
cggtctttgatgatgtctactaacaatgttttacatccagcgaacggtgagccaattatt
gtacccactcatgacgtaatactggggctttattatatcacacgagatcgtgtgaatgca
aaaggtgaaggtatgcggttttcagatgtagatgaggcggtgcgtgcttatgagaatggg
tatacggatttacacgcacgtattattgttcggataaaagagagtcttttaaatagaaca
ggagagggtatggaggaaagtgaacgtttggttgccactgttataggacgtgttttgtta
tggaagattgttcctaaaggattatcttttacattggttaatcagccaatgactaaaaaa
gcggtaacgcaattattggatatctgttatcggaatttagggttagagactactgtcact
ttttcggataacttaatgtatatgggtttccgctatgcaacttcttctggtatttctata
ggtataaacgaccttttagtacctgatgaaaaagcaaaaattatttctcaagctgaagaa
gagattcaagaaatgcaaaaacaatatgcttctggattagtaacatacggtgagcatcgt
aataaagtaattgatatctggtctcgcactaatgaccaggtcgctaaagcaatgatggaa
aagattgctgtagaaaaagtaacaggcactcaaggcgaagaaataacccaaagctctttt
aattccatttatatgatgtctgattctggcgctagaggttctgcagcacaaatccgtcaa
ctggctggaatgagaggtctaatggcaaaaccagatggtactattattgaaacacctatt
actgccaattttcgcgagggattaaacgttttgcaatattttatttccactcatggtgct
cgtaaaggtttagctgatactgctttaaaaacagcgaattcaggatatttaactagacgg
cttgtggatgttgctcaagatttagttgttactgaatacaactgtgatactaaccatggt
attgaaataatgccgcatattgaaggaggtgatgtggtggaacctctgcgagaacgagtc
ttagggcgagtcttggcaaaatcgattatagattctaaatctggaaaagaattgataact
agggatactcttttagatgagaaattggttaatttactagaagaacatggtgtagatcgt
gttatagtccgctcagcaattacttgtgagacagcatacggtatttgctcgatgtgttat
ggacgtgatctagcccgtggacatatggtgaatgtaggagaagccgttggtgtagtggcc
gctcaatcaattggtgagccaggcactcaattaactatgcgtacatttcatatgggagga
gctgcttctcgagcaaccgctattaacagcattgaagtaaaatcttctgggaaaattaag
ttgcgtaatttaaagattgtagaacaaattagcggtagtttagtagcaatttctcgctca
ggagaattagtagtgcaagatcctaaaggaggaggggagcgtgagcactataaagttcct
tatggcgcaactattaatgtacgcaatggtgactttgtaaaggctggacagatggtagct
caatgggatcctcatactcatcctattattacagaggtagcaggaaacttacattttgtt
gatttagtggatggtataactatgaatcgacaaactgatgaactgacaggtctgagtagt
attgtagtaacttctactagacaacgcaccgttagtggtaaagaacttcgacctatggtt
aagcttgtggatgaaaatgacaatagtatatttttatcaagtggtaaaattccggcgcac
tatttcttaccggaaggtaccattcttactaaagaggacggttctgtagtccaaattggt
gacgtgttggcacgtatccctcaagaaacttcaaagaccagggacattaccggaggactg
ccgcgtgtagctgatctttttgaagctcgtcgaccgaaagatgccgctgttttagcagaa
atttctggaatagtaagttttggtaaagacactaaagataaagatcgtttaattattact
actctggacggaagtaccactcacgaagagcttattcctaaatggcgccatgtgaatgtt
tttgaaggtgaaacagtagaaaagggtgaagtaattgctgagggccctccagatgctcac
gatattctacgtttactgggagtaaatgcaatggcgaattatattgttaatgaagtacaa
gaagtttatcgattgcaaggagtaaaaattaatgataaacatatcgaagtaatcgtccgc
caaatgttacgaaaagtaaagattgttgacccaggtgaaacagcatttctgcaaaatgag
caggtagagcagcccctcgctcgagaagaaaataaaaaaattatgaaaaaacatggacag
atagcaaaactagaaccagtgttattaggaatcacgaaagcttctttagctactgagtcc
tttatttcggccgcgtcttttcaagaaacaacgcgtgtattaacagctgcttctgtgagc
ggaaagcgtgatgatttacggggtctaaaagagaacgtaattgtcgggagactcattcct
gctggaacaggatttagttatcatcaggaacgtcggtattgtagagaaaaaaatgaaagc
tcatcagaagggatactaactgagaagtcacggccctctgtttcgcataaagacgaacga
gggataacagtcagtgaagcagaagaggctttaagcgcagctttcaaattaaaaaactaa
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