KEGG   Dickeya fangzhongdai ND14b: LH89_17895
Entry
LH89_17895        CDS       T03347                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
ced  Dickeya fangzhongdai ND14b
Pathway
ced02024  Quorum sensing
ced03060  Protein export
ced03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ced00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    LH89_17895
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LH89_17895
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LH89_17895
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ced02044]
    LH89_17895
Enzymes [BR:ced01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     LH89_17895
Secretion system [BR:ced02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   LH89_17895
  Eukaryotic Sec-SRP protein
   LH89_17895
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 cobW AAA_30 AAA_31 VirC1 KTI12 AAA_33 YqeC Fe-ADH_2 APS_kinase AAA_24 AAA_16 ATP_bind_1 Mg_chelatase AAA_14 TsaE Rad17 Helicase_RecD
Other DBs
NCBI-ProteinID: AIR70991
LinkDB
Position
4022579..4023940
AA seq 453 aa
MFENLTDRLSRTLRNISGRGRLTEDNIKDTLREVRMALLEADVALPVVRDFINRVKDQAV
GHEVNKSLTPGQEFVKIVQNELVTAMGEVNQALNLAAQPPAVVLMAGLQGAGKTTSVGKL
GKFLREKQKKKVLVVSADVYRPAAIKQLETLAQTVGVDFFPSEAHEKPIDIVNRALQHAK
LKFYDVLLVDTAGRLHVDDAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVILTKIDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFYPDRIASRILGMGDV
LSLIEELESKVDRSQAEKLAKKLKKGDGFDLTDFLDQLKQMRNMGGMASMMSKLPGMGQI
PDNVKSQMDDKVLVRMEAIINSMTQQERAKPEIIKGSRKRRIAMGSGMQVQDVNRLLKQF
DDMQRMMKKMKNGGLAKMMRGMKGMMPPGFPGR
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgtttgaaaatttaaccgatcgactatcgcgcactctgcgcaatatcagcggccgtggg
cggctgacggaagacaatatcaaggatacgctgcgtgaagtccgtatggcgctgctggaa
gcggacgtggcgctgccggtggtacgtgacttcatcaaccgtgtaaaagatcaggcggtt
ggtcacgaagtcaacaagagcctgacgccgggacaagagttcgtcaagattgtgcagaac
gagctggtgaccgccatgggcgaggtcaaccaggcgctcaatctggctgctcagccgccg
gcggtagtactgatggcgggcctgcaaggggcgggtaaaaccaccagcgtcggtaagctg
ggcaaattcctgcgtgaaaaacagaagaagaaagtgctggtggtgtcggcggacgtgtac
cgcccggcggcgatcaagcagttggaaacgctggcgcagaccgtcggcgtcgatttcttc
ccctcggaagcgcatgaaaaacctatcgacatcgttaaccgtgcgctgcagcacgccaaa
ctgaaattctacgatgttctgctggtggataccgccggtcgtctgcatgtcgatgacgcc
atgatggacgaaatcaagcaggtgcatgcgtcgatcaatccggtggaaacgctgtttgtg
gttgacgccatgaccggtcaggatgcggcgaatacggccaaagcctttaacgaggcgttg
ccgttgaccggggtgattctgaccaagattgatggtgatgcccgtggcggtgcggcgctg
tctatccgccatattaccggtaaaccaatcaaattcctgggcgtcggcgaaaagaccgac
gcgctggagccgttctacccggatcgtatcgcttcgcgcattctcggtatgggcgatgtg
ctctcgctgattgaggaactggaaagcaaggtcgaccgttctcaggccgagaaactggct
aaaaagctgaagaaaggcgatgggtttgatctgaccgatttcctggatcagctaaagcag
atgcgcaatatgggcggtatggccagcatgatgagcaagctgccgggcatgggacagatt
ccggataacgtgaaatcgcagatggatgacaaggtattggtgcgaatggaggcgatcatc
aattccatgacgcaacaggagcgtgccaagccggagatcatcaaaggttcgcgtaagcga
cgtatcgcgatggggtccggcatgcaggtgcaggatgtcaaccgactgctgaaacagttt
gatgatatgcagcgcatgatgaaaaagatgaaaaatggtggcctggccaagatgatgcgc
ggcatgaaagggatgatgccgccaggttttccgggccgctaa

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