Corynebacterium endometrii: CENDO_01830
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Entry
CENDO_01830 CDS
T06552
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cee
Corynebacterium endometrii
Pathway
cee03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cee00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CENDO_01830 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cee03021
]
CENDO_01830 (rpoB)
03400 DNA repair and recombination proteins [BR:
cee03400
]
CENDO_01830 (rpoB)
Enzymes [BR:
cee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CENDO_01830 (rpoB)
Transcription machinery [BR:
cee03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CENDO_01830 (rpoB)
DNA repair and recombination proteins [BR:
cee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CENDO_01830 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QCB27664
UniProt:
A0A4P7QFX1
LinkDB
All DBs
Position
395581..399099
Genome browser
AA seq
1172 aa
AA seq
DB search
MSRNPREVLEGPILAVSRQTKSVANIPGAPTRYSFAKISEPIAVPGLLDLQLNSFAWLVG
SPEWREQQQAERGDDARITSGLEDILEELSPITDYSGNMSLSLSEPHFWPVKNTVDECKE
KDINYSAPLYVTAEFFNKETQEIKSQTVFIGDFPMMTDKGTFIVNGTERVVVSQLVRSPG
VYFDQTIDKSTERPLHAVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWT
EEQIKERFGFSELMMSTLESDGVANTDEALLEIYRKQRPGEQPTRELAQSLLENAFFRAK
RYDLARVGRYKVNRKLGLGGDHEGLMTLTEEDIAVTLEYLVRLHAGEREMEAPNGEIIPI
NTDDIDHFGNRRLRTVGELIQNQVRVGLARMERVVRERMTTQDAESITPTSLINVRPVSA
AIREFFGTSQLSQFMDHNNSLSGLTHKRRLSALGPGGLTRDRAGIEVRDVHPSHYGRMCP
IETPEGPNIGLIGSLASYARVNSFGFIETPYRKVVDGRITDEVVYFTADEEDRYAIAQAE
VEQDAEGNIIGDRIEVRLADGAIGVTDGKGVDLVDVSPRQSVSVATAMIPFLEHDDANRA
LMGANMQRQAVPLVRSEAPYVGTGMEQRAAYDAGDLVITPKAGVVENVTGELITIMDDEG
QRDTYMLRKFERTNQGTNYNQTPLVNIGDRVEAGQVLADGPGTHNGEMSLGRNLLVAFMP
WEGHNYEDAIILNQRIVEEDILTSIHIEEHEIDARDTKLGPEEITREIPNVSDDVLRDLD
ERGIVRVGADVRPGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVPHGETG
KVIGTARFSREDDDDLNPGVNEMIRVYVAQKRKIQDGDKLAGRHGNKGVVGKILPPEDMP
FMADGTPVDVILNTHGVPRRMNIGQVLEVHLGWLAHAGWKVDTEDPKNAELLKTLPEELY
DVPADSLTATPVFDGATNEEISRLLASSKPNRDGDVLVNEEGKAQLFDGRSGEPYKYPVS
VGYMYMLKLHHLVDEKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMQAYGAAYT
LQELLTIKSDDVVGRVKVYEAIVKGENIPDPGVPESFKVLLKELQSLCLNVEVLSADGTP
MELSGTDEDDMESGSSLGINLSRDENSSADIA
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgcaatccgcgtgaggtgctggaaggacccatcttggcagtctcccgccagacc
aagtcagtggccaatatccccggagccccgacgcgctactcgttcgcgaagatcagcgaa
cctatcgccgtcccgggcctccttgatctacaacttaactcctttgcatggctcgttggt
tcgccggagtggcgcgaacagcagcaggcagagcgcggcgacgatgcacgcatcacgtcc
ggccttgaggacatcctggaggagctttctcctatcacggattactccggcaacatgtct
ctgtccctgtctgagccccacttctggccggtgaagaacaccgtcgatgagtgcaaggaa
aaggacattaactactccgcgccgttgtacgtgacggcggagttcttcaacaaagagacg
caggaaattaagtctcagaccgtcttcattggtgacttcccaatgatgacggacaagggc
accttcatcgtcaacggcaccgagcgtgtcgtggtgtcccagctggtgcgctccccaggc
gtctacttcgaccagacgattgacaagtccaccgagcgcccgctgcacgcagtgaaggtc
atcccttcccgcggtgcttggttggagttcgatgtggacaagcgcgataccgtcggcgtc
cgcatcgaccgcaagcgccgccagccggtcaccgtgctgctgaaggccctgggctggacc
gaggagcagatcaaggagcgcttcggcttctccgagctcatgatgtccaccctcgagtct
gacggtgtggcaaacaccgatgaggcgctgctggagatctaccgcaagcagcgcccgggt
gagcagcctacccgcgagctggcgcagtccctgctggagaacgccttcttccgcgccaag
cgctacgacctggcccgcgtgggccgctacaaggtcaaccgcaagctggggctcggcggc
gatcatgagggcctgatgaccctgaccgaggaagacatcgccgtcaccctcgagtacctg
gtgcgcctgcacgcaggtgagcgagagatggaagcgcctaacggcgagattatcccaatc
aacaccgatgacatcgaccacttcggtaaccgccgcctgcgcaccgtgggtgagctcatc
cagaaccaggtccgcgttggcctggcgcgcatggagcgcgtcgtccgtgagcgcatgacc
acccaggatgctgagtccatcactcctacctccctgatcaacgtgcgtccggtttccgca
gctatccgtgagttcttcggtacctcccagctgtcccagttcatggaccacaacaactcc
ctgtctggcctgacccacaagcgccgcctgtccgccttgggcccaggcggcctgactcgt
gaccgcgccggcatcgaggttcgagacgttcacccatctcactacggccgcatgtgccct
attgagacccccgaaggtccaaacattggtctgattggctccctggcttcttacgcccgc
gtaaactcctttggtttcatcgagactccttaccgcaaggtggttgacggccgcatcacg
gatgaggttgtctacttcaccgccgatgaggaggaccgttacgccatcgcgcaggccgag
gttgagcaggacgctgagggcaacatcatcggcgaccgtatcgaggttcgcttggctgac
ggcgccatcggcgtgaccgacggcaagggcgttgacctggtcgacgtatcccctcgccag
tccgtttccgtggcaaccgccatgattccgttccttgagcatgacgacgcaaaccgtgca
ctgatgggtgccaacatgcagcgccaggccgtgccactcgttcgctccgaggccccatac
gtgggcaccggcatggagcagcgtgcggcgtatgacgcgggcgacctggttatcacccct
aaggccggcgttgtagaaaacgtcaccggtgagctcatcaccatcatggacgatgagggc
cagcgtgacacctacatgctgcgcaagttcgagcgcaccaaccagggcaccaactacaac
cagaccccactggtaaacatcggtgaccgcgttgaggccggccaggtcctggcggacggc
ccgggtacccacaatggtgaaatgtccctgggccgcaacctgctggttgcgtttatgcct
tgggaaggccacaactacgaggatgcgatcatccttaaccagcgcattgtggaagaggac
atcttgacctccatccacatcgaggagcacgagattgacgctcgtgataccaagctgggc
cccgaggaaatcacccgcgagatcccgaacgtctccgatgacgtcctgcgcgatcttgac
gagcgcggcattgtccgcgtcggcgccgacgtgcgccccggcgacatcctggtgggcaag
gttacgcctaagggcgagaccgagctgaccccggaggagcgcctgctccgcgcaatcttc
ggcgagaaggctcgcgaggttcgcgatacctcgatgaaggttccacacggcgagaccggc
aaggtcatcggcacagcccgcttctcccgcgaggatgacgacgatctgaacccgggcgtc
aacgagatgatccgtgtttacgtggcccagaagcgcaagatccaggacggcgacaagctc
gccggccgccacggcaacaagggcgttgttggcaagatcctgccgcccgaggacatgcca
ttcatggccgacggtaccccggtggacgtcatcctgaacacccacggcgtgccccgccgt
atgaacatcggtcaggtgctcgaggttcacctgggctggctggcacacgccggctggaag
gttgacactgaggatccaaagaacgccgagctgctcaagactctgcctgaggagctctac
gacgttccggccgattcgctgaccgcaaccccggtatttgacggtgcgaccaatgaggaa
atctcccgcctgctggcttcctccaagccaaaccgcgacggtgacgtactggtcaatgaa
gaaggcaaggcgcagctgtttgacggccgctccggcgaaccgtacaagtacccggtttcc
gtgggctacatgtacatgctcaagctgcaccacctggttgacgagaagattcacgctcgt
tccaccggcccttactccatgattacccagcagcctctgggcggtaaggcacagttcggt
ggccagcgcttcggcgagatggaggtgtgggcgatgcaggcatacggcgcggcctacacc
ctccaggagctgctcaccatcaagtctgatgacgtggttggccgcgtcaaggtctacgag
gcgattgttaagggcgaaaacatcccggatccaggcgttcctgagtccttcaaggtgttg
ctcaaggagcttcagtccctgtgcctgaacgtggaggtcctctccgcggacggcaccccg
atggagctctccggtaccgatgaggatgacatggaatccggttcctcactgggcattaac
ctgtcccgtgatgagaactcctccgcagacatcgcataa
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