Corynebacterium epidermidicanis: CEPID_12110
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Entry
CEPID_12110 CDS
T03955
Symbol
nei1
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cei
Corynebacterium epidermidicanis
Pathway
cei03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CEPID_12110 (nei1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cei03400
]
CEPID_12110 (nei1)
Enzymes [BR:
cei01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CEPID_12110 (nei1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CEPID_12110 (nei1)
DNA repair and recombination proteins [BR:
cei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CEPID_12110 (nei1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
TetR_C_25
Nudix_N_2
Motif
Other DBs
NCBI-ProteinID:
AKK04245
UniProt:
A0A0G3GUR2
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All DBs
Position
2567256..2568056
Genome browser
AA seq
266 aa
AA seq
DB search
MPEGHVIHRLARDLNSAFTQTTPQVSSPQGRFATEAAQLDQQTFIGADAHGKHLFITFDH
PLQIHIHLGLIGKFHLSEPKDPTPTTRLRIANDHTTADLIGPQWCRLITEDARAHTLAKL
GADPLREDADPEWVWTRVHRSNRTIGSLLMDQKLFAGVGNIYRAEPLFRLGISPFLPGKQ
LSRPLFDALWTDLTELMADGVTKGRIDTIRPEHTPEAMGRPPRKDDHGGEVYVYRRAGQP
CHVCGTPIEHQVMEGRNLFWCPGCQR
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaggccacgtcatccatcgtctcgcccgcgacctcaactccgcgttcacccag
acaacaccgcaggtctcgtcgccgcagggccggtttgccaccgaagcagcccagctggat
cagcagaccttcataggagccgacgcccacggcaaacacctcttcatcacgttcgaccac
ccgctacagatccacattcacttaggcctgatcggcaagttccacctcagcgagccaaaa
gatccaacacctactacccggctgcgtatcgcaaacgaccacaccacagccgacctcatc
ggcccgcaatggtgccgactcatcacggaggatgcccgcgcccacaccctcgcaaagctc
ggcgcggaccccttgcgcgaagatgccgatccggaatgggtgtggacacgcgtacaccgc
tccaaccgcaccatcgggtccctgctcatggaccagaagcttttcgcgggcgtcggcaat
atttaccgcgcggagcccctatttcgcctgggtatcagcccgttcctgcccggcaagcag
ctatcgcgcccgcttttcgacgccctctggacggatctcaccgagctgatggccgacggc
gtgacgaaaggcaggatcgacaccattcgaccagagcacaccccggaggcgatggggcgc
ccgccgcggaaagacgaccacggcggggaggtctacgtctatcgacgcgccggccagccc
tgccacgtgtgtggcaccccgatcgagcaccaagtgatggaggggcgcaacctgttttgg
tgcccggggtgtcagcgctag
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