Caenorhabditis elegans (nematode): CELE_R13A5.1
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Entry
CELE_R13A5.1 CDS
T00019
Symbol
cup-5
Name
(RefSeq) Polycystin cation channel PKD1/PKD2 domain-containing protein
KO
K04994
mucolipin 3
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
CELE_R13A5.1 (cup-5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cel04040
]
CELE_R13A5.1 (cup-5)
Ion channels [BR:
cel04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
CELE_R13A5.1 (cup-5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MCLN_ECD
PKD_channel
Ion_trans
X8
Orthoreo_P10
Motif
Other DBs
NCBI-GeneID:
176074
NCBI-ProteinID:
NP_001022721
WormBase:
WBGene00000846
Ensembl:
WBGene00000846
UniProt:
H2KYK0
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Position
III:<7584181..7591581
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AA seq
629 aa
AA seq
DB search
MSRIFRSQASRSMRLEQIPLESMSRRSTTDRSDFNDNASNASSNASRRPTINFQEIMEDL
PHHERETGERLRRHLQFFFMNPMEKWKVRHQLPYKLVLQVLKIVFVTMQLILFAEMRMSH
VDFLEDTTTVMRHRFLKEWNDDRDALQYPPAEGRYSVYDDQGLSEHLSFLINSYYSIRND
SFASFSYDVVSHPSGNLGAQISFESIPPIEVLIDRISNVTVNNNTYNFDIREVKDTKRLN
LTETEVFQIGQSDDAVRDILATRGITFLPEDALKISTVQFKFRLRTIHYSPTAGDQKPEC
YKISVSIKFDNSRHTGQVHVTLSTVVSYVNVCNGRIIKGVGWSFDTLLIGGTDIFVLILC
ILSLILCCRALIKAHLLQIKTSDYFENVLKNKITVTDQLDFLNLWYVMIVVNDALIIIGT
VAKISIEFQDFDNSLFTLTSIFLGMGALLVYVGVLRYFGFFSQYNILMLTLKRSAPNIMR
FMTCAIVLYAGFLIAGWVIIGPYSMKFRTLAESSEALFSLLNGDDMFATFYTINDSNTVI
KVFGTVYIYLFVSLFIYVVLSLFIAIIMDAYEVVKDRYSDGLRAIEKRGCLRDFVESNPP
PSELGSPTTRSAYAPSNLLNLVFNHSPTR
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaatattcagaagccaagcttcgagatcgatgcggttagagcaaattcccctc
gaatcgatgtctcgccggagcacaactgatcgttcagacttcaacgataatgcttcgaat
gcttcttcaaatgcttctcgaaggccaacaataaattttcaagaaataatggaagatctt
ccgcaccacgaaagagaaaccggcgaacgtcttcgccgtcatctccaattcttttttatg
aatccaatggagaaatggaaagtcagacatcaactgccctataagttggttctacaagtg
ctcaaaatagttttcgttaccatgcaattaattttattcgcggaaatgcgcatgtctcat
gttgattttctcgaagacaccacaacagttatgagacatcgatttttaaaagaatggaat
gacgacagagatgcattacaatatccaccagctgaaggaagatattcggtttatgatgat
caaggattatccgagcatttgagctttttgattaattcttattattcaattcgcaatgat
tcatttgcttcattttcctatgacgttgtaagtcatccatctggaaatcttggcgctcaa
attagttttgaatctattccacctattgaagttcttatcgatcgaatttccaacgtaaca
gtgaacaataacacttataatttcgacattcgtgaagtgaaagacacgaaacgtctgaat
ctaacagaaacggaagtcttccaaatcggacaatccgatgatgctgttcgagatattctc
gccactcgtggaatcacatttctcccagaagacgcgctcaagatatcgacggtccaattc
aaatttcgactacgaacaattcattattcaccaacagccggagatcagaaaccagaatgc
tataagatatcagtttctatcaaatttgataattcaaggcatacaggacaggttcatgtc
actctatcaactgtggtttcttatgtgaatgtttgtaatggaaggatcatcaaaggtgtt
ggatggtcatttgacacacttttaatcggcggaaccgatattttcgttctcattctttgc
attctatcactgattctctgctgccgagccctcatcaaagcccatctacttcaaatcaaa
acaagcgactattttgagaatgtactcaaaaataagatcaccgttaccgatcaactcgat
tttctgaatttgtggtatgtgatgattgtggtcaacgatgcgcttattatcattggaact
gttgcaaaaatatccatcgagtttcaggatttcgacaattccctcttcacgctaacttcg
attttcctcggaatgggagctttgctggtatatgtcggagttcttcgatattttggattt
ttcagtcaatataatatcctcatgctcacgctcaaacgatcggcacccaatatcatgcgc
ttcatgacgtgtgccattgtactttacgctggtttcttgattgccggatgggttattatt
ggcccgtacagtatgaagttccgtacactggcagaatcatcggaagctctattttcgctt
ctcaacggtgacgatatgttcgccacgttttacactattaatgattccaatacagttatc
aaggtatttgggacagtgtacatctacctattcgtgtcactctttatctatgtagtatta
tcactgttcattgcaattatcatggatgcatatgaagtcgtcaaggatcgctactcagac
ggtcttcgagccatcgaaaaacgtggatgtcttcgcgatttcgtggaatcgaatccaccg
ccgtcggaactcggctcaccgacgactcgatccgcctacgcaccgtctaatctgctcaat
ctggttttcaatcattctccaacccgctga
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