Caenorhabditis elegans (nematode): CELE_T14G10.2
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Entry
CELE_T14G10.2 CDS
T00019
Symbol
pxf-1
Name
(RefSeq) Rap guanine nucleotide exchange factor
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
CELE_T14G10.2 (pxf-1)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
cNMP_binding
RA
PDZ
RA_2
Motif
Other DBs
NCBI-GeneID:
177894
NCBI-ProteinID:
NP_001023389
WormBase:
WBGene00004254
UniProt:
G5EDB9
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All DBs
Position
IV:complement(<10164288..>10174341)
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AA seq
1470 aa
AA seq
DB search
MDPRKPRQDPVNDARFYESLIKPPHLRTPDDIRNVYEQLRQLDTFSNLFIGPLKALCKTA
RYERHPAQYILFRDGDVARSWYILLSGSVFIENQIYMPYGCFGKRTGQNHRRTHNCLLLQ
ESEMIVIDYPTEPQSNGMSPRTPPRGIHHSGEPVHQKTPRKSAPNMSVDSIAMPPPPVPP
RPLRLPQTAAKGPAPLPPRGLPRTYPLDFPVDIPTTSSSSSNTSYNDQHRSQVYLNGLSA
DEDTLVRVKHRREKSNSVGGQAQNGISTARRLRGRSTASSTTTEGETASNEGADSDEDEG
SMPSQESSSGGFMDLRDSVRECLEKEPSERNSEDLAVLLDFMQHMSAFAALPMSIKRQLC
LKMVFAVVNDAGTVVLAHNEKLDSWSVIVNGCVEVVKPSGERVEYKLGDSFGAEPTPATQ
IHIGEMRTMVDDCEFVLVEHRDFCSIMSTIGDHIEKDRDGLTGEVVSEVERRTVGTHCGQ
VLIKGKPDKLIHHLVDERDHNVDPHYVDDFLLTYRVFIRDPTTIFEKLMLWFADSIYRDK
VARLVLLWVNNHFNDFETNDEMWNLLERFEGALERDGMHSQLSLLNIACSVKAKPRQVIL
TRRKDDKMMMRLVGGQESGNSVYVAEVFPDTSAAREGVKRADEMLEVNQQSAKYLSAKKA
EDLLTGSLSLTLMLKNNVLGYKETIGKIEHNKPKNGTSRSGAGIPMVIPVHKTSITGKKS
STTSSKSGMMEKLMTILKSSKEDSMDFTDEAKISSADLRPSRSNPDITSISQYYGPVRSE
CPEHVLKIYRNDQTFKYLPVYKETSAQNVVQLALQEFNMTAEGSPEWSLCECTVTIDGVI
KQRRLPPQMENLAERIALNSRYYLKNNSRSEPLVPDELAPELLKEAQTQLLSLNAQVVAA
QLTLQDFSVFSAIEPTEFLDNLFKLDSKYGSPKLEEFEQLFNREMWWVATEICTERHVQK
RAKLIKKFIKVARYCRDLRNFNSMFAIMSGLDKPAVRRLHSSWERVSSKYIRMLDEIHQL
VDPSRNMSKYRQHLAEVAQEPPVVPIYPVIKKDLTFAHDGNATYSEKLINFEKLRLIAKS
IRGVMKLSSAPYEIASMAERSGGVVMDALLHMNSFENSNVATMRKGMSGKQNQPRKKVYE
QALMVRKVKSYLEGLHVVDNEMELDSMSYDIEPQVQTAHRGANSSSTANIRRVPSPTPSS
LSSQSAGSADQSSRHRLLFNGTGSISSAGGGSKFGVESPQAVQKMLSLVQNSKVKGAPPQ
ITSPSTSARSSLQRNMPRVTGRQATSSAQGPVQLNEETSTVTTYYQSDNGRRQRSGSEGR
FDNIPPSTFYLTSDGLTVSPRQSLSVVIPTHPHGHSPTSPRCRSRSPASSGCSSFSTIAS
IAATSMAAAPSAFVSNPYQHHQTVRGHVIGHRPMPIVTSGSATLPNHVSPRGLPPKSRPT
ILPGSHTNSSSRMGTIKEATFLTSEQVSRV
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atggatcctcggaaacctcgacaggatccagtcaatgatgctcgtttttacgaatccctc
attaaaccaccgcatttaaggacaccagatgatattcgaaatgtatacgagcaattgcgg
cagctcgacaccttcagtaatttgtttataggtccattgaaagctctctgtaaaactgct
cgatatgaaaggcatccagcacaatatattctttttcgggatggagatgtcgcacgaagc
tggtacattctactatcaggatcagtttttattgaaaatcaaatctacatgccttacggg
tgctttggcaagcgaacaggacaaaatcatcgaaggactcataattgtctgctgttacaa
gaatctgaaatgattgtgattgactatccaacggaaccccaatcgaatggaatgtcacca
cgaacacctcctcgaggaattcatcattcaggagaaccagttcatcagaaaactcctaga
aaatcggcaccaaatatgtcagttgattcaattgcaatgccgccacctccagttccacct
cgtcctctacgtcttccacaaactgcagctaaaggcccagctcctctgccgccacgtggt
ttacctagaacatatccattggattttcctgtagatattccaacaacgtcatcatcatca
tcaaacacttcatataatgatcaacatcgtagtcaagtatatttgaatggattatccgct
gatgaagatactcttgttcgagtgaagcatagaagagagaaaagcaattcagttggagga
caagcccagaatggaatttcaactgctcggaggcttcgaggaagaagcacagcatcatct
acaactactgaaggtgaaacagcttccaacgaaggagcagattcagacgaagatgaaggg
agtatgccttcacaagaatcaagtagtggaggattcatggatctgcgagattctgtccga
gaatgtcttgaaaaggaaccttcagaacgaaattcagaagatcttgcagttttactcgat
ttcatgcaacatatgtccgcatttgccgctttgccgatgtcaataaaacgtcagttatgc
ttgaaaatggtttttgcggtagtaaacgatgcgggtacggtagttcttgctcacaacgag
aaactcgattcatggtctgtaatagtgaatggatgtgtagaagttgtaaaaccatctggt
gagcgtgttgaatacaagctcggagattcatttggtgcagaaccaacacctgcaacacaa
attcatatcggtgaaatgagaacaatggtggatgattgtgaattcgtacttgttgaacat
cgagatttttgttcaattatgtcgacaattggtgatcatattgaaaaagatcgagacggt
ttgacaggagaagttgtgtcagaagttgaacgaaggactgttggaactcattgtggacaa
gtgcttatcaaaggaaaaccagacaaattaatacaccatttagtggatgaacgagatcat
aatgttgatccacactatgtcgacgattttctattgacctatcgagttttcataagagat
ccaactacgattttcgagaaattgatgctctggtttgccgattctatatatcgagataaa
gttgcaagattggttcttctatgggttaataatcattttaatgatttcgagacgaacgat
gagatgtggaatctattagaacgttttgaaggagcattagaaagagatggaatgcattct
caactatctttattgaatattgcatgttctgtaaaagcaaaacctcgacaagtgatatta
acaaggagaaaagatgacaaaatgatgatgagattagttggaggtcaagaatcaggcaac
tctgtatacgtggccgaagtcttcccagatacgtcagcagcgagagaaggtgtgaagaga
gctgatgaaatgttagaagtgaatcaacaatcagctaaatatttatcagccaaaaaagcg
gaagatctactaacggggtctctgtcattaactttgatgctcaaaaataatgttcttggg
tacaaggagacaattggaaaaattgaacataataagcctaaaaatggaacatcaagatct
ggtgccggaattccaatggtaattccagttcacaaaacttcaataactggaaagaaatca
tcgacgacaagtagcaaatcgggtatgatggaaaaattgatgacaatattgaaatcatca
aaagaagattcaatggatttcactgatgaagctaagatatcatcagccgatcttcgtcca
agtcgatccaatcctgatatcactagcatatcacagtactacggaccagtacgaagcgaa
tgtcctgaacacgttctgaagatttatcgaaatgatcagacattcaaatatctgccagtt
tacaaagaaacgtctgctcagaatgttgtacaactggcattgcaagagtttaatatgaca
gcagaaggaagtccagaatggtcactttgtgaatgtactgttacgattgatggagttata
aaacagagaaggttaccaccacaaatggaaaatttggctgaaagaatagctttgaattcg
agatattatctgaaaaacaatagtcgatctgaacctcttgtacctgatgaattggctccc
gaacttttgaaagaggcccaaactcaactgctcagtttaaatgctcaagtcgttgctgct
caactaactttgcaagacttttcagttttttcagcaattgaaccaacagaatttctagat
aacttattcaagctggattccaagtacggctccccaaaacttgaagaattcgaacagtta
ttcaatcgtgaaatgtggtgggtggcgacagagatttgcacagaaagacatgttcaaaaa
cgtgcaaaactgattaaaaagtttataaaagtggcgagatattgtcgggatcttcgaaat
ttcaattcaatgtttgctattatgagtggacttgataagccagcagttcgtaggttgcat
tccagttgggaacgggtttcgagtaaatacattcgtatgcttgatgaaatccatcaactt
gtcgatccttctcgtaatatgtcaaagtatcgtcaacatcttgctgaagtcgcccaagaa
ccgcctgttgtcccaatttatcctgtaatcaaaaaagatctcacatttgctcacgatggt
aatgcaacatattctgaaaaactaatcaatttcgagaagcttcgacttattgcaaaatca
attcgaggtgtaatgaaattgagtagtgcaccttatgaaattgctagtatggcagagagg
agtggtggagttgtaatggacgctcttcttcatatgaattcattcgaaaattcaaatgta
gccacaatgaggaagggaatgagtggaaaacagaatcagccacgaaaaaaagtttatgaa
caagctcttatggtacggaaagtgaaatcatatctcgaaggattacatgttgttgataat
gaaatggaattggattcaatgagttatgacattgaaccacaagttcagacagctcaccgt
ggtgctaattcatcatcgactgcaaatattcgtcgtgttccatctccaactccatcgtca
ctttcctctcaatcagccgggtcagccgatcaatcatctcggcatcgtcttcttttcaat
ggaaccggctcaatttcgtcagctggtggtggttctaaatttggagtcgaatctccacaa
gctgtacaaaaaatgctgtcacttgttcagaattccaaagttaaaggtgctccacctcaa
atcacatctccatccacatcagcaagatcctctcttcaacggaatatgccacgtgtaact
ggtcgacaagcgacatcctcggctcaagggccagttcaactgaatgaagagacgtctacg
gttacgacatattatcaatcagataatgggcgccggcaacgatctggatccgaaggaaga
tttgataatattccgccatcaaccttctatctaacatccgacggtcttactgtatcaccc
agacaatcgttgtctgttgtgattccaacacatcctcatggccactctccaacatcgcca
cggtgccgctcgcgatcaccggcatcttccgggtgttcttccttctccaccattgcctca
atcgccgctacctcgatggcagccgcaccttcggcatttgtctccaatccgtaccaacac
caccaaaccgtccgtggacatgtcataggacatcgtccaatgccaatcgtcactagtggt
tcagccacactcccgaatcatgtttctccacgaggtttaccaccgaaatctcgtcctaca
atcctacctggttcacacaccaattcttcatcaagaatgggtactatcaaagaagctaca
ttcctgacatctgaacaagtatcgcgagtttaa
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