Caenorhabditis elegans (nematode): CELE_T21C9.2
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Entry
CELE_T21C9.2 CDS
T00019
Symbol
vps-54
Name
(RefSeq) Vacuolar protein sorting-associated protein 54
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cel01009
]
CELE_T21C9.2 (vps-54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cel04131
]
CELE_T21C9.2 (vps-54)
Protein phosphatases and associated proteins [BR:
cel01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CELE_T21C9.2 (vps-54)
Membrane trafficking [BR:
cel04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
CELE_T21C9.2 (vps-54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
Sec8_N
FA_desaturase_2
ANC1_spectrin
Motif
Other DBs
NCBI-GeneID:
179473
NCBI-ProteinID:
NP_001256226
WormBase:
WBGene00006934
Ensembl:
WBGene00006934
UniProt:
Q22639
LinkDB
All DBs
Position
V:complement(<10566402..>10576419)
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AA seq
1058 aa
AA seq
DB search
MKSMDDRTVGLISASSSRASLKIQPEIGYPRICDYCQPIIELMTASEFARHIRQDHTTKE
GGSFLCRYGEHGVCQKLPLEGVCDLDFEAHIRRCHTSSQPAGYSSPTSSLVASYTEDSEE
TASLRSIRLTSDRDTPTIEKKKFTLHSFTQNLSAVLADPSRSRSDLTTFFTRHWGDSFVP
TQPVPQSKRLARLADSAFDSYCQSAGESYRRYQAIKRALRLSHADGGVGIGDERQDAEDL
PTIFIDPRFTLGDSSTFSDVFTVPANDDLDALKQTLSGRNVIPATPLEIATNRKPGEFRD
YEALQNRLEMMHDVVDGRLAGKLVAKTDDFWQVVRSYSGLQEQLANALQCVMVVRKNLKR
VDELVCDQSKKIVEVHERYEQKKKLLAKLHDISCLREAQSTVQMMLSQGDYPKAIECIET
SLDVLSKELNGVTCFRHLASQLRELYTVIGRMMNEDFASLIQKELGVKPEAGTMIQAEGE
LSAVLLGLMRMRKYSFIAVLREEIIEGVKSVMRQVIKNQILNNGVDLNDFDPSLTQLGEP
VRRMKHADFLKTVKAVMDEEFYFCKRLEALQDILLETVERANPLHRHGSEDIIVERIEEA
KDIHESESDDEVGTTFSKSASSGGFSVGGSALSSNASATTLLSIEVRSEAFLRHVLPLIA
EFGHQCAQQRISRLLIARAKNASVTEATTPTQLSECIKLVKEFQSKCDKEGWYSTQNQKV
GGLGRSVNKLSMDYIEKFHAARKIRIGNMLDTELWKATDVSIVDQNIVDMAMETGQLRNT
KRIDDGPIKKSFKRTESAVTIDSTTSTSNQIQGVIVDEENYVVVGSSITMIQLLSDYCEA
ISEMPSFSQDWNSRVVELLKTFNSRCCQLILGAGALQLVGLKTISVRNLALAGRSLELVC
RFIPMVHDEMDRVLPENRKSLLRYFKQVESEYRDHVNEIAAKLISVIAHYTTNCLGMWDV
KGVIPSPEFQQICRHMLKFHNGLVGIMPRDQIEALFRQVHENFKANLREHVTGMGITPHD
PLKYGYVTKDYMFYQQNVKNMESCRNLELESLNDIMFE
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaatggatgaccgaacagtaggtcttatatctgcaagttcatcaagagcttca
ctcaaaattcaaccggagattggttatccaagaatatgtgattattgtcagccaattatc
gagcttatgacggcttccgagtttgcacgacatattcgacaagatcatacgacaaaagaa
ggtggtagctttctttgtagatacggagaacatggagtatgtcagaaactaccactggaa
ggagtatgtgatcttgattttgaagcccacattcgtcgttgtcacacttcttctcaacca
gctggatattcaagtccaacatcttcattggtagcaagttatactgaagatagtgaagaa
acagctagtttgagaagtatacgattgacaagtgatcgagatactccaacaattgaaaag
aaaaaattcactcttcacagtttcactcaaaatctgtcagcagttcttgccgatccatca
cgatctcgaagtgacctaacaacgttcttcacacgccattggggtgacagttttgttcca
acacaaccggtaccacaatctaaaagactcgctcggctcgctgattcggctttcgatagt
tattgtcaatctgctggagagtcctatcgtcgatatcaggcaatcaaaagagctctacgt
ttgagtcacgccgatggaggagttggaattggagatgaaagacaagatgcggaagatctg
cctacgatattcatcgacccccgatttacacttggcgacagttctactttttcggatgtg
ttcacagttcctgccaatgatgatttggatgcattgaaacaaactttatcaggtagaaat
gtgattccagctacacctttagaaattgctaccaacaggaaacctggagaatttcgagac
tacgaagctcttcaaaacagattggaaatgatgcatgacgttgtggatggaagattggct
ggaaaattagttgcaaaaactgatgatttttggcaagtcgtccgatcgtacagtggcctc
caggaacaacttgccaacgcgttgcaatgtgtgatggttgttcgaaaaaacttgaaaaga
gtcgacgaactagtatgcgaccagtcaaaaaagattgtagaagttcatgaaagatacgaa
caaaaaaagaaactgctggcaaaacttcatgatatttcatgtctccgagaagcccaatca
acagttcaaatgatgttatcacaaggagattacccaaaggctatagaatgcattgaaacg
agtctagatgttctctcaaaggaattgaacggcgtcacttgtttccgacatcttgcatca
cagcttcgagagctttatacagtaattggacgtatgatgaatgaagattttgcatcatta
atacaaaaagagctcggtgtgaagccagaagctggaacgatgattcaagccgaaggagaa
ctttctgctgtcctacttggattgatgagaatgcgaaagtactcatttattgcagtttta
agagaggaaattattgaaggagtcaaaagtgtaatgcgacaagttattaaaaatcaaatt
ctaaataatggagttgatttgaacgattttgatcctagtttgacacagttgggagagcca
gtacgaagaatgaaacatgctgattttttgaaaactgtgaaagctgttatggatgaagag
ttctacttttgtaaacgattggaagctctacaagatattctactggaaactgttgaacga
gcaaatcctctacatcgacatggctctgaagatattatagttgagagaatcgaagaagca
aaagatattcacgaatctgagtctgacgatgaagttggtacaactttttccaaatcagct
agttcaggaggattctccgtcggtggttcggctttatcctctaacgcgtcagctaccact
cttctttcgattgaagtcagatcagaagcctttttacgacacgtgctcccattgatcgca
gaattcggtcatcaatgtgcgcaacaacggatttcacgattgctcattgctcgggccaaa
aatgcatcagtgacagaagctactacacctacccaactatctgaatgcattaaactcgtt
aaagaatttcaatccaagtgtgacaaggaaggatggtattccactcagaatcaaaaagtt
ggaggtcttggaagatctgttaacaagctttctatggattacattgaaaaattccatgca
gctcgaaagattcgtattggaaatatgcttgacacagaactttggaaagcgactgatgtt
tcgattgtggatcagaacattgtcgacatggcgatggaaacgggccaattaagaaacaca
aagcgaatagatgatggtccaataaaaaaatcattcaaaagaacagaaagcgctgtgaca
attgattcaacaacatctacttcaaatcaaattcaaggtgtaattgttgatgaagagaac
tatgttgttgttggatcatcaataacaatgatccagctcctttctgactactgtgaagcc
atatctgaaatgccatcattttcccaagactggaattcgcgagttgtggaattactgaaa
acatttaacagtcggtgttgtcaattgattttaggtgcaggtgccctacaattggttgga
ttaaagactatatctgttcgaaatttagcactcgcaggtcgatcactcgagttagtatgc
cgcttcattccgatggttcatgatgagatggacagagttcttcctgaaaatcgaaaaagt
ctgcttcggtacttcaagcaggttgaaagtgaataccgcgatcacgtcaacgaaattgct
gccaaattaataagtgtaatagctcattatacaacaaattgtcttggaatgtgggatgtg
aaaggagtgattccatcgccagaatttcaacaaatttgtcgccatatgctgaaattccac
aatggactggttggcatcatgccaagagatcagatcgaggcgttgttccgtcaagtacac
gaaaactttaaagccaacttacgagaacacgtcactggaatgggtatcacacctcatgac
cctttaaaatacggatatgtcacaaaagattacatgttttatcaacaaaatgtgaaaaac
atggaaagttgccgtaatttggagctcgagtcgcttaatgacattatgtttgaatag
DBGET
integrated database retrieval system
