Cellulomonas sp. H30R-01: GXP71_16230
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Entry
GXP71_16230 CDS
T06411
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
celh
Cellulomonas sp. H30R-01
Pathway
celh00040
Pentose and glucuronate interconversions
celh01100
Metabolic pathways
celh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
celh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GXP71_16230
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GXP71_16230
Enzymes [BR:
celh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
GXP71_16230
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
F5_F8_type_C
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QHT57464
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Position
complement(3630176..3631744)
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AA seq
522 aa
AA seq
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MNRPVAVRLLAAGATTALAATIGLTALAAPGAVAVTGSANGFAATNGGTTGGAGGTTVKA
TTGTAIHQALCSRSSKTTPITIQVEGTITVGNTSQVSGSGCSTASGVIELKGISNVTLEG
VGGGATFDQIGIHIRDSSNIIIQNVTVKNVKKSGSPTSNGGDAIGMESTVRNVWVDHVTL
EASGGESEGYDGLFDLKNDVENVTLSYSILRNSGRGGLIGSSETDTGSGNITFHHNLYSN
IDSRTPLLRGGVAHIYNNYYVNLHESGINSRAGAKAKVENNYFEDSKDVLGTFYTSERGT
WQTAGNILDNVTWSSTGSDTYPAGPSMASTTTVSVPYSYSLDGASCVPNLVVATAGANKG
LKTSNGSCTPTTPNPTPTQTSNPTPTQTSNPTPTSNPTSPSGTNLSIGAGADGSSKASGT
SYGNVIDGSTSTYWSPSGSTGKISVKWGSAKTISKINVVQASGGGSITSWKVLNGDNGST
LASGSGAPGVVSFSSTSLKKVTLEIVSASGTPRIAELQTFAG
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgaccagtcgcagtgcgactcctcgcagcaggagccacgacggccctggctgcc
acgatcggcctgaccgccctggccgcccccggcgcggtcgcggtcacgggttccgcgaac
ggcttcgcggcgaccaacggcggcacgaccggtggcgcgggcggcacgaccgtcaaggcc
accacggggaccgcgatccaccaggcgctgtgcagccgctccagcaagacgaccccgatc
accatccaggtcgagggcacgatcaccgtcggcaacacgtcgcaggtgtccggcagcggg
tgcagcaccgcctcgggagtcatcgagctcaagggcatcagcaacgtgacgctcgaaggc
gtgggcggcggcgccacgttcgaccagatcgggatccacatccgggactcgagcaacatc
atcatccagaacgtgacggtcaagaacgtcaagaagtcgggctcgcccacgtccaacggc
ggcgacgccatcggcatggagagcaccgtccgcaacgtctgggtcgaccacgtgacgctc
gaggcgtcgggcggcgagtccgagggctacgacggcctcttcgacctcaagaacgacgtc
gagaacgtgacgctgtcctacagcatcctgcggaactccggccgcggcggcctcatcggg
tcgagcgagaccgacaccggaagcggcaacatcacgttccaccacaacctgtactcgaac
atcgactcgcgcaccccgctcctgcgcggcggcgtggcccacatctacaacaactactac
gtcaacctgcacgagtccgggatcaactcccgcgccggtgccaaggccaaggtcgagaac
aactacttcgaggactcgaaggacgtgctcggcacgttctacacgtccgagcggggaacc
tggcagaccgccggcaacatcctcgacaacgtgacctggtcctcgaccggctccgacacc
tacccggccggccccagcatggcctcgaccaccacggtctccgtgccctactcctacagc
ctcgacggcgcgtcgtgcgtcccgaacctcgtcgtcgccaccgccggcgccaacaagggc
ctgaagacgtcgaacggctcctgcacgccgacgaccccgaacccgacgccgacgcagacc
tcgaacccgacgccgacgcagacgtcgaacccgacgcccacgtccaacccgacctcgccg
agcggcaccaacctcagcatcggcgcaggcgccgacgggtcgagcaaggcgtcgggcacg
agctacggcaacgtcatcgacggctcgaccagcacgtactggtcgccctccggctccacc
gggaagatctcggtgaagtggggctcggcgaagacgatctcgaagatcaacgtcgtccag
gcgtccggcggcggctcgatcacctcgtggaaggtcctcaacggcgacaacggctcgacc
ctcgcgtccggcagcggcgcacccggcgtcgtctcgttctcgtcgacgtcgctcaagaag
gtgaccctggagatcgtcagcgcgtcgggcacgccgcgcatcgccgagctccagacgttc
gccggctga
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