Cellvibrio sp. PSBB006: CBR65_13645
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Entry
CBR65_13645 CDS
T04891
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cell
Cellvibrio sp. PSBB006
Pathway
cell00040
Pentose and glucuronate interconversions
cell01100
Metabolic pathways
cell02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cell00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CBR65_13645
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CBR65_13645
Enzymes [BR:
cell01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CBR65_13645
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
CBM_6
CBM_35_2
CBM_35
Glucodextran_B
Cadherin-like
DUF4397
Motif
Other DBs
NCBI-ProteinID:
ARU28396
LinkDB
All DBs
Position
complement(3321885..3325475)
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AA seq
1196 aa
AA seq
DB search
MKMRVPLLLRQCALGVGGLLTAAATFAGPVGYATLNGGTTGGAGGQVVYASTGAEINQAM
CNRASDDTPLIIYVSGTINHGNTQSYSGSCDTQDDEIQFKGVSNISLIGVGDGALFDEIG
IHLRDTSNIILQNLHIRNVKKSGSPTSNGGDAIGMESDVFNIWVDHCTLEASGGEDDGYD
SLLDMKATTQYVTVSYTYYHDSGRGGLMGSSDSDDTNTFVTFHHNRYENIDSRLPLLRHG
TAHAFNNYYYGITKSGMNPRMGGEIKAEHNHFENSHNPIGTFYTDEMGYWDLKDNIFENV
TWASASDEFPAGPNPVSTTSISIPYSYQLDAVNCTKSIVLATAGAGKGLATSDGSCSVDP
GSSSSSSAPASSSSSTPVSSSSSSTPPGGGTQTLQAENAYIDRGTVDNIHNGYTGAGFVD
YENVAGSYVEWTVTGVAAGQATATFRYANGTTTNRAMSITVNGQVVNSSLAFNGTGAWAN
WAEQSMTLNLSAGTNVIRATAVTSSGGPNLDSLVLTTAAASSAPASSSSSATPVSSSSAS
SAPNEEPGELGPNIADDAGADGSSKGGGTSYGNVTDGDLSSYWSPGSSSGERVSVKGLSG
SFNTVIIRELNNATTSWRLVNNDNGQVLASGSTLGSAGVITFASVSASKINLMIDSASSA
PQIAEFEVYNATGTIPASSASSASSVTPPSSSSAPAPSSSSAPASSSSSVANSSSSAANS
SLPDYSGPLSNDCINLATNPNVNWRDTSLQSDQEIVECLAQTLGQPVGYGENARGGYDPN
GNSKLTVITKNGNTSVEQQIYDAITDNAHNWIVFDKFDFANPSEIAMYRLQCGNAAVQSH
LGATEAQCINYTQWCSSNGVSSANCVSEFFNNALNESDLPIRNIVVGSNKTLDGRMSEAF
FRFNGFAIGRDSEGQAVQTSNSVILTHLNFVGAGHTEDHGLDPDMIRATGESHDIWIHRN
NFDTTGDAAFDVKVGAYDVTISYNKLVDVKRASLHGSSDSRTINAQITTTMHHNAFITRD
GSYDSLGNTLRRIPLIRRGTSHMFNNVFVNYRKDILSVRVGASVLWEDNAFVVNRAHQEK
SSLESSLDELQANLARDVDGGSFRADRTYLWFADGACNIDGSTQRQITNSSGSVGNLTQQ
YSSRSQNSIADWRFDAGQDLVDYVSATAGRDGVLPFNSPLAGDRYYVLGLGKVPCL
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgcgagttccccttttactgcgccagtgcgcgctcggcgtaggcggcttgcta
actgccgccgctacttttgccggcccggtaggttatgcaaccttgaatggcggtactacc
ggcggtgccggtggccaggtggtttacgccagcaccggtgctgaaattaatcaggcgatg
tgtaatcgcgcctccgatgatacgccgctgattatttacgtgagcggcaccatcaaccac
ggcaacacccaaagctattcaggtagctgtgacacccaggacgatgaaattcaattcaag
ggcgtcagcaacatctccctgatcggtgtaggcgatggcgctttgtttgatgaaataggt
attcacttgcgtgatacctccaacatcatcctgcaaaacctgcacatcagaaatgtgaaa
aaatccggatcaccgacctctaacggtggcgatgccatcggtatggaaagtgatgtattt
aatatctgggttgaccactgtacgctcgaagcatccggtggagaagatgacggttacgac
tccttgctggatatgaaagcgaccacgcaatacgtaacggtttcctacacttactatcac
gattccggtcgcggtggtttgatgggttccagcgacagtgacgataccaataccttcgtc
accttccaccataatcgttacgaaaatattgattcacgtttgccactgttgcgtcatggc
accgcgcatgcgtttaacaattactattacggtattaccaagtccggtatgaacccgcgt
atgggcggtgaaattaaagccgaacataaccacttcgaaaattcacataaccccatcggt
accttctacaccgacgaaatgggttattgggatctcaaagataatatttttgaaaacgtc
acctgggcttctgcgtcagacgaatttccggcaggtcctaatccggtttccaccacgtcc
atcagcattccttattcgtatcaattagatgcggtgaattgtacaaaaagcatcgtgttg
gctacggcgggtgcaggtaaaggcctggcgacgtctgatggttcttgcagcgtagatccg
ggcagctcttcaagctcaagcgcgccagcaagttcttcttccagcacaccggtaagttct
tcctccagctctacccctccgggtggcggcacgcaaacattacaggcagaaaatgcctac
attgatcgcggtacggtggataacattcacaacggctacaccggtgccggtttcgtggat
tacgaaaacgttgctggcagttatgtcgagtggacggttaccggcgtagcggcaggccag
gcaacggctacattccgttacgcaaatggcaccaccaccaatcgcgccatgtcgatcacc
gttaacggtcaggttgttaacagcagccttgctttcaatggtaccggcgcttgggctaat
tgggctgagcaaagcatgacgttgaacttgagtgcgggtactaacgtgattcgcgcaacg
gctgttacgtcttccggtggtccgaacctggactcgttggtactgactaccgctgctgcc
agcagcgcgccagcatcctcatccagttctgccacgcctgtcagctcgtccagtgccagc
tctgcgccgaacgaagagcctggtgagttagggcctaacattgccgacgatgccggtgcc
gatggcagcagcaaaggcggtggcaccagctacggcaacgtgacggatggtgacctgagc
agctactggtctcccggttcatccagcggtgagcgtgtctctgtgaaaggtttgagcggc
agcttcaacaccgtcatcattcgtgaactcaacaacgcaacgacaagttggcgtttggtg
aataacgataatggtcaggtgttagcgtccggttctaccttaggcagtgcaggtgtcatt
acgtttgccagtgtttcggcgagcaaaataaacctgatgatcgacagcgcaagcagcgcg
ccgcagattgcagagttcgaagtgtataacgcgaccggcacgattccggcgagcagtgcg
tcttctgcttccagcgttacgccgccctccagcagcagtgcaccagcaccgtccagttca
agtgcgccggccagcagttcgtcttctgtagcaaattccagcagcagcgcggctaactct
tcactaccggattactcgggtccattgagcaacgactgtatcaacctcgccaccaacccc
aacgtgaactggcgtgatacctcgctgcaaagcgatcaggaaattgttgagtgtctggcg
caaaccctgggtcaaccggtaggttacggtgaaaatgcacgcggtggttacgatccgaat
ggcaacagcaagttgactgttatcaccaaaaacggcaacacctcggtagagcagcaaatt
tatgatgcgattaccgataacgcgcataactggatcgtattcgacaagtttgattttgcg
aatccatctgaaattgcgatgtaccgtttgcagtgtggtaacgctgctgttcaatcccat
ctgggcgcaaccgaagcacaatgtattaactacacccagtggtgttccagcaacggcgtc
tccagcgctaattgtgtaagcgaattcttcaacaacgcgttgaacgaaagcgacttgccg
attcgcaatatcgttgtcggttccaacaaaacgcttgatggtcgcatgagcgaagctttc
ttccgctttaacggttttgccattggtcgcgatagcgaaggtcaagcggttcaaacatct
aacagtgtgatcctgactcacctgaattttgtgggtgccggccacactgaagaccatggc
cttgatcccgatatgattcgcgctaccggcgagtcacacgatatctggattcatcgcaac
aacttcgacaccaccggcgatgccgcctttgatgtaaaagttggcgcttatgacgtcacc
atttcttacaacaagctggtcgatgtgaaacgcgcctccttgcatggctccagcgatagc
cggactatcaatgcgcaaatcactacaaccatgcaccacaacgcctttatcacgcgcgat
ggcagttacgattccttgggcaacaccctgcgtcgtattccgttgattcgccgtggtacc
tcacacatgttcaacaacgtctttgttaactatcgcaaagacatcctgagtgtacgtgtg
ggtgcgagtgtattgtgggaagacaacgcttttgtagttaaccgtgcgcaccaggaaaaa
agctcgctggagtcttctcttgacgaactgcaagccaacttggcacgggatgttgatggt
ggtagcttccgagccgaccgcacttatctgtggttcgccgatggtgcttgtaacatcgac
ggttctactcaacgtcagatcaccaactcatctggcagtgtaggtaatcttactcaacaa
tattcttccagatcacaaaacagtattgctgactggcgtttcgatgccggccaggatctg
gttgattacgtgagtgcgaccgcaggtcgtgatggcgtgttgcccttcaattcgcccttg
gctggtgatcgctactacgtgttgggcctcggtaaggtgccttgcctgtaa
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