Cellulomonas shaoxiangyii: E5225_06305
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Entry
E5225_06305 CDS
T05988
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
celz
Cellulomonas shaoxiangyii
Pathway
celz00040
Pentose and glucuronate interconversions
celz01100
Metabolic pathways
celz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
celz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
E5225_06305
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E5225_06305
Enzymes [BR:
celz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
E5225_06305
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
ChitinaseA_N
DUF7092
Big_13
PBP_sp32
Motif
Other DBs
NCBI-ProteinID:
QCB93221
UniProt:
A0A4P7SHQ2
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All DBs
Position
complement(1392092..1394170)
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AA seq
692 aa
AA seq
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MRAVPPSLSPARTRPAPTHARPRRRAAGAVAAVAAAGLLLPLAPAVAAASTAAPAPGAPV
RDLGREVLPAGDGWASWSGTTRPDGRVVEATGTTGGAAASAAEVYVVDTWTELRDALAGR
PGGSQTDARRSTTPRIVYVRGTLDAFETTDGTRLTCDDFAAQVTVAGTGAPFSMADYVAH
FDPAGPWGREDPSGPLEDARVAAAAVQARQTQQHVGSNVTVVGVGDDAGVVGANLRVRDA
ANVIVRNLTLSDAYDCFPQWDPGDGETGNWNSAYDNLSVWTSTSVWADHLTLDDGDHPPA
SLPTVYGRPFEVHDGLLDVTHGSDLVTVSWTHFDDHDKTSIVGSSDSRLQDRGQHRVTYH
HNRWTDVGQRAPRVRFGDVHVYNNLYEQTRPGLFSYYWGAGIESSIVAENNAVELADGVD
AARVVAEWKGTQLLETGTLVNGAPVDVVAAFNATAALPLADTARWTPADHYDPVVQPTGE
VAAAVRAGAGATLPSGTPVAAAAPDAPRLSHDNAHGTGLHDGDYTVTSTLYWGQNATVVR
FYENDVLVDAQWLDGRSPRRQTATLDVTGRANGTYTYVAEVLNPWGTARSAPLTVTVRDA
APGRPVVTAGPVRDGAVTVTTTLWWGTNATSYTLLLDGVEVDRQELVAQTPRRQRTTTTL
TDLAPGTHTVVARLTNAAGTTESEPLLLTVRG
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccgtccccccatccctctcccccgcccgtacgcgccccgcgcccacgcacgcg
cgcccccgccggcgcgccgcgggcgccgtcgccgccgtcgccgcggccgggctcctgcta
cccctggcgcccgccgtcgcggcggcgtccaccgccgcgccggcgcccggcgcccccgtg
cgcgacctcggccgcgaggtgctgcccgcgggcgacggctgggcgtcgtggtccggcacc
acccgccccgacggccgcgtcgtggaggccaccggcaccaccggcggggccgcggcgtcg
gccgccgaggtgtacgtggtcgacacctggaccgagctgcgcgacgccctcgccggccgc
cccgggggctcgcagaccgacgcccgccgcagcaccacgccccggatcgtctacgtccgt
ggcaccctcgacgccttcgagaccaccgacggcacccgtctcacctgcgacgacttcgcg
gcgcaggtgacggtcgccggcaccggcgccccgttctccatggccgactacgtcgcacac
ttcgacccggccggcccgtggggtcgcgaggacccgagcggccccctggaggacgcccgc
gtcgcggccgcggccgtgcaggcgcgccagacgcagcagcacgtcggctcgaacgtcacc
gtcgtgggggtcggggacgacgccggtgtcgtcggcgcgaacctgcgcgtccgcgacgcc
gcgaacgtcatcgtccgcaacctcacgctgtccgacgcgtacgactgcttcccccagtgg
gacccgggcgacggcgagacaggcaactggaactccgcctacgacaacctctcggtgtgg
acgtcgacgagcgtgtgggcggaccacctgaccctcgacgacggcgaccacccgccggcc
tcgctgccgaccgtgtacggccgcccgttcgaggtgcacgacggcctgctcgacgtgacc
cacggctcggacctcgtgaccgtgtcgtggacgcacttcgacgaccacgacaagacgagc
atcgtcggctcgtccgactcgcgcctgcaggaccgcggccagcaccgggtcacctaccac
cacaaccggtggaccgacgtcggccagcgcgcgccacgggtccggttcggcgacgtgcac
gtctacaacaacctgtacgagcagacccgtcccggcctcttctcgtactactggggtgcc
gggatcgagtcgagcatcgtcgccgagaacaacgccgtggagctcgcggacggcgtcgac
gccgcccgcgtcgtggcggagtggaagggcacgcagctgctcgagaccggcacgctggtg
aacggcgctcccgtggacgtggtcgccgccttcaacgccacggcggcgctgccgctcgcc
gacacggcccgctggacacccgccgaccactacgacccggtggtccagccgaccggggag
gtcgccgcggccgtccgcgcgggcgccggcgcgacgctcccgtcgggtacgcccgtcgcc
gcggcggccccggacgccccgcggctgtcccacgacaacgcgcacggcaccggcctgcac
gacggcgactacaccgtcacgtccaccctgtactgggggcagaacgcgacggtcgtgcgg
ttctacgagaacgacgtgctcgtcgacgcgcagtggctggacgggcgctccccacgccgg
cagaccgccactctcgacgtcacgggacgggcgaacggcacgtacacctacgtggccgag
gtgctcaacccgtgggggacggcgcgctccgccccgctgacggtcacggtccgcgacgcc
gcgcccggccgaccggtcgtcacggcagggcccgtgcgggacggcgccgtcaccgtgacc
accaccctctggtggggcaccaacgcgacctcgtacacgctgctcctcgacggcgtcgag
gtcgaccggcaggagctcgtggcgcagacaccacgccggcagcgcaccaccaccacgctg
acggacctggccccgggcacgcacaccgtggtcgcacggctgaccaacgccgccggcacg
acggagagcgagccgctgctgctgaccgtgcggggctga
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