Cyanobacterium endosymbiont of Epithemia turgida: ETSB_0404
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Entry
ETSB_0404 CDS
T03622
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
ceo
Cyanobacterium endosymbiont of Epithemia turgida
Brite
KEGG Orthology (KO) [BR:
ceo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ceo03016
]
ETSB_0404 (gidA)
03036 Chromosome and associated proteins [BR:
ceo03036
]
ETSB_0404 (gidA)
Transfer RNA biogenesis [BR:
ceo03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
ETSB_0404 (gidA)
Prokaryotic type
ETSB_0404 (gidA)
Chromosome and associated proteins [BR:
ceo03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
ETSB_0404 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
Pyr_redox_2
FAD_oxidored
DAO
FAD_binding_2
HI0933_like
ThiF
Pyr_redox
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
BAP17263
LinkDB
All DBs
Position
complement(643203..645128)
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AA seq
641 aa
AA seq
DB search
MTIDFQDTFDIIIVGAGHAGCEAALSSARRGCRTLMLTINLDKIAWQPCNPAVGGPAKSQ
LTHEVDALGGEIGKMADRTYLQKRVLNSSRGPAVWALRAQTDKREYSALMKKIVENQDNL
TIREGMVTDLVLGTNDQVIGVETYFGTCFGAQAVVLTTGTFLRGRIWIGNKSMEAGRAGE
FAAVGLTETLNKLGFETGRLKTGTPARVDKRSVDYRNLEIQPPDDEVGWFSFDPEVWIKR
EQMNCYLTRTTAETHQIINNNLHLSPIYGGFIDSKGPRYCPSIEDKIVRFADKESHQIFI
EPEGRDIPELYIQGFSTGLPENIQLAMLRTLPGLEKCEMLRPAYAVEYDYLPATQCYPTL
MTKKIGGLFCAGQVNGTTGYEEAAAQGIVAGINAVQLVKNKEMIVFPREESYLGTLIDDL
CTKDLREPYRMLTSRSEYRLILRSDNADQRLTPLGRKIGLIDDRRWQLFKTKQDSISVEK
KRLHEIRIKETDKIGIIIATETQQKIKGSINLADLLRRPGFHYADLDRYRLGNSQLSLVE
KQGAEIDIKYSGYLKRQQNQIDQISRYSNRKLPENLDYMKIETLAMESREKLTQVKPLTL
GQASRIGGVNPADINALLVYLELHLPPKEYPLTIIYNQETP
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgatttccaagatacttttgatatcattattgttggcgcaggccatgcagga
tgtgaggcagctttaagcagtgcacgtcgtggatgtcgcaccctgatgttaaccattaat
ctagataaaattgcttggcaaccttgtaaccccgcagtagggggaccagcgaagtctcaa
cttacccatgaggtagacgccttagggggagaaatcggcaaaatggcagaccggacctat
ttgcaaaaacgagttcttaacagctcaagaggtcctgctgtgtgggcactacgtgcccag
accgataaacgggagtattcagccttaatgaaaaaaattgttgaaaatcaagataattta
acaattcgtgaaggtatggtgacggatttagtcctagggacaaatgatcaagtaatcggc
gttgaaacctattttgggacttgcttcggcgcacaagcagttgttttaactaccggaacc
tttttaaggggtcgtatttggatcggcaataaatcgatggaagcaggcagagccggagaa
tttgcagcggtaggacttaccgaaactttgaataaattggggtttgaaactggaagactt
aaaactggaacccctgctagagtagataaacgatcagtagactatcgtaatttagaaatt
caaccccctgacgatgaagtaggttggtttagttttgatcctgaggtttggattaaacga
gaacagatgaattgctatttaacccgaaccacagccgaaacccatcagataattaataat
aatttacacctatctccaatctacggcgggtttatcgactctaaaggtcctcgttactgt
ccttctattgaagataaaattgttcggtttgcagataaagagagtcatcaaattttcatt
gaacccgaaggacgagatattcctgagctttatatccaaggattttctacaggacttcct
gaaaatattcaattagcgatgttaagaacccttccagggttagaaaaatgcgaaatgtta
cgtcccgcctacgcggtggaatatgattatcttcccgccacccaatgttatccgaccctg
atgactaagaaaattggaggtttattttgcgccggtcaagtcaatggaacaacaggatat
gaagaagcagccgcccaaggcatcgttgcaggaattaatgcagttcagctagttaaaaat
aaagagatgattgttttcccacgagaagaaagttatctgggaactttaattgatgatttg
tgtaccaaagatctacgagaaccttatcgaatgctaacctctaggtcagaatatcgttta
attttaaggtcagataatgccgatcaacggttaacaccattaggtcgaaaaattgggtta
attgatgatcgtcgctggcaactttttaaaacaaaacaagatagtatttccgtagaaaaa
aaacgtcttcacgaaattagaattaaagaaacagataagataggaattatcattgcaaca
gaaactcaacaaaagattaagggatcaattaatttagcagatttattacgccgtcctggg
tttcattatgctgatttagatcgctatagattaggaaattctcaacttagtttagtagaa
aaacaaggggcagaaatagatattaaatactcgggttatttgaaacgccaacaaaatcaa
attgaccaaattagtcgttatagcaatcgtaaattaccagaaaatttagactatatgaaa
attgaaacattggcaatggaatctagagaaaaattaactcaagttaaacccttaaccctg
gggcaagcgtcgcgtattgggggagttaacccggctgatattaacgctttgttagtgtat
ttggaattgcatttgcccccaaaagagtatcccctcacaataatttataatcaagaaact
ccataa
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