Coxiella-like endosymbiont of Amblyomma americanum: B1F76_01570
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Entry
B1F76_01570 CDS
T07659
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ceq
Coxiella-like endosymbiont of Amblyomma americanum
Pathway
ceq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ceq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B1F76_01570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ceq03021
]
B1F76_01570
03400 DNA repair and recombination proteins [BR:
ceq03400
]
B1F76_01570
Enzymes [BR:
ceq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B1F76_01570
Transcription machinery [BR:
ceq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B1F76_01570
DNA repair and recombination proteins [BR:
ceq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B1F76_01570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
AUJ59038
UniProt:
A0A3S6R1D8
LinkDB
All DBs
Position
334797..338930
Genome browser
AA seq
1377 aa
AA seq
DB search
MTQSNVENVEDENTTVVSYAEKLRARINLGKREVEVLKTPYLLATQIEFYRAFLQKDVAP
EYRKNTGLHAAFKSVFPISSYSGYAELVYVSYSLGEGPIFDVEECKLRGLTYAAPLKVNM
RLLIYDKNTFTGKKVIRDIKEQEVYMGEIPLMTETGSLIINGTERVVVSQLHRSPGVFFE
HDKGKTHSSGKLLYSARIIPYRGSWLDFEFDYKDCLFMRIDRRRKLPATVILKALDYSDE
EILDMFYKANVFHLNKTNVVLELIPKRLRGELATMVIKDKKGEIIVKPGRRISARHVRLI
EQSGVNKLELLDEYLYGKVISKAICNKETGLMIARANEVITEDLLKKLRTQNVDLLHTLY
INEIEYGPYISDTLRLDNTTNQLEALVEIYHIMRPGEPPTKEAAESLFESLFFSPERYDL
SAVGRMKFNRRVGRRELTGPWTLSKKDIMDVLRVLVEIRDGKGDVDDIDHLGNRRIRSVG
EMAENQFRIGLVRVERAVKDRLSLADIETLVPQDLVNAKPVSAAIKEFFGSSQLSQFMDQ
NNPLSEITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLAI
FARANEYGFLETPYRKVTGGIVTNKIKYLSAIEEGDYYIAQANTNVDQDGRMTDELISCR
YKGEFTLTVPEKVHYIDVSPRQIVSVAAALIPFLEHDDANRALMGSNMQRQAVPTIRPEA
PLVGTGMERTVAIDSGVTVVAKRSGIVDFVDASRIVIRTNAGEVDVNDIGVDIYNLTKFA
RSNQNTCINQHPIVEVGDFIRKGDVLADGPSTDIGELALGQNLLVAFMPWNGYNFEDSIL
ISERLVEEDRFTTIHIQEFTCVARDTKLGPEEVTADIPNIGENALAKLDESGIVYIGAEV
NPGDILIGKVTPKSETQLTPEEKLLRAIFGEKASDVKDTSLRVTPGVTGTVIDVRIFTRE
GVKKDKRALEIEKSELSKIEKDLNDRFRIREDALFENLERLLINQTLLSVEALKLKQDTR
INRAYLKKLPRQQWFDIRLHDNNVMQQLQVVYEHYKELHKVRDQKLKDFHQKLTQGGDLA
PGVIKIVKVYLAVKRRIQPGDKMAGRHGNKGVISTIIPVEDMPYLEDGTPVDIVLNPLGV
PSRMNIGQVLETHLGWAAKSLGVKIGELIDQGRDVKQLRKTLKSIYDFSKAQKFNMEILN
DKEVMTLAKNLRRGVPMSSPVFDGATEEEIKCLLKMTNLPVSGQTDLYDGRTGQKFDRAI
TVGYMYMLKLNHLVDDKIHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAY
TLQEMLTVKSDDVTGRTRMYKNIVDGDHRMSAGMPESFNVLIKEIRSLAIDINLEND
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaatcaaatgttgaaaatgttgaagatgaaaatacaaccgtagtttcttatgct
gaaaaactgcgtgcacgaatcaacttaggcaaacgcgaagttgaagtattaaaaactcct
tatctattagcaacacaaatagaattttatcgtgccttcttacaaaaagatgttgctcct
gaatatcgaaaaaatactggccttcatgctgcatttaaatctgtttttcctatctctagt
tattctggttatgcggaattagtttatgttagttatagtttaggcgaaggacctattttt
gatgtagaagagtgtaaattacgaggtttaacctatgcagcacctttaaaagtgaatatg
cgattactgatctatgacaaaaatacattcacgggaaaaaaagtcattagggatatcaaa
gaacaagaagtgtatatgggtgagattccattaatgacggagacaggaagtctcataata
aatggtactgagcgtgtggttgtatctcaattgcatcgttctccaggggtgttttttgaa
cacgataaaggtaaaactcattcttctggaaaattgttatactcagcgcgtattattccc
tatcgcggttcgtggttggattttgaatttgactacaaagactgcttatttatgagaata
gatcgacgtcgaaagttgccagcaacagtgattttaaaagcgttagattacagtgatgaa
gagattcttgatatgttctataaagctaacgttttccatttgaataagacaaatgtcgtt
ttagaattaatacctaagcggttacgaggcgaattggcaacaatggtgataaaagataaa
aaaggggaaataattgttaagcccggtaggcgaatttcagctcgacatgttcgattgatt
gaacagtctggggtcaataaattagaattgcttgatgagtatttgtatggaaaagttatt
agtaaagctatttgtaataaagaaactggattgatgattgccagagcaaatgaagttatt
acagaagatttattaaaaaaattacggactcaaaatgttgacttactacatacattgtac
atcaatgaaattgaatacggaccttatatttctgatactttacgattggataatacaaca
aatcaactagaagccttagtcgaaatttatcatattatgcgtcccggcgaaccaccgaca
aaagaagctgctgaaagtttatttgagagtttattcttttcgccagaacgttatgattta
tccgcggtaggaagaatgaaattcaaccgacgagtcggacgaagagaattgacaggacca
tggactttatctaaaaaagatattatggatgtattgcgggtccttgttgagattcgagat
gggaaaggcgatgtagatgatattgaccatttgggaaatcgtcgtattcgtagtgtgggt
gagatggctgagaatcaatttcgaattggtttagtacgtgttgaaagagcagtaaaagat
agattaagtttagcagatattgaaacgttagttcctcaagatttagtcaatgcaaaacct
gtatcggcggcgattaaggaattctttggttcgagtcaattatcgcaatttatggaccaa
aataacccattgtctgagataacacataaacgtcggatatctgctttaggtccaggaggg
ctaaccagagaaagagcgggtttcgaagtgcgggatgtgcatcctacccactatgggcgt
gtttgtcctatagaaactccagaagggccaaatattggtttaattaactcattagcaata
tttgctcgggcaaacgaatacggttttttagaaacaccttatcgcaaagtgactggcgga
atagtcactaataaaattaaatatttgtcagctatcgaggaaggcgattactatattgca
caggcaaatactaacgttgatcaagatggtcgtatgacagatgaattaatttcgtgtcgc
tataaaggtgaatttactcttactgtaccagagaaagtacactatatagacgtttcgccg
agacaaatcgtttctgttgccgctgccttaattccttttttagaacatgatgatgccaat
agggcgttaatgggttctaatatgcaacgacaggcggtgcctacaattagaccagaggca
cctttggtgggaactggaatggaacgaactgtagctatagattctggggtaacggtggtt
gctaagcgcagtgggatcgtggatttcgttgacgcttcacgcattgtaattcgaacaaat
gcaggggaggtggatgtaaatgatattggagttgatatttataatttaactaaatttgct
cgatctaatcaaaacacttgtattaatcaacatcctattgtggaagtaggggattttata
cgaaaaggggatgtattggctgatggaccgtctactgatattggtgaattagcgctgggg
cagaatttactagtggcttttatgccttggaatggttacaattttgaagattccattttg
atttctgaacgattagtagaagaagatcgatttactacaattcatattcaggaatttact
tgtgtcgctcgcgatactaaattaggcccagaagaagttacagcagatattccaaatatt
ggagaaaatgcgctagcaaaactggatgaatctggcattgtgtatattggagctgaagtc
aatccgggtgatattttaataggtaaagtaacccctaaaagcgaaactcaacttacgcca
gaggaaaaattgctgagagcaatttttggtgaaaaagcttcggatgtaaaagatacgtct
ttgcgcgttactcctggagtcactggaactgttattgatgttcgtatttttactcgtgaa
ggtgtaaaaaaagataagcgtgcattggagattgaaaagtcagagctctcaaaaatagaa
aaagatttaaacgatcgatttcgtatccgagaagatgctttgtttgaaaatttagaaagg
ctgcttattaatcaaacattgttatctgtggaagcacttaaattaaagcaagataccagg
attaatagagcttatttgaaaaaattaccaagacagcaatggtttgacatccgattacac
gacaacaacgtaatgcaacagcttcaggttgtgtacgaacactacaaggaattgcacaaa
gtacgagatcaaaaacttaaagattttcatcaaaaattgacccaaggtggagatttagcg
ccgggtgttattaaaatagtaaaagtttacttggcggtgaagcgccgtattcaaccaggc
gacaaaatggcggggcgtcatggaaataaaggggtgatttccactattattccggttgaa
gatatgccttatctagaagatggaacgccagtagatattgtgcttaatcctttaggggtt
ccttctcggatgaacattggtcaggtattagaaacccatttaggatgggctgcgaaaagc
ttgggtgttaaaataggtgaattgattgaccaaggtcgtgatgtaaaacaattacgtaaa
actcttaagtctatttatgatttcagtaaagctcagaaatttaatatggagattttaaat
gataaagaagttatgactctagcaaaaaatttaagaagaggcgttcccatgtcatcgcct
gtatttgatggcgctacagaagaagaaataaaatgtttgctaaaaatgacgaatctccct
gtttctgggcaaactgatttatatgatggacgcactgggcaaaaatttgatcgagcaatc
actgtaggttatatgtatatgctaaagcttaaccatttagttgatgataagatacatgct
cgttctacaggttcttatagtcttgttactcagcaacctctaggaggtaaggcccaattt
ggaggacaacgatttggagaaatggaagtgtgggcattagaagcttatggtgcagcttat
actcttcaagagatgttaactgtgaaatccgatgatgtgactgggcgcactcgtatgtat
aaaaatattgttgatggtgaccatcgaatgagcgctggtatgccggaatcttttaacgta
ctaataaaagaaattcgttcattagctattgatattaatttagaaaacgattaa
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