Chanodichthys erythropterus (predatory carp): 137002155
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Entry
137002155 CDS
T10334
Symbol
col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04510
Focal adhesion
cery04512
ECM-receptor interaction
cery04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137002155 (col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137002155 (col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
137002155 (col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cery00535
]
137002155 (col9a2)
Proteoglycans [BR:
cery00535
]
Extracellular matrix (ECM) proteoglycans
Others
137002155 (col9a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
137002155
NCBI-ProteinID:
XP_067217763
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Position
15:complement(22502785..22523109)
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AA seq
688 aa
AA seq
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MARFFRSLVLLQALCLALSQVTGPPGPQGPPGPPGPAGTPGADGIDGEKGPPGPPGPLGQ
KGEAGEPGPDGAPGEDGIDGLIGAKGERGPRGNPGPKGQPGPGGRSGPPGAGLPGLPGAP
GPIGLPGQIGPIGPKGVTGSPGPPGLPGPPGKPGPPGKFLGVEEGSADFQCPTNCPPGPK
GPQGIQGVKGHKGRAGVLGDPGSIGRLGTKGDVGISGEQGIPGPPGPQGLRGYPGMVGPK
GEMGPQGYKGISGPIGIPGRPGEEGPQGPPGEPGDKGDMGERGIRGPQGVVGKKGENGLP
GIDGKDGTPGIPGIKGASGQSGRPGAPGHQGDAGLPGMPGAKGELGVKGEPGPRGLMGMQ
GPPGPQGEPGPPGEAGMEGVPGPKGDRGERGPVGPPGIVGLPGSKGERGPMGVPGAQGLT
GTKGDKGFQGKVGSKGDVGDPGVEGLAGEKGEKGQSGEPGPKGQQGVTGDPGHNGPTGDP
GKPGDQGPSGLPGPRGLFGERGVPGMPGILGPAGRDATDQHIIDVVLKMLQERLAAVAVS
AKRAVLGGAGVMGPPGPPGPPGPPGPQGPHGLTGGRGIPGIIGAPGQIGNTGLKGKRGAK
GERGDPGRPHPGQPGPPGLPGPPGLDGVARDGRPGERGPQGAAGEAGRPGKAGSPGLPGF
CEAAACLAASAYTSPRLQEAGTVKGPST
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggctagattcttcagaagcttggtcctgttgcaggcactctgcttggccttatcgcaa
gtgaccggtccacccggaccccagggccctcctggtccccctggtcccgctggaactccc
ggtgccgacggcattgatggtgagaagggtcctcctggccctcctggaccactaggtcaa
aagggagaggcaggagaacctggtcctgatggagctccaggagaggatggcattgatggt
ttgattggtgctaaaggtgagagaggccctcgtggtaatcctggaccaaagggtcagcca
gggcctggtggacgatcaggaccacctggagccggactgcctggacttcctggagcacca
ggccccattggacttcctggacaaattgggcctattgggccaaagggtgtcacgggaagt
cccggacctccaggattacccggacctccaggcaagcctggtccaccaggaaagtttttg
ggtgtagaggaagggagtgctgactttcagtgtccaaccaactgtccacctgggccgaag
ggtcctcagggcatacagggagtgaagggacataaaggtcgtgctggcgttttgggagat
ccaggaagcatcggaagattgggtacaaagggtgatgtcggcatctctggtgaacaggga
ataccaggccctccaggcccacagggtctgagagggtatccaggaatggtggggcccaaa
ggagagatgggaccacagggctacaaaggcatttcaggaccaatcggcatccctggacgc
cctggtgaagagggaccccaaggaccacctggagagcctggtgacaaaggtgacatggga
gaacgtggcatacgagggcctcagggagtggtcggaaaaaagggagagaatggtcttcca
ggaattgatggaaaagatggtactcctggcatcccaggaataaagggcgcttcaggacaa
agtggaagacctggagctcctggtcaccagggtgatgctggtttgcctggtatgcctgga
gccaagggtgaactgggagttaagggtgagccgggacctcgaggtttgatgggaatgcaa
ggccctccaggacctcaaggagagcctggtcctccaggtgaagctggcatggagggagtc
ccagggccaaagggtgacaggggtgaaagaggaccagttgggcctcctggtattgttggc
ctgcctggaagtaagggagagagggggcccatgggcgtcccaggtgctcagggtctaact
ggaacgaagggtgacaagggatttcaaggcaaagtgggatcaaagggagacgttggtgat
cctggtgtagagggattggctggggagaaaggagagaagggacaatctggggagcctggc
cctaagggacagcaaggtgtgactggtgatccagggcacaacggccccaccggagatccc
ggtaaaccaggagaccagggtccctcaggcttacctggtcctcgtggcctgtttggagaa
agaggagttccagggatgccaggaatattaggaccagctggtcgtgatgctaccgatcaa
cacatcattgacgtggtcctgaagatgcttcaagaaaggttagcagctgtcgcagtgagc
gctaagagagcggtgcttggcggagcaggcgtgatgggacctccaggtcctccaggacca
ccgggacctccaggacctcagggtcctcatggactgacaggcggccgtggcattcctggc
attatcggggccccaggccaaataggaaacactggtcttaaagggaaaaggggtgcaaag
ggagagagaggtgatcctggacgaccacaccctggccaaccgggaccacctggactgcca
ggtcctccaggtcttgacggcgtggcacgcgacggtaggccaggagagcgaggaccacag
ggtgcagctggtgaggcgggccgccctggaaaagctggttcccctggtcttcctggattt
tgtgaagcagctgcatgtttggcagcctcagcctacacttctcccagactacaagaggca
ggaacagtgaagggcccatccacttaa
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