Chanodichthys erythropterus (predatory carp): 137011719
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Entry
137011719 CDS
T10334
Symbol
scn1lab
Name
(RefSeq) sodium channel, voltage-gated, type I like, alpha b
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cery04040
]
137011719 (scn1lab)
Ion channels [BR:
cery04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
137011719 (scn1lab)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
SieB
RhlB
IQ
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
137011719
NCBI-ProteinID:
XP_067230908
LinkDB
All DBs
Position
21:5509415..5551733
Genome browser
AA seq
2000 aa
AA seq
DB search
MAAQLLVPPGPDSFRPFVPESLAAIERRIAEEAAQRPKGERRPDDDDENGPKPNSDLEAG
KSLPFIYGDLPPNMVSVPLEDLDTYYSNQKTFIVLNRGKAIFRFNATPALYILSPFNPLR
RISIRVLVHSLFSFVIMCTILTNCAFMTLSNPPDWAKNVEYTFTGIYTFESLIKILARGF
CVGKFTFLRDPWNWLDFSVILMAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVG
ALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVKMPEVNVTENHTTTLNYSIG
SELQNSTFNWTVYISDEKNYYYLPGRRDALLCGNSSDAGQCPEGFACIKAGRNPDYGYTS
FDTFSWAFLSLFRLMTQDFWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLVNLILAVVAM
AYDEQNQATIEEAQQKEEEFQAMLEQLKRQQEEAQVAAAAATESGEYSGRGGLSEESSSG
GSRLSSKSAKERRNRRKKRKQREEEEKADQEKFHKSASEDSIRRSGFRLSIDANRLSYEK
KCSTPNQSLLSIRGSLFSPRRNSRASLFSFRGRARDFGSENDFADDEHSTFEDSDSRRGS
LFVPRCIERRSSTVSHCSLAPRIMLPANGKMHCTVDCNGVVSLVGGTSVPTSPIGRLLPE
GTTTESDVRKKRSGSHQPSDYLDETVARKRALSVASILTNTMEELEESRQKCPPCWYKFA
NSFLIWDCYPAWLKVKEIVNMIVMDPFVDLAITICIVLNTLFMAMEHYPMTPGFNHVLSV
GNLVFTGIFTAEMCLKVIALDPYYYFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFR
LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYRECVCK
ISEDCVLPRWHMDDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLIVFMMVMVIGNLV
VLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIHKGIALVKSTLRQFLQSLCLAGS
KPRALDEEKPLDDLHSDGKENCLSNHAPVAVDLTKDYLKDGCVSPGNGVEGHVKYGIEEG
DYMSFIHNPSLTVTVPIAVGESDFENLNTEDFSSDSSDVEGSKEKLPVDAVLSSSEGSTV
DIRPPGEGAESVELEPEESLDPEACFTEGCVMRFQCCQVDVEKGKWKSWWNLRKTCFIIV
EHNWFESFIIFMILLSSGALAFEDIYIEQRKTIKTVLEYADKVFTYVFILEMLLKWVAYG
FAKYFTNAWCWLDFLIVDVSLVSLVANALGYSELSAIKSLRTLRALRPLRALSRFEGMRV
VVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYHCINITNEEIIPITVVNNKSD
CLALINNNDTARWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRDVELQPDYEC
NIYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLG
SKKPQKPIPRPTNKFQGIVFDLITKQAFDIVIMILICLNMVTMMVETDDQTDDMDNILYW
INLVFIVLFTGECVLKMISLRHYYFTIGWNVFDFVVVILSIVGMFLSEMIEKYFVSPTLF
RVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYV
KKEAGIDDMFNFETFGNSMLCLFQITTSAGWDGLLAPILNKQDPDCDSETEHPGSLYRGN
CGNPSVGIFFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWERF
DPNATQFVEYNKLSDFADALDPPLRIAKPNKIQLIAMDLPMVSGDRIHCLDILFAFTLRV
LGEEGEMDALRGQMEDRFMASNPSKVSYEPITTTLRRKQEEMSASVIQRAFRRYRIRQTV
KKASKAYRQQLQDGVVHIPEKEVLVIGKFQENSASDKTDMTPSSASPPSYNSVAKSEKDK
YEKERREKEDKAKDARDRKK
NT seq
6003 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcagctgctcgttccacccggacctgacagcttccggcccttcgtgcccgag
tctctcgctgctatcgagcgccgcatcgcagaggaggcggcccaacggcccaaaggcgag
agacggcctgatgatgatgacgaaaacgggcccaaacccaacagcgatttggaggcggga
aaatccctgccctttatctatggagaccttccacccaacatggtgtccgtcccgctggag
gatctggacacctactacagcaaccaaaaaacctttatagtattgaatcgtgggaaggct
atattccgctttaatgctacgccggccttgtatattttgagccctttcaatccattgagg
agaatctccatcagggtcctggtgcattcgctgttcagttttgtgatcatgtgcacaatc
ttgaccaactgcgccttcatgaccctcagcaatcccccggactgggccaagaacgtggag
tacacgttcacagggatctacaccttcgagtccctgattaagatcctggcacggggcttc
tgcgtggggaagttcactttcctgcgagacccctggaactggctggatttcagtgtcatt
ctgatggcgtatgtaactgagtttgtaaacctaggcaatgtgtcagctctccgcacattc
agagtgctcagagctttgaaaactatctcagtcatcccagggctgaagaccatcgttgga
gctctgatccagtccgtgaagaagctgtcagacgtgatgatcctgacggtgttctgtctg
agtgtgtttgctctgatcggactgcagctcttcatgggaaacctgcggcagaagtgtgtg
aagatgccggaagtcaatgtcactgaaaaccacactaccacgctgaactatagtatcggc
tcagagctgcagaactccacctttaactggacagtgtacattagtgatgagaaaaattat
tattacctcccaggccgcagagatgctttgctatgtggaaattcaagcgatgcagggcag
tgcccagagggcttcgcatgtataaaagcagggcgtaatcctgactacggctacacaagc
tttgacacgttcagctgggccttcctctctctcttccgactcatgacacaagacttctgg
gaaaacctctaccagcagacactgcgtgcagctggaaagccctatatgatcttctttgtt
cttgtgatctttctgggctccttttatctggtgaatctcatcctggctgtggtggccatg
gcatatgatgagcagaaccaggccaccatagaagaggcccaacagaaagaagaagagttt
caagccatgctggaacagctgaagagacaacaagaagaggcacaggttgccgcggcagca
gcaacagagagtggggagtacagcgggagggggggcttgtcagaggaaagctcctccggg
gggtccagactcagctccaagagcgctaaagagagaaggaacaggaggaagaaaagaaaa
caaagggaagaagaagagaaagccgatcaggagaagttccataagtccgcctcagaggac
agtatcagacgttctggatttcgattatccatagatgccaaccgcctctcatatgagaag
aaatgttccactccaaatcagtctcttctcagcattcgtggatctctcttctccccgagg
aggaacagtcgtgcgagtcttttcagttttcgtggtagagcacgagactttggctcagag
aatgattttgcagacgatgagcacagcacttttgaagatagcgacagtcgccgcggatcg
ctcttcgtacctcgttgtattgagagacgaagttccactgtcagccactgcagccttgcc
cccaggattatgctcccagccaatgggaaaatgcattgcacagttgattgcaatggagtg
gtgtcactggtgggtgggacatctgtgccaacttcaccaatcggacgtttgttaccagag
ggcacaaccactgagtctgatgtacgtaagaaacgttcaggatcacaccagccatctgat
tatctggacgaaacagtagccagaaaaagagctctgagtgtggccagcattctgacaaat
actatggaagaactcgaggaatcacggcagaagtgccctccttgttggtacaaatttgcc
aatagcttcctgatctgggactgctatccagcctggctgaaggtgaaggagattgtgaac
atgatcgtgatggatccgtttgttgacctggccataaccatctgcattgttctcaacacc
ctcttcatggctatggaacactaccccatgacaccaggattcaaccatgtgctgtcagtt
gggaacctggtattcacaggaatcttcacagcagagatgtgtctgaaagtaattgctctg
gacccatattactacttccaagaaggctggaatatctttgacggcatcattgtaagcctg
agtcttatggaactgggcctggccaatgttgagggactttcggtgttgcgctcctttaga
ttgttaagagtctttaagctggcaaagtcttggcccaccctgaacatgctgataaagatt
attggtaactcagttggtgctttgggaaatctaaccctcgtcctggccatcattgtcttc
atattcgctgtggttggaatgcagctgtttggaaagagttaccgagagtgcgtctgcaag
atttcggaggactgtgtgttgccgcggtggcacatggacgatttcttccactccttcctg
attgtattccgagtgctttgtggcgaatggatcgaaaccatgtgggactgcatggaagtg
gcgggacagtcaatgtgtctcatcgtcttcatgatggtcatggtcattgggaatctggtg
gtgttgaaccttttcctggccttgctgttgagctctttcagtgccgataatctcgccgcc
acagatgacgacagcgaaatgaacaacctgcagatcgccgtgggccgaatacataaaggt
attgcactggtcaagtcaactttgcgccagttcctccaaagcctctgcctggccggctcc
aaaccacgcgcactagatgaagagaaaccccttgacgacctacacagcgacggcaaggag
aactgcttgtccaatcacgctccagtggccgtcgacctcactaaagactatctgaaggat
ggttgcgtttcccctggtaacggggtggaaggtcacgtaaagtatggaattgaggaaggc
gactacatgtcgttcatacacaatcccagcctcactgttacagtaccgattgcggtggga
gagtcggactttgaaaatctgaacacggaagatttcagtagcgactcgtctgacgtcgag
ggcagtaaagagaagctgcctgttgatgcggttctcagttcctcagaggggagcacagtc
gatatacgacccccaggagagggggcggagtccgtcgagttggagccggaagagtccctg
gacccagaggcctgctttacagaaggctgtgtgatgaggtttcagtgctgtcaggtcgat
gtggagaagggaaaatggaagagttggtggaatctcaggaaaacctgcttcatcattgta
gagcacaactggtttgagtcctttatcatcttcatgattttactcagcagtggagcattg
gcttttgaggacatttacatcgagcagcgcaagactataaagacggtgttggaatatgca
gataaagtcttcacatacgtctttattttggagatgcttctgaagtgggttgcttacggc
ttcgccaaatacttcaccaatgcttggtgctggcttgacttcctgattgttgatgtgtcg
ttggtgagtttggtggcaaatgctcttggttactctgaactaagtgccattaagtccctg
agaactctgcgtgctcttagacctttgagagcattgtcacgcttcgagggaatgagggtt
gtagtgaatgccctgctgggagccataccttccatcatgaatgtgctgctggtgtgtctg
atcttctggctgatcttcagcatcatgggggtgaacctcttcgctgggaaatactaccat
tgcattaatatcaccaacgaagaaattattcccatcactgtggtcaataacaagtccgat
tgcctagccctgattaataacaatgatacggcacgctggaaaaacgtgaaaattaatttc
gataacgtgggagccggatacctggcactactgcaagtggccacgtttaaaggatggatg
gacatcatgtacgcagctgtggattctcgtgatgtggagctgcagcctgactacgaatgt
aacatttacatgtacctgtacttcgtcatcttcattatcttcggctccttctttaccctc
aacctcttcattggtgtcatcatcgataacttcaatcagcagaagaaaaagcttggaggt
caggatatattcatgacagaagaacagaagaaatattacaatgccatgaagaaactggga
tctaagaagcctcaaaagccaattcccaggcctacgaacaagtttcaaggcattgtcttt
gacttaatcaccaaacaagccttcgatattgtcattatgatcctgatctgcttgaacatg
gtgaccatgatggtggaaactgatgaccagacagatgatatggacaatattttgtactgg
ataaacctggttttcatcgtcctcttcactggagaatgtgtgctcaagatgatctccctc
cggcactactacttcaccattggctggaatgtgtttgacttcgtagtggtgattctgtct
attgttggcatgttcctctctgagatgattgagaaatattttgtatcgccaaccttattc
cgagtcatccgacttgccagaatcggtcgcattcttcgtctcatcaaaggcgccaaaggc
attcgtacgctcctgtttgccttgatgatgtcacttcctgccttgttcaatattggcctc
cttctcttcctagtcatgtttatctatgccatctttggaatgtccaactttgcctatgtg
aagaaagaggcggggatcgatgacatgttcaactttgagacattcgggaactcgatgctt
tgcctgttccagatcaccacttctgcaggatgggacggcctcttggcgcccatcctgaac
aagcaagatccagactgcgacagcgaaacagagcacccgggcagcttgtaccgcggcaac
tgcggaaacccctcggtcggcatcttcttcttcgtgagctacatcatcatctgcttcctg
attgtggtgaacatgtacatcgctgtgatcttggagaacttcagcgtagccaccgaggag
agtgccgaaccgctcagcgaggatgactttgaaatgttctacgaagtctgggagcgattc
gaccccaatgctacgcagttcgtggagtacaacaagctttctgactttgcagatgctctg
gatcctccgttacgcatcgccaagccaaacaagatccagctcattgccatggacctgccc
atggtcagtggggatcgcatccactgcctggacatcctgtttgcctttactctgagggta
ctgggagaggagggtgagatggatgccctgaggggacaaatggaggatcgtttcatggcc
tccaatccctccaaagtctcctacgagcccatcacgacaaccctccggaggaaacaggag
gagatgtcggcctccgtcattcaaagggccttccgacggtaccgcataaggcaaacggta
aagaaggcctctaaagcgtatcggcaacagctgcaagacggggtcgtgcatatcccggag
aaagaggtgcttgtcattggaaagtttcaagagaactctgcgtcggacaaaacggatatg
actccctcttctgcctctccgccatcttataacagtgtggccaagtcagagaaagacaaa
tatgaaaaagagaggagagagaaggaggacaaagcaaaagatgcaagggacagaaaaaaa
tga
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