Chanodichthys erythropterus (predatory carp): 137027816
Help
Entry
137027816 CDS
T10334
Symbol
capn1b
Name
(RefSeq) calpain-1 catalytic subunit b
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04141
Protein processing in endoplasmic reticulum
cery04210
Apoptosis
cery04217
Necroptosis
cery04218
Cellular senescence
cery04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
137027816 (capn1b)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
137027816 (capn1b)
04217 Necroptosis
137027816 (capn1b)
04218 Cellular senescence
137027816 (capn1b)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
137027816 (capn1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cery01002
]
137027816 (capn1b)
Enzymes [BR:
cery01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
137027816 (capn1b)
Peptidases and inhibitors [BR:
cery01002
]
Cysteine peptidases
Family C2: calpain family
137027816 (capn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
137027816
NCBI-ProteinID:
XP_067252457
LinkDB
All DBs
Position
10:complement(18341595..18356399)
Genome browser
AA seq
704 aa
AA seq
DB search
MFSIGGISSHIYKERLHAEGMGTNDNALKYLNQDYEELKRECVESGRLFEDPCFPAVPQS
LGFKELAPNSSKTRGVQWIRPTELSNNPQFIVGGATRTDICQGALGDCWLLAAIGSLTLN
DKLLHRVVPHGQSFTDDYAGIFHFQFWQFGEWVDVVIDDRLPVKDKELMFVHSAEGNEFW
SALLEKAYAKLHGSYEALSGGSTTEGFEDFTGGVAEMYELRKAPKDLHRIIAKALERGSL
LGCSIDITSAFDMEAVTFKKLVKGHAYSVTGLREVNFRGSKERLIRIRNPWGQVEWTGAW
SDNSSEWNGIEPAEREEMNNHMEDGEFWMSFQEFKRQFSRLEICNLTPDALSEDSLNFWN
TIKFNGTWRRGSTAGGCRNHPNTFWINPQYKITLLEEDDDPEDDEVACTFMVALMQKDRR
RYRKQGQDMHTIGFALYEIPEEFRGSQSVHLKKDFFLRKSSCARSDTFINLREVSARLKL
PPGEYLIVPSTFEPGKEADFVLRVFTEKQSETQEMDDEISFNLEDDEEVSEENIDNSFKK
MFAQLSGEDMEISVHELRTILNRVVGKHKDLKTDGFGMESCRCMVSLMDKDGSAKLGIVE
FQILWNKIRKWLGIFRQFDLDKSGTMSSYEMRLAVESAGFKLNNKLHQILVARYSDGDTI
DFDNFVCCLVKLEAMFKAFRELEREGSGIAELNISEWLYMTMCG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaattgggggaatttcgtcgcatatctacaaggagcgcttgcatgcagaaggg
atgggaaccaatgacaatgcactcaagtacctgaaccaggactacgaggagctgaagagg
gagtgtgtggagagcggtaggctgtttgaggacccctgctttcccgcagtgccccagtca
ctgggcttcaaggagctcgcgccaaactcctccaaaacacgcggtgtgcagtggataagg
cccactgagctgtcaaacaatcctcagttcatagtgggaggagcgacacggacagatatt
tgccagggggctctaggtgactgttggctgttggctgccatagggtctctgactttaaac
gacaagctgcttcacagagttgttcctcatggacaaagctttacggacgattatgccggc
atcttccatttccagttctggcagtttggcgagtgggtggacgtcgtgattgacgaccgc
ttgcctgtcaaggataaagagctaatgtttgttcactcagcagaaggaaatgagttctgg
agtgctcttttggagaaggcctatgccaagctgcatggctcatatgaagctctgtccgga
ggttccaccaccgaaggttttgaggacttcacaggtggagtggccgagatgtacgagctg
cgtaaagctcccaaagacctgcaccgcatcattgccaaagccttggagagaggctcgctg
ctgggctgctccattgatatcaccagtgcctttgacatggaggccgtgacctttaagaag
ctggtgaaggggcatgcgtactccgtcacaggtctcagagaggtgaatttccgtggcagc
aaagagagactgatccgcatccgaaacccttgggggcaagttgaatggacaggggcttgg
agtgacaattcttctgagtggaatggaattgaaccagcagaaagagaggaaatgaacaac
cacatggaggatggcgagttttggatgtcatttcaggagttcaaacgtcagttttctcgt
ctggagatctgtaacctcacaccagatgctcttagtgaagactctttaaatttctggaac
acgattaagtttaacggcacctggagacgaggaagtacagcagggggctgcaggaaccac
cccaatacattctggataaatcctcaatataagatcacgctactggaggaagatgatgat
cctgaggatgacgaggtggcctgcacctttatggtggccttgatgcagaaggacagacgg
cgttaccgcaagcaaggacaggacatgcacaccatcggctttgctttgtatgagatccct
gaagagtttcgtggttcccagagtgtgcatctcaagaaggactttttcttgcgtaagtcg
tcctgtgcgcgctcggacaccttcattaatctgcgagaggtcagtgcgcgactgaaactg
ccaccgggcgagtatctcattgtcccttccacttttgagcctggaaaagaggctgacttc
gtcctgcgagtcttcactgagaaacagtcagaaactcaagaaatggatgatgagatttca
tttaacctggaagatgatgaggaagtttcagaggagaacattgataactcttttaagaaa
atgtttgctcagctgtctggagaggacatggagatttcagttcatgagctcaggaccatt
ctgaaccgagtggtgggcaaacacaaggacttgaagacagatgggttcggcatggagtcg
tgtaggtgcatggtcagcctgatggataaagatggcagtgcaaaactgggaattgtggag
ttccagattctatggaataaaatcaggaagtggctgggtattttcagacagtttgatctg
gataaatctggcacaatgagctcctatgaaatgcgcctggctgtggagtcagctggtttt
aaactgaataacaagctacatcagatactggtggcaagatattccgatggagatacaatt
gactttgacaactttgtctgttgcctggtcaaactggaggccatgttcaaggcttttaga
gagctggagagagaggggtcaggcatcgcagaactcaatataagtgagtggctgtacatg
accatgtgtggatga
DBGET
integrated database retrieval system
