Chanodichthys erythropterus (predatory carp): 137034556
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Entry
137034556 CDS
T10334
Symbol
skic3
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137034556 (skic3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137034556 (skic3)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
137034556 (skic3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_14
TPR_19
TPR_8
TPR_16
TPR_11
TPR_17
TPR_12
TPR_CcmH_CycH
TPR_9
ANAPC3
TPR_MalT
Fis1_TPR_C
ARM_TT21_2nd
ARM_TT21_C
SHPRH_helical-1st
HAT_PRP39_N
PknG_TPR
TPR_15
TPR-S
Motif
Other DBs
NCBI-GeneID:
137034556
NCBI-ProteinID:
XP_067263690
LinkDB
All DBs
Position
13:complement(46616661..46643332)
Genome browser
AA seq
1568 aa
AA seq
DB search
MSSKEVKAELKNAREAIKNKEFKEALKHCKAVLKLEKNNYNAWVFIGVAATELQQPDQAQ
IAYRKASELEPEQLLAWQGLANLYEKSDQADFKAELPKIYQRLITLYETSDKAKCFEVSK
KLVEVYQSEKNYLQVARVWRRLIQMKEGVEGVEDSELLELWKEMTRLLQDTVEDQDNETQ
QHLISAFERALQMTVDVPSEAHRSLSQDYIKCLSKLPHEAAKLKEVCDATLSCYPTHSYP
LEALSEHYIKSGDCNEEAVCCFNRLSELDPYNSHAHFGLGIKACQDKKYEDAIKSIGLGL
KRMRSSIIGWYNLALAQLKMHKYFDSATSSSQGLKSSVGNSDDWTQKLQRLRLDALVRTG
RDQDADEALQMLAQISDAKNDPVLLALKGRAHLQKGQTEEAFQVSAELLSSHPGSVEGLT
LRGLTHVAKEQLKQAEESFLEALSRSPDDGELYFLLGRLYWNMGEEIRRDRSKAHTHLLK
AAKLDPYLGSVFRFLGHYYREVAKDQGRARGCYKRAFELDSSDAEAGAATVDLSMEQGDM
DSALTVLQSVTERATPGSAKWAWMRRGLYHLKIGQHQQAIADLQAALRADPQDWVCWECL
GEAYLNRRSFTAALKAFDKAHLLQPTSIYSLYQMAAIKQILGRFKEAASEYRQILEQEEY
VPALKGLGECLLALAKSALDDYLDGRAVDLIQNAIHYLFSAVKQRPDLSCLWKLLGDACT
TCRTVSTNRVKVLVPGALCGMDPPDQSHTLSQRQLLSVGERCFGHALKLMPEAPSLWCDL
GLNYYHQSRLLSCLYPEEDPQPLLEKALQCVKKAIMLDSANHTYWNALGVVTMAKGIENF
ALAQHSFIKSVKAESNNVVAWTNLGALYLKKGNIELSHEAFKIAQSLEPLYVNCWIGQAL
IAETVGSYDTMDLFRHTTELSTHTEGVKGYAYWVCSTLLDRSNRDSELYLYNIVQMNAVS
AAQVALSKYTERIQTDPDAFIMLGYLNTHLQLRKQATEAYRRAVELLQASPLTDKVSFAL
RGYGRALSDDGQWEEAVRIYSSTSLEELHDLIGLALACFKIGRLPESIQAYEKALSVASS
EKEKACILTALALIQHRLGSMDHAKTLLFKCSMLKEPIPESLQCLCALGLAQGDVTLASA
TLAELLKLGEPVGGAVEEYCLLTCTLLALKGNFSGVHREASRAIHRNPGNPSLWALLSRL
VPQYCPNKASGGAVAGSVACHASLTLGKRALLYSGVNQLASGRHSGEDRRRNALKTIQRA
VLLCPDDPAGWAGLMAACHTENTACLLSGSAPRREDLEKAHMTLVSEKVKGLQGEDGLLA
QALEGWVLQQAVTGLKQSGQYDQAETLCSQVLSVSPEHPVVFLMLRQVQCERLLQSEAGN
SVPPAVLDQLSAAVMANLTSVSAWHWLAEVYRSQGLLAQASVAYRQSLQLASQLGDHNGK
MSSLLRLALLALMPCLAGVCVSEWKDLVLEASAEVLKMGISPVALLFQALLQFSIKMGAR
ETRRLLERIVYASASGSSETIASVARWYLLRHLHAKDDLELIDTLLLKATAAGDSRLVDF
HRRLYPSS
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtaaagaagtgaaagctgagctgaaaaatgcaagagaagccattaaaaataag
gagtttaaagaagctttgaaacattgtaaggctgttctcaagcttgagaagaataactat
aatgcttgggtgttcattggagtggcagccacagagctgcagcagccggatcaggcacag
atcgcctacagaaaggcctctgaactggagccagagcaactgctggcatggcagggttta
gcaaatctgtacgaaaaaagtgaccaagcagatttcaaagctgaactgccaaagatttac
cagagacttattacactgtatgaaacctcagacaaagcaaaatgtttcgaagtgagcaag
aagttggtggaagtctatcagtcggagaagaactatttacaggtggccagagtgtggcgg
aggttaatccagatgaaggagggagtggaaggggtggaggattcagagctgctggagctg
tggaaggagatgaccagactcctgcaggacactgttgaggatcaggacaatgagactcag
cagcacctgatctcagcatttgaaagagctttgcaaatgacagtagatgtgcccagtgaa
gcccacaggagcctctcacaggattacattaaatgtctttctaagcttcctcatgaggcg
gccaagctaaaagaggtttgtgatgctacgctgtcctgctatccaacacactcctaccct
ctagaggccctcagtgagcactacatcaaatcaggtgactgcaatgaagaagctgtctgt
tgtttcaaccgtctctcagaactggatccttacaactcacacgctcactttggtcttggt
attaaagcttgtcaggataaaaaatatgaggatgccatcaaaagtattggtctgggactg
aaacggatgcgctcgtccatcattgggtggtataatcttgctctggctcaactaaaaatg
cataaatactttgacagtgccacatcttccagccaaggcctgaagtcgagtgtggggaat
tctgatgattggactcaaaagctgcagaggttgagactagatgccctggtgaggacggga
agagaccaggatgctgatgaagctctgcagatgcttgcacagatttcagatgccaaaaat
gacccagtgcttttagcattaaagggaagagctcacttgcaaaaaggccaaactgaggaa
gcatttcaggtttcagctgagctgctaagctctcatccaggatctgtggagggtctcact
ctgagggggctgacgcatgttgctaaagaacagctcaaacaagctgaggagagctttctg
gaggctttatccagaagcccagatgatggggagttatacttcttgctggggcgcctgtac
tggaacatgggagaggaaatacgaagagaccgtagcaaagcccatacacacttgctcaag
gctgctaaactggacccgtatcttggttcagtgtttcgtttcctgggtcattactacaga
gaggtggcaaaggatcagggcagagccagaggctgctataagagagcatttgagctggat
tcctctgatgcagaggctggagcggctactgtagacctcagcatggagcagggagacatg
gactcagctctgactgttctgcagtctgtgacagagagagccactcctggctctgctaaa
tgggcctggatgaggagaggtctctaccacctcaagattggccagcaccaacaggctatt
gcagatctgcaggcggcgttaagggctgatcctcaggactgggtctgctgggaatgttta
ggtgaggcttacctgaaccgcaggagtttcacagctgctctgaaagcctttgataaagca
catctacttcagcccacctccatctacagcctctatcagatggccgccatcaaacagatc
ctgggtcggttcaaagaggctgcctcagagtacaggcagatcttagagcaggaggaatat
gtgccggcattgaaaggtcttggtgaatgcttgttagccttggctaaaagtgcactggat
gactatcttgatggaagagctgtagatctgatacagaatgccatccattacctcttcagt
gctgtaaagcaaagaccagacctgtcatgtctatggaagttacttggtgatgcctgcacc
acatgcagaactgtgtccacgaaccgagtcaaagtgctggttcctggagctctatgtgga
atggatccccccgatcagagccatacactgagccagagacagctcctcagtgtaggagaa
aggtgctttggtcatgctttgaaactgatgccggaggcccccagtctgtggtgtgacctc
ggcctgaactactaccaccaatccagattgctcagctgcctgtatcctgaggaggatccc
cagcctctgctggagaaagccctgcagtgtgtgaagaaggcgatcatgctggacagtgct
aatcacacatactggaacgcccttggggtcgtaaccatggcaaagggaatagaaaacttt
gcacttgcacaacacagtttcatcaaatccgtaaaagcggagtcaaataacgtggttgca
tggactaatcttggtgctttgtatctgaagaagggaaatatagagctctctcatgaagct
ttcaagattgctcagtctctagagcccctctatgtgaactgctggatcggacaggctctc
attgctgagaccgttggcagttatgacaccatggaccttttcagacacaccacagaactg
agcactcatactgagggagtgaagggttacgcatactgggtttgctccacactgctggac
aggagcaacagagactcagagctctacctctacaacatagtccagatgaacgctgtctct
gctgcccaggtggctctgagcaagtacactgagaggattcaaaccgaccctgacgccttc
atcatgctcggatacctgaacacacacctgcagctgaggaaacaggccactgaggcatat
cgcagagctgtcgagttgcttcaggcatcccctctcacagacaaggtcagctttgctctg
aggggttacggacgagccctcagtgatgatggacagtgggaagaagcagtgcgtatttat
tcttccacatccctagaggagctgcatgatctcatcgggctggcgctcgcctgtttcaaa
atcggtcgcctgccagagagcattcaggcctatgagaaagccctttcagttgcctctagt
gagaaggaaaaggcctgtatactcactgcactggccctgatacagcacaggctgggcagc
atggatcatgccaaaacacttctcttcaagtgctccatgcttaaagagcccatcccagag
agcctgcagtgtctctgtgctctgggtttggctcagggggacgtgaccctggcaagtgct
acactcgccgagctgctgaaactgggggaacctgtaggaggcgctgtggaggagtactgt
ctgctcacttgcaccctgctggccctgaagggcaactttagcggtgtacatagagaggct
tctagggctatacacaggaacccagggaatccatctctctgggctcttctctccagactg
gtgccacagtactgccccaacaaagccagtggaggcgctgtggccggcagtgtggcatgt
catgccagcttgacacttggaaagagggcgttgctctacagtggagtgaatcagttggcc
tcaggccgccactctggtgaggacagaagacgcaatgctctgaaaacaatccagagagct
gtgctgctgtgcccagatgatcctgctggatgggcggggctaatggccgcctgtcacaca
gagaacacggcatgcttactctcaggctccgcccctcgcagagaagatcttgagaaggcg
cacatgaccctggtgtctgaaaaagtgaagggcctgcagggagaggacgggctcttggct
caggctctggagggctgggtgctgcagcaggccgtgactggactcaaacagagtggccaa
tatgaccaggcagaaactctttgctcccaggttctgagtgtctctccagagcatcctgtg
gtgttcctgatgttgaggcaggttcagtgtgagcgcctcctgcagtctgaggccggtaac
tctgttcctcctgctgtgctggatcagctcagtgctgctgtcatggccaacctcacatct
gtgtccgcctggcattggttggcagaagtttaccgctctcagggtctgctggctcaggcc
tctgtggcttatagacagagtcttcagctggcatctcagctgggagatcacaacgggaag
atgagcagcctgctccgactagccctgctggcgctcatgccatgtttggctggtgtctgt
gtctctgagtggaaggatctggtgttggaggccagcgctgaagtcttaaaaatgggcatc
tcaccagtagctctgctcttccaagccttactgcagttctccataaaaatgggcgccagg
gagacccgtcgcctgttggagaggattgtttatgcttcagcctcaggcagctctgaaaca
atagcatcagtggcacgttggtacctcctgcgccacctgcacgccaaagatgacctggag
ctgattgatacgctgttgttgaaggctacagcagctggagacagcagactggtggatttc
cacagacgcctttacccatccagctga
DBGET
integrated database retrieval system
