Chanodichthys erythropterus (predatory carp): 137037813
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Entry
137037813 CDS
T10334
Name
(RefSeq) collagen alpha-1(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04510
Focal adhesion
cery04512
ECM-receptor interaction
cery04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137037813
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137037813
09142 Cell motility
04820 Cytoskeleton in muscle cells
137037813
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cery00535
]
137037813
Proteoglycans [BR:
cery00535
]
Extracellular matrix (ECM) proteoglycans
Others
137037813
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
137037813
NCBI-ProteinID:
XP_067268215
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All DBs
Position
15:8907819..8964234
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AA seq
939 aa
AA seq
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MAPHLSMSRSRIGRRTLAGCLTRMIVFTLLCAPALAQLDLNRLDGDTVCPTMKNGQDDLP
GFDLITQFQLDVIPMRGVRKVEGSTPLQVAYRLDKEANFQIPTRLNFPRGFPDEYSFMTT
FRMIKNTVNKVWNIWQVVDEDGLKQAGMRLNGDQQALEFFLTTMEGDVQTVTFPGLSVLF
NTKWHKVMVGVEKELVTLYVDCHPVDQKPIKRKGYVNTEGDTLIGRLDSDPNTSVVFELQ
WMLIHCDPKRAQRESCTELPLAEPDPKPIPGPPGPEGPEGPRGPQGEDGRDGRDGIPGTP
GTPGAQGSKGDRGEVGLPGQRGLQGAPGPMGPMGPMGPRGPVGERGLPGFPGSAGPPGPE
TVGPPGPPGKPGTPGDEGNIGPEGPPGPRGGLGLPGPPGPPGPPGPAGPQGAGNPEGSGE
TCQTTCPAGPQGLPGLPGMKGHRGLPGVDGVPGIQGEKGEQGTAGEQGPPGRAGDDGQRG
PIGFPGAHGDKGDRGPPGFNGIPGPTGPPGSPGVEGIRGRQGHPGPKGDDGAIGAPGEKG
AAGAKGDTGEPGKHGSDGAPGAPGEKGDPGLPGAIGVRGIVGIPGLPGKQGLVGPAGQKG
EIGAVGLTGPVGLPGKDGAPGPAGEDGTPGAKGATGETGKQGPVGPMGPQGVQGDKGDQG
LMGPRGIKGHTGHKGDQGPVGPIGPKGSEGDPGVSGEPGVKGDQGPPGITGIKGERGEKG
QRGATGADGRPGQPGHEGLTGPQGARGLEGERGLPGSPGPRGLPGPKMNDEKIREICSVI
VEEHLDAYKKELAKKPLPIGAPGSPGLMGPPGPPGPAGPAGEAGPRGVMGPKGPQGYYGL
PGKPGVKGDAGQKGDKGDNGIGIPGIPGEPGPQGPAGKPGIGKDGQDGARGEAGVPGTPG
TPGVRGAQGPPGLCDPSNCYRPQPLYLVGGKKSVNIKGP
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcacctcagcatgagcaggagtcggatcgggcgacggacgttggcaggatgt
ttaacacggatgattgttttcacgttgctctgtgctccagctctcgctcagctggatttg
aacagattagacggcgacacggtgtgcccaaccatgaagaatggacaagatgaccttcca
ggatttgatctaatcacacagtttcagttggatgtcatccccatgaggggcgtcagaaag
gtagaaggttccacacccctccaggtggcgtacagactcgacaaagaggccaacttccag
atcccaaccaggctgaactttccaaggggcttcccagatgagtattccttcatgactacc
ttccgcatgatcaagaacactgtgaacaaggtgtggaacatctggcaggtggtggatgaa
gacggcttgaagcaggcaggtatgcgtctgaatggagaccagcaggccctagagttcttc
ctcaccaccatggaaggagacgtccagaccgtcacctttccgggcctttccgtcctcttc
aacactaaatggcacaaagtgatggttggcgtggagaaggagctggtgacgctgtacgtg
gactgtcacccggtggaccagaagcccatcaagaggaaaggctacgtcaacacggaagga
gacactctgatcggaagactggattctgatcccaacacctctgtagtgtttgagttgcag
tggatgctgattcactgtgacccaaagagagctcagagagagagctgtacagaactccct
ctggctgagccggatcccaaaccaatccctggtccccctggccctgagggtcctgagggg
cctcgtggaccccaaggagaagatggcagagatgggagagacggtattccaggtaccccg
ggcacccctggagctcagggcagtaaaggagatcgaggtgaggttggactgccaggacaa
agaggactgcagggggccccaggaccaatgggaccaatgggccccatggggccacgagga
ccggtgggagaaagaggtcttcctggtttccctggatctgccggaccccctggaccagag
actgttggccctccaggacccccagggaagcctggtactccaggagatgagggaaacatc
ggaccagagggtcctcctgggccaagaggaggacttgggctcccaggaccaccaggccca
ccaggacctccaggaccagcagggccacaaggtgctgggaaccctgagggaagtggggag
acttgccagacaacatgcccagctggaccacagggattgcctggtctgccagggatgaag
ggacatcgtggtcttccaggtgtggacggtgtgccaggtatccaaggtgaaaagggagag
caaggaaccgctggagagcaaggtcctcctggacgtgcaggagatgatggtcagcgaggt
ccaatcggattccctggagctcatggcgataaaggagatcggggtccgcctggattcaac
gggatcccaggacccaccggaccaccaggatccccaggtgttgaaggcatcagagggcga
cagggacatcctggtcctaaaggagatgatggtgcgatcggagccccaggagagaaagga
gctgctggtgccaagggtgacactggtgagccaggaaagcatggatctgatggagcacca
ggagctccaggagagaagggagacccaggtctgcccggagccattggtgtcagaggaatt
gtgggaattccaggtttaccaggaaaacagggactcgtgggtcctgcaggccaaaagggt
gaaattggtgctgtaggactgactggtccagttgggcttcctggtaaagatggagcacct
ggaccagcaggagaagatggaactccaggagccaaaggagccactggtgaaacaggaaaa
cagggtccagtcggcccaatgggcccgcaaggagtccagggagataaaggtgaccaagga
ctcatgggtcctcgtggaatcaagggtcacacgggtcataaaggagaccagggtccagtg
ggtcccatcggtcccaaaggaagtgagggagatccaggtgtttcgggagaaccaggcgtg
aagggtgatcaggggcctccgggtattactggaatcaagggagagcgtggagagaaaggc
cagagaggagctacaggagctgatggtcgtccaggacagccaggccatgagggtctgaca
ggaccccagggagccagaggtctggagggggaacgaggtctgccaggatcccctggtccc
agaggtctacctggtcccaagatgaatgacgagaagatccgtgagatttgttcagttatt
gttgaagaacatttagatgcctacaagaaggaattagccaagaaacctcttcccattgga
gcccctggaagtccaggactcatgggaccacctggaccaccgggaccagcaggtcctgca
ggagaagccggacccagaggagttatgggccccaaggggcctcaaggatactatggcctt
cctggaaaaccaggagttaaaggtgatgcaggacaaaaaggtgacaagggcgataatgga
attggtattccaggaattcctggagaacccggacctcaaggaccagctggcaagcctggc
attggcaaggatggtcaagatggtgccagaggagaggccggtgtgcctggaaccccagga
acccctggagtgagaggagcccagggtccccctggtctttgtgatccttcaaactgctac
aggcctcaacctctttacctggttggcgggaagaaatccgtcaacatcaagggtccatga
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