Canis lupus familiaris (dog): 404013
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Entry
404013 CDS
T01007
Symbol
SLC6A12
Name
(RefSeq) sodium- and chloride-dependent betaine transporter
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04721
Synaptic vesicle cycle
cfa04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
404013 (SLC6A12)
04721 Synaptic vesicle cycle
404013 (SLC6A12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfa02000
]
404013 (SLC6A12)
Transporters [BR:
cfa02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
404013 (SLC6A12)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
404013
NCBI-ProteinID:
NP_001003322
Ensembl:
ENSCAFG00000015756
VGNC:
46455
UniProt:
P27799
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All DBs
Position
27:4389231..4413912
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AA seq
614 aa
AA seq
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MDRKVAVPEDGPPVVSWLPEEGEKLDQEGEDQVKDRGQWTNKMEFVLSVAGEIIGLGNVW
RFPYLCYKNGGGAFFIPYFIFFFTCGIPVFFLEVALGQYTSQGSVTAWRKICPLLQGIGL
ASVVIESYLNIYYIIILAWALFYLFSSFTSELPWTTCTNTWNTEHCMDFLNHSGARTATS
SENFTSPVMEFWERRVLGITSGIHDLGALRWELALCLLLAWLICYFCIWKGVKTTGKVVY
FTATFPYLMLVILLIRGITLPGAYQGVIYYLKPDLLRLKDPQVWMDAGTQIFFSFAICQG
CLTALGSYNKYHNNCYRDSIALCFLNSATSFAAGFVVFSILGFMAQEQGLPISEVAESGP
GLAFIAFPKAVTMMPLSQLWSCLFFIMLIFLGLDSQFVCVECLVTASMDMFPSQLRKSGR
RELLILAIAVFCYLAGLFLVTEGGMYIFQLFDYYASSGICLLFLAMFEVICISWVYGADR
FYDNIEDMIGYRPWPLVKISWLFLTPGLCLATFLFSLSQYTPLKYNNIYVYPPWGYSIGW
FLALSSMICVPLFVIITLLKTRGSFKKRLRQLTTPDPSLPQPKQHLYLDGGTSQDCGPSP
TKEGLIVGEKETHL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggacagaaaagtggcagtccccgaggacgggcctcccgttgtctcctggctccctgag
gagggagagaagttggaccaggaaggggaggaccaggtgaaggatcggggccaatggacc
aacaagatggagtttgtgctgtcagtggccggggagatcattgggctgggcaatgtctgg
aggtttccctatctctgctacaaaaatggaggtggggccttcttcatcccctacttcatc
ttcttcttcacctgcggcatcccggtgttcttcctggaggtggcgttgggccagtacacc
agccagggcagcgtgacagcctggaggaagatctgcccccttcttcagggcatcggtctg
gcgtctgtggtcattgagtcctatctgaacatctactacatcatcatcctcgcctgggct
ctcttctacctgttcagctcctttacctctgagctgccctggacgacctgtaccaacacc
tggaacacagagcattgcatggactttcttaaccactcgggagcccgcacagcgacctcc
tctgagaacttcacctcacctgtcatggaattctgggagagacgtgttttgggcatcacc
tcaggcatccatgatttgggggctctgcgctgggagctagctctgtgccttctgctggcc
tggcttatctgctacttctgcatctggaagggagtcaagaccacaggcaaggtggtgtat
ttcacagccacgtttccctacctgatgctggtcatcctgctgatccgaggcatcaccctt
cccggagcctaccagggtgtcatctattacctgaagcctgatttgcttcgcctcaaggac
ccccaagtatggatggacgcgggcacccagatcttcttctccttcgccatctgccagggg
tgcctgactgccctgggcagctacaacaagtatcacaacaactgctacagggacagcatc
gccctctgcttcctgaacagtgccaccagcttcgcggctggcttcgtggtcttctccatc
ctgggcttcatggcccaagagcaggggctgcccatctctgaggtggccgagtccggtcct
ggtctagccttcatcgcgttccccaaggctgtgacaatgatgcccttatctcagctgtgg
tcctgccttttcttcatcatgctcatcttccttgggctggacagccagtttgtctgtgtg
gagtgcctggtgacagcctccatggacatgttccccagtcagctccggaagagtgggcgg
cgggagctcctcatccttgccattgctgtcttctgctacctggcggggctttttctggtc
acggagggcgggatgtatatcttccagctgtttgattattatgcctccagtggcatatgc
ctgctcttcctggcgatgttcgaagtgatctgcatcagctgggtgtacggggctgatcgt
ttctatgacaacattgaagacatgattggctaccggccatggcccttggtgaagatttcc
tggctctttctgacccctggactctgcctggccaccttcctcttctccttgagccagtac
acacctctcaaatacaacaacatctacgtgtaccctccctggggctactccatcggctgg
ttcttggctctctcctccatgatctgcgtcccactctttgtcatcatcactcttctgaag
acccggggttccttcaagaagcgcctacgacagcttaccacccctgaccccagcctgcca
cagcccaagcaacacctgtatctggatggtggtaccagccaggactgcgggccttcccca
acaaaggagggactaatagttggggagaaggagacccacttgtag
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