KEGG   Canis lupus familiaris (dog): 490828
Entry
490828            CDS       T01007                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    490828 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cfa03400]
    490828 (TDP1)
DNA repair and recombination proteins [BR:cfa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     490828 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL DUF7096
Other DBs
NCBI-GeneID: 490828
NCBI-ProteinID: XP_005623796
Ensembl: ENSCAFG00000017500
VGNC: 47218
UniProt: A0A8I3NDZ4 A0A8C0PVZ0
LinkDB
Position
8:60602950..60687315
AA seq 639 aa
MSQEGDYGKWTISSSDESEEEKPKLDKPSTSSLPHAGPRAANEPSYTCSEARKVAYKRKI
SPVKFSNTDSQVSSPKRQRSGSQEDLGWCLSSSDDELQLETQQKQVENVVVREEHGVSSS
KGSATQRTGNHSPPAHHGFKEEEEEYETSGEGQDIWDMLAKGNPFQFYLTRVSGIKPKYN
SGALHIKDILSPLFGTLVSSAQFNYCFDVDWLIKQYPPEFRKKPILLVHGDKREAKAHLH
AQAKPYENISLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIHADWHQKTQGIWLS
PLYPRMAQATHRSGESATHFKADLISYLMAYNAAPLKEWIDTIHEHDLSETNVYLIGSTP
GRFQGSHKDNWGHFRLRKLLREHASSITKGESWPIVGQFSSIGSMGADDSKWLCSEFKES
LVTLGKESRTPGKSAVPLHLIYPSVENVRTSLEGYPAGGSLPYSIQTAEKQNWLHSYFHK
WMADTSGRSNAMPHIKTYMRSSPDFSQIAWFLVTSANLSKAAWGALEKNGAQLMIRSYEL
GVLFLPSAFGLDSFKVKQKFFSGSKEPAAAFPVPYDLPPELYGNKVSETPVKRGESTFIE
HLKHARNFHRSAMDLEHSLYQSTRYTWEHVGSLLRILKH
NT seq 1920 nt   +upstreamnt  +downstreamnt
atgtctcaggaaggtgattatgggaagtggacaatatccagtagtgatgagagtgaggag
gaaaagccaaaactagacaagccatctacatcttccctcccccatgctgggccaagagca
gcaaatgagccaagttacacctgttctgaggctagaaaagttgcctataaaagaaaaatc
tcacctgtgaagttcagcaacacagattcacaagtttcatctccgaaaaggcagaggagt
ggttcccaggaagacctaggttggtgtctctccagcagcgatgatgagctgcaactggaa
acacaacagaaacaggttgagaacgtggtggtcagagaggagcatggagtctcttcttcc
aagggcagtgccacccaaagaactggaaatcacagccctcccgcccaccatgggttcaaa
gaggaggaagaggagtatgaaacctcaggggaaggccaggacatttgggacatgttggca
aaagggaaccccttccaattctacctcactcgggtctcgggaatcaagccaaagtataac
tctggagccctccacatcaaggatatcttatctcctctatttgggacacttgtatcttca
gctcagtttaactactgctttgatgtggactggctcataaaacagtatccaccagagttc
aggaagaaaccaatcctgcttgtgcacggagataaacgagaagctaaggctcacttacat
gcccaggccaagccttatgaaaacatttccctctgccaggcaaagttggatattgcattt
ggaacacaccacacgaaaatgatgttactactgtatgaagaaggcctccgggtggtcata
cacacctccaacctcatccatgccgactggcaccagaaaactcagggaatatggttgagc
cccttatacccacggatggcccaggcaacccacagatctggagaatcagcaacacatttt
aaagctgatcttatcagctatttaatggcttataatgctgctcctctcaaggagtggata
gataccatccacgaacatgatctctcagaaaccaatgtttatcttattggatcaacccca
ggacgctttcaaggaagccataaagataattggggacattttaggcttagaaagcttctg
agagagcacgcctcatccataactaaaggagagtcttggccgatagtaggtcagttttca
agcattgggtccatgggagctgacgactcaaaatggttgtgttctgagtttaaagaaagc
ttggtgacgctggggaaggagagcaggactccagggaagagtgctgttcctcttcatctg
atctatccttctgtggaaaatgtgcggaccagcttagaaggatatccagctgggggctct
cttccctatagcatccagacagctgaaaaacagaattggctccattcctattttcacaaa
tggatggctgacacatctggccgcagcaatgctatgccacatattaaaacatatatgaga
tcctctccagacttcagtcaaattgcttggttccttgtcacaagcgcaaatctgtccaag
gccgcctggggagcattagagaagaatggtgcccagttgatgatccgttcctatgagctt
ggggtccttttcctgccatcagcatttggcctggacagcttcaaagtaaaacagaaattc
ttctcagggagcaaggagccagcagccgcctttcctgtgccatatgacctgcctccagaa
ctgtatggaaataaagtttctgaaacacccgttaaaagaggggaaagtacgtttattgag
catctaaaacatgccaggaacttccacagatcggccatggatttggaacattccttatac
caaagcaccagatacacatgggaacatgtgggttccctcctgagaatcttaaaacactga

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