Corynebacterium faecale: CFAEC_02070
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Entry
CFAEC_02070 CDS
T09289
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cfac
Corynebacterium faecale
Pathway
cfac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CFAEC_02070 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfac03021
]
CFAEC_02070 (rpoB)
03400 DNA repair and recombination proteins [BR:
cfac03400
]
CFAEC_02070 (rpoB)
Enzymes [BR:
cfac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CFAEC_02070 (rpoB)
Transcription machinery [BR:
cfac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CFAEC_02070 (rpoB)
DNA repair and recombination proteins [BR:
cfac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CFAEC_02070 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
WJY91269
LinkDB
All DBs
Position
445641..449255
Genome browser
AA seq
1204 aa
AA seq
DB search
MLSEPKSDTSSSADQLLKNTSGCDDHTSLDQPRVTHPREVLEGPILAVSRQTKSVVDIPG
APKRYSFAKVSAPIEVPGLLDLQLDSYSWLIGTSEWRARQQEEFGEGARITSGLENILEE
LSPIQDYSGNMSLSLSEPRFEPVKNTIDEAKEKDINYAAPLYVTAEFVNNTTGEIKSQTV
FIGDFPMMTDKGTFIINGTERVVVSQLVRSPGVYFDQTIDKSTERPLHAVKVIPSRGAWL
EFDVDKRDSVGVRIDRKRRQPVTVLLKALGWTTEQITERFGFSEIMMSTLESDGVANTDE
ALLEIYRKQRPGEQPTRDLAQSLLDNSFFRAKRYDLAKVGRYKINRKLGLGGDNDGLMTL
TEEDIATTIEYLVRLHAGERVMTSPTGEDIPVETDDIDHFGNRRLRTVGELIQNQVRVGL
SRMERVVRERMTTQDAESITPTSLINVRPVSAAIREFFGTSQLSQFMDQNNSLSGLTHKR
RLSALGPGGLSRERAGIEVRDVHPSHYGRMCPIETPEGPNIGLIGSLASYARVNPFGFIE
TPYRRVIDGKLTDQIDYLTADEEDRFVVAQANTHYSDDGVIIDESVTVRLKDGDIAMVAN
VDVDYMDVSPRQMVSVGTAMIPFLEHDDANRALMGANMQKQAVPLVRAEAPFVGTGMEQR
AAYDAGDLVITPKAGVVENVTADIVTIMDDEGKRDTYVLRKFQRTNQGTSYNQKPLVSQG
QRVEAGQVLADGPGTFNGEMSLGRNLLVAFMPWEGHNYEDAIILNQNIVEQDILTSIHIE
EHEIDARDTKLGAEEITRDIPNVSEDVLKDLDERGIVRIGADVRDGDILVGKVTPKGETE
LTPEERLLRAIFGEKAREVRDTSMKVPHGETGKVIGVRHFSREDDDDLAPGVNEMIRVYV
AQKRKIQDGDKLAGRHGNKGVVGKILPQEDMPFMPDGTPVDIILNTHGVPRRMNIGQVLE
THLGWLAAAGWSVDPEDPDNAELVKTLPADLLEVPAGSLTATPVFDGASNEELAGLLANS
RPNRDGDVMVNADGKATLIDGRSGEPYPYPVSIGYMYMLKLHHLVDEKIHARSTGPYSMI
TQQPLGGKAQFGGQRFGEMEVWAMQAYGAAYTLQELLTIKSDDVVGRVKVYEAIVKGENI
PDPGIPESFKVLLKELQSLCLNVEVLSADGTPMELAGDDDDFDQAGASLGINLSRDERSD
ADTA
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
gtgctatctgagccaaaatcggacacgagttcctcagcagaccaattgctcaaaaatacc
agcggttgtgacgatcatacgagccttgaccagccccgtgtgactcacccgcgtgaggtg
ctggaaggacccatcttggcagtctcccgccagaccaagtcagtcgtcgatattcccggc
gcacccaagcgttattcattcgcaaaggtgtccgcgcccattgaggtgccggggctacta
gatcttcaactcgattcctactcctggctgatcggcacgtctgagtggcgtgcacgtcag
caagaggagttcggcgagggagcccgcatcaccagcggcctcgagaatattctcgaggag
ctctccccaatccaggattactctggaaatatgtccctgagcctctcggagccacgcttc
gagccagtcaagaacaccattgacgaggctaaagaaaaggacatcaactacgcggcacca
ctgtatgtgaccgcggagttcgtcaacaacaccaccggtgagatcaagtcccagaccgtc
ttcatcggcgatttcccgatgatgaccgacaagggaaccttcatcatcaacggaaccgag
cgtgtggtggtcagtcagctcgtccgctccccgggcgtgtacttcgaccagaccatcgac
aagtccaccgagcgtcccctgcacgcagtgaaggtaattccttcccgcggtgcatggctc
gaattcgatgtggacaagcgcgattccgtcggcgtccgcattgaccgcaagcgccgtcag
ccggtcaccgtgctgctgaaggcactcggttggaccaccgaacagatcacggagcgcttc
ggcttctccgagatcatgatgtccaccctggagtccgatggtgttgccaacaccgacgag
gccctgctggagatctaccgcaagcagcgtccgggcgagcagcccacccgcgatcttgcg
cagtccctgctggacaacagcttcttccgtgcaaagcgctacgatctggccaaggttggc
cgttacaagatcaaccgcaagctcggactcggtggcgacaacgacggtctgatgacactg
accgaagaggacatcgccaccaccatcgagtatctcgtccgcctgcatgcaggtgagcgt
gtgatgacctccccgacgggcgaggacatcccggtggagaccgacgacatcgatcacttc
ggtaaccgtcgtctccgcaccgttggtgagctcatccagaaccaggtccgtgtgggtctg
tcccgcatggagcgtgttgtccgcgagcgtatgaccacccaggacgcggagtccatcact
ccgacctccctgattaacgttcgccctgtatccgctgccatccgtgagttcttcggaacc
tcacagctgtcccagttcatggatcagaacaactcgctgtcgggtctgacccacaagcgt
cgtctgtcggctctcggcccgggtggtctgtcccgtgagcgtgccggcatcgaggtgcga
gacgttcacccgtcccactacggccgcatgtgcccgattgaaaccccggaaggcccgaac
attggcctgatcggttccctggcgtcctacgcccgcgtcaaccccttcggtttcatcgag
accccttaccgtcgtgtcatcgatggcaagctcaccgatcagatcgactacctgaccgct
gacgaggaagaccgcttcgttgtcgcccaggcaaacacgcactacagcgacgacggtgtc
atcatcgatgagtccgtgaccgtgcgcctgaaggatggcgacatcgctatggtggccaac
gttgacgttgactacatggacgtgtccccacgccagatggtttccgtgggcaccgcgatg
attccgttcctcgagcacgacgatgccaaccgtgccctcatgggtgcgaacatgcagaag
caggccgtgccactggtccgcgccgaggccccattcgtgggcaccggcatggagcagcgt
gcagcctacgatgcaggcgacctcgtgatcaccccgaaggccggtgttgttgagaacgtc
accgctgacatcgtcaccatcatggacgatgagggcaagcgcgacacctatgtgctgcgc
aagttccagcgcaccaaccagggcaccagctacaaccagaagccactggtcagccagggg
cagcgtgttgaggccggacaggtcctcgccgatggtccaggtaccttcaatggtgaaatg
tctctgggacgtaacctgctcgtggcgttcatgccatgggaaggtcacaactatgaggat
gcgatcatcctcaaccagaacatcgtggagcaggacatcctgacctccatccacatcgag
gagcacgagatcgatgcccgcgacaccaagcttggtgccgaggaaatcacccgtgacatc
ccgaacgtctccgaggacgtgctcaaggacctcgacgaacgcggtattgtccgcatcggt
gcagacgtccgtgatggcgacatcctggttggtaaggtcaccccgaagggtgagaccgag
ctgaccccggaggagcgactgctccgcgccatcttcggcgagaaggcccgcgaagtccgc
gacacctccatgaaggttccgcacggcgagaccggcaaggtcatcggcgtccgtcacttc
tcccgcgaggacgatgacgatctggccccgggtgtcaacgagatgatccgcgtctatgtc
gcccagaagcgcaagatccaggacggcgataagctcgccggccgccacggcaacaagggt
gtcgtgggcaagatcctgcctcaggaggacatgccgttcatgccggacggtaccccggtg
gacatcatcctgaacacccacggtgttccacgtcgtatgaacatcggccaggttctggaa
acccacctcggttggcttgcagccgccggttggtccgtggatcctgaggatcctgacaac
gctgaactggtcaagaccctgcctgcggacctcctcgaggttccggctggttccctgacc
gccaccccggtgttcgacggtgcctccaatgaggagctcgcaggtctgctcgccaactcc
cgcccgaaccgtgacggtgacgtcatggtcaacgcggacggcaaggcaacgctcatcgac
ggtcgttccggcgagccgtacccgtacccggtctccatcggttacatgtacatgctcaag
ctgcaccaccttgttgatgagaagatccacgcccgttccaccggcccgtactccatgatc
acccagcagccgctcggtggtaaggcccagttcggtggacagcgattcggcgagatggag
gtgtgggcgatgcaggcatacggtgccgcctacaccctgcaggaacttctgaccatcaag
tctgatgacgtggtcggccgtgtcaaggtctacgaggcaattgtcaagggcgagaacatc
ccggatccaggtatccctgagtccttcaaggttctcctcaaggagctccagtcgctctgc
ctgaacgtggaggtcctctccgctgacggcacaccgatggaactcgcgggcgacgatgac
gacttcgatcaggcaggcgcctcactgggcatcaacctgtcccgtgacgagcgttccgac
gctgataccgcatag
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