Clostridium felsineum DSM 794: CLFE_015170
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Entry
CLFE_015170 CDS
T08216
Symbol
pcrA_3
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cfb
Clostridium felsineum DSM 794
Pathway
cfb03420
Nucleotide excision repair
cfb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLFE_015170 (pcrA_3)
03430 Mismatch repair
CLFE_015170 (pcrA_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfb03400
]
CLFE_015170 (pcrA_3)
Enzymes [BR:
cfb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLFE_015170 (pcrA_3)
DNA repair and recombination proteins [BR:
cfb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLFE_015170 (pcrA_3)
MMR (mismatch excision repair)
Other MMR factors
CLFE_015170 (pcrA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
DEAD
Peptidase_M6
T2SSE
ResIII
Motif
Other DBs
NCBI-ProteinID:
URZ15477
LinkDB
All DBs
Position
1598696..1600552
Genome browser
AA seq
618 aa
AA seq
DB search
MKVLNHLNDNQLKAVTSDSKTILCLAGAGSGKTTVLTHRISYLNETQRVGGSGILCLTFT
RNAAKEMKDRIKLLMGEEEGGKVFCNTFHAFGISILKEWGFKIGYNKEFSIYDEEDKEDI
IKNILVDLCICQSKEAISTRDILSSLECMEHPEYKAEKYPALKNYILAAGEYRHRLKKNS
AVDLDMLLIDAVKLLEKCPEVREYYNKRYEYIFCDEFQDCDDIQMKLIKILKPRNLFVVG
DPDQCIYEWRKAKPKYIVNFEAYFPGCEVITLEDNYRSTGEIINAANKLICNNDDRVDKK
LISHKEGENIECITFENIEEEAEFIASTIRKSNKSLKDFAVLSRTNKQLNIVAQQLRESG
ISYQIINNSQDVFKKYDIRKILNFINFVINTKDDRAVKRAVNFPKAILNSTQISKIELKC
SEKNLSFFEGLQSLKFKDQDEIDLFLKRILSLNEFMIKENSNAYDVFKYVVELLDVQAIY
SEENRDSKNDDIQVALEKISHWTDIQEEINQSISISAFLKWLKTKDIQERLLEQKDAVKL
MTVHASKGLEFPVVFVIGMNEGIFPNRRSDIEEERRLFYVAVTRAKEKLYITRPNKVLYR
SGLEVDTEESQFIGEMNI
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtattaaatcatttaaatgataatcagcttaaagctgttacatctgattcaaaa
acaatcctctgtttagcaggggcaggaagtggaaaaactactgtccttacacataggatt
tcttatttaaatgaaactcaaagagtaggcggtagtggtatattgtgtcttacctttacc
agaaatgcagctaaggagatgaaggatagaattaaactccttatgggggaagaagaaggc
ggaaaagtattctgtaatacctttcatgcttttggtatttctatccttaaagaatgggga
tttaagattggatataataaggaatttagcatttatgatgaagaagataaggaagatatt
ataaaaaatattttagtggatttatgtatatgccaaagtaaagaagcaataagtacaaga
gatattcttagttcactggaatgtatggaacatccagagtataaagctgaaaaatatcca
gcattaaaaaattatatattggccgctggagaatacaggcacagactaaagaaaaattca
gctgtagatttggatatgctacttatagatgctgtaaagttattagagaaatgccctgaa
gttagagaatattataataagaggtatgagtatatcttttgtgatgaatttcaagattgt
gatgatattcagatgaagcttataaaaatacttaaaccaagaaatttatttgtagtaggt
gatcctgatcagtgtatttatgagtggaggaaagctaaacctaaatatattgtaaacttt
gaagcttattttccaggttgtgaggtaataacattagaagataactataggtctacaggg
gaaataataaatgcagccaataaattaatttgcaacaatgatgatagagttgataagaaa
cttatatcccataaagaaggagaaaatatagagtgtattacatttgaaaatattgaagaa
gaggcagaatttatagctagcaccattagaaaaagtaataaaagcttaaaggattttgct
gtgctttcaaggacaaataagcaacttaatatagtagcccaacagcttagagaaagtggc
atttcatatcaaattataaataacagccaagatgtatttaaaaagtatgatataagaaaa
atacttaattttataaattttgttattaatactaaagatgatagggcagtgaaaagagca
gttaactttcctaaagctattttaaattcaacacaaatatcaaaaattgagcttaaatgt
tcggaaaagaatttaagtttctttgaggggcttcaatcactaaagtttaaggatcaggat
gaaattgatttgtttttaaaaagaatattaagccttaatgagtttatgattaaggaaaat
agtaatgcatatgatgtttttaaatatgttgtagaattactagatgtacaagctatatat
tcagaagaaaatagagatagtaaaaatgatgatatacaagtagccttagaaaaaatatct
cactggacagatattcaagaggagataaatcagagcatttcaatttcagcttttctaaag
tggctaaagacaaaagatattcaggaaagattgttagagcaaaaggatgcggtaaagctc
atgacagttcatgcatccaaaggtctagaatttcctgtagtatttgttattggaatgaat
gaaggtatttttcctaacagacgaagtgatatagaagaagagagaagacttttctatgtt
gctgtaactagggcaaaggaaaaactctatataacaagaccaaacaaggttttatatagg
agtggactagaagttgatacagaagaaagtcagtttataggtgaaatgaatatataa
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