Caulobacter flavus: C1707_13710
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Entry
C1707_13710 CDS
T05702
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cfh
Caulobacter flavus
Pathway
cfh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C1707_13710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfh03021
]
C1707_13710
03400 DNA repair and recombination proteins [BR:
cfh03400
]
C1707_13710
Enzymes [BR:
cfh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C1707_13710
Transcription machinery [BR:
cfh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C1707_13710
DNA repair and recombination proteins [BR:
cfh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C1707_13710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
TmoB
IDH
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AYV47232
UniProt:
A0A2N5CKV6
LinkDB
All DBs
Position
2978995..2980011
Genome browser
AA seq
338 aa
AA seq
DB search
MIERNWNELIRPEKPQIETGADASRKARIVAEPLERGFGVTLGNALRRVLLSSLQGAAVT
AIQIDGVVHEFSSLEGVREDVVDIVLNIKQLAVRMHAEGPKRMTLRASGAGPVTAGQIET
PADIEILNPDHVLCTLDEGGSVRMEFTVNTGKGYVPADQNRPEDAPIGLIAVDALYSPVK
RVAYKVEPTREGQRLDRDKLTLEVETNGAVTPVDAVAYAARILQDQLQIFITFEEPKAKA
ADESKPELPFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLAGMGLHLGMDVPNWPPENIEDLAKKFDDQI
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaaagaaactggaacgagctgatccgtcctgagaagccgcagatcgaaaccggc
gccgacgccagccgcaaggctcgcatcgtcgctgaaccgctcgagcgtggtttcggtgtg
acgctcggcaacgccctgcgtcgcgttctcctctcgtcgctgcaaggcgccgccgtcacc
gccatccagatcgatggcgtggtgcacgagttctcgtcgctcgagggcgttcgcgaagac
gtcgtcgacatcgttctgaatatcaagcaactcgccgtgcgcatgcacgccgagggcccc
aagcgcatgaccctgcgcgcctcgggcgccggtccggtcaccgctggccagatcgaaacc
ccggccgacatcgaaatcctgaaccccgaccacgtgctctgcacgctggacgagggcggc
tcggtgcgcatggaattcacggtcaacaccggcaagggctacgtcccggccgaccagaac
cgtccggaagacgcgccgatcggcctgatcgccgtcgacgccctgtactcgccggtgaag
cgtgtggcctacaaggtcgagccgacccgcgaaggccagcgcctggaccgtgacaagctg
accctggaagtcgagaccaacggcgccgtcaccccggtggacgccgtggcctacgccgct
cgcatcctgcaagaccagctgcagatcttcatcaccttcgaagagcccaaggccaaggcc
gcggacgagtcgaagcccgagctgccgttcaacccggctctgctcaagaaggtcgacgag
ctggaactgtcggtccgttcggccaactgcctgaagaacgacaacatcgtctacatcggc
gacctgatccagaagaccgaagccgagatgctccgcaccccgaacttcggtcgcaagtcg
ctgaacgagatcaaggaagtgctcgccggcatgggcctgcacctcggcatggacgtgccg
aactggccgccggaaaacatcgaagacctggccaagaagttcgacgaccagatctaa
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