Caulobacter flavus: C1707_17160
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Entry
C1707_17160 CDS
T05702
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
cfh
Caulobacter flavus
Brite
KEGG Orthology (KO) [BR:
cfh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfh03016
]
C1707_17160
Enzymes [BR:
cfh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
C1707_17160
Transfer RNA biogenesis [BR:
cfh03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
C1707_17160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AYV47846
UniProt:
A0A2N5CUF6
LinkDB
All DBs
Position
3762673..3763242
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AA seq
189 aa
AA seq
DB search
MSLFPELDVPPSDRLFFGIFPPSPVAEAIAGRARDLKGGLGLSGAPLTPDRFHVTLHHIG
DYAGLPRGIVAQALEAGEAASSAAPFEATFDQAASFNNRGNNPFVLQGGEGLAELHAFQK
ALGLAMAHAGLGKQVARQFNPHVTLLYDRALAPETPTAPVSWTVSEFVLIHSLLGQTRHV
VLGRWPLKG
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgtttcccgaactggacgttccgccgtccgaccgcctgttcttcgggatcttt
ccgccgtcgccggtcgccgaggccatcgccggccgcgctcgcgacctgaagggcggcctt
ggcctgtcgggcgcgccgctgacgcccgaccgcttccacgtcaccctgcaccacatcggc
gactacgccggcctgccgcgcggcatcgtcgcccaggcgctggaggcgggtgaagccgcg
tcgtcggccgcgccgttcgaggcgaccttcgaccaggccgccagcttcaacaatcgcggc
aacaatccgttcgtgctgcagggcggggaggggcttgctgaactgcacgccttccagaag
gccctggggctggccatggctcacgccggtctcggcaagcaggtcgccagacagttcaat
ccgcacgtgacactgctttacgaccgcgccctggcgcccgagacgccgacggcgccggtg
tcatggaccgtttcggagttcgtgctgatccacagcctgctgggccagacccggcacgtc
gtgctcgggcgctggcccctgaagggttga
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