Cellulomonas fimi: Celf_1570
Help
Entry
Celf_1570 CDS
T01490
Name
(GenBank) metal dependent phosphohydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cfi
Cellulomonas fimi
Pathway
cfi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Celf_1570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfi03019
]
Celf_1570
Messenger RNA biogenesis [BR:
cfi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Celf_1570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
KH_1
RNase_Y_N
KH_KhpA-B
KH_PNO1_2nd
HDOD
KH_NusA_2nd
KH_2
UPF0242
Motif
Other DBs
NCBI-ProteinID:
AEE45704
UniProt:
F4H770
LinkDB
All DBs
Position
1720854..1722419
Genome browser
AA seq
521 aa
AA seq
DB search
MDPGVVATVVGLLGACLVALILVLVARREAAAQRVRAEQDVASIKDEARALLADAERRER
RLAEREQTLAGDRAQVEDLDRKARARAEEAADARREAQRLADEAAREADRTTAAAEREAQ
TRLAEADALAARRVLEAERAAIEELESASGLTREAALEELTRRLVERATNDAAAQVRRAE
AQARRTAEARARRIVATAIQRTAVATSAQASTVTLPLPSDDMKGRIIGKEGRNIRAFEAL
TGVNVLVDEQPGAVLLSCFDAERREIAQVALEALMADGRIHPQRIEAAYADALAGAEDRT
DAAGHDAAERAGVAGLHPELVRTLGRLRLRTSYGQNVLEHLVESALLAAQLAAETGTDVD
VARRGAFLHDVGKALTAEVPGTHALVGADLARRLGESPEVVNAIAAHHDEVAPETVEAVL
VQVADAISASRPGARREDLDQYVERMDKLEQLVAEHEGVRRALAMSAGREIRVVVEPERV
VDSDLPQLAVTIARHIERDLAYPGEIKVTVVRETRASATAG
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
gtggatcccggagtcgtcgccaccgtcgtgggactcctcggcgcctgcctcgtcgcgctc
atcctcgtcctggtcgcgcggcgggaggcggcggcgcagcgcgtgcgtgccgagcaggac
gtcgcgtccatcaaggacgaggcacgcgccctgctcgccgacgccgagcgacgcgaacga
cgactcgcggagcgtgagcagacgctggccggtgaccgggcgcaggtcgaagacctcgac
cgcaaggcgcgcgcacgggccgaggaggccgcagacgcccgccgggaggcgcagcggctc
gcggacgaggcggcgcgcgaggccgatcgcaccaccgccgcggccgagcgtgaggcacag
acgcgcctcgcggaggccgacgcgctcgcggcgcggcgcgtgctcgaggcggagcgcgcc
gcgatcgaggagctggagtcggcgtccgggctgacgcgcgaggccgcgctggaggagctg
acccgcaggctcgtcgagcgggcgacgaacgacgccgcggcgcaggtgcgtcgcgcggag
gcgcaggcgcgccgcacggcggaggcccgcgcacggcgcatcgtcgcgaccgcgatccag
cgcacggcggtcgcgacgagcgcgcaggcgtcgacggtgaccctcccgctgccgtcggac
gacatgaagggccggatcatcggcaaggaggggcgcaacatccgcgcgttcgaggcgctc
acgggcgtcaacgtgctcgtcgacgagcagcccggcgcggtgctcctgtcgtgcttcgac
gccgagcggcgcgagatcgcgcaggtcgcgctcgaggcgctcatggcggacggccggatc
cacccgcagcggatcgaggcggcgtacgcggacgcgctcgcgggcgccgaggaccgcacg
gacgccgccggtcacgacgccgccgagcgcgccggggtcgcggggctgcaccccgagctc
gtgcgcacgctcgggcggctgcggctgcgcacgtcctacgggcagaacgtgctcgagcac
ctcgtcgagtcggcgctcctggccgcccagctcgccgccgagacgggcaccgacgtcgac
gtcgctcgacgtggcgcgttcctgcacgacgtcggcaaggcgctgaccgccgaggtgccc
ggcacgcacgcgctggtcggtgccgacctcgcccgccggctcggcgagtcgccggaggtg
gtcaacgcgatcgccgcccaccacgacgaggtcgcacccgagacggtggaggccgtgctc
gtgcaggtcgcggatgcgatctcggcgtcccggccgggcgcccgccgcgaggacctcgac
cagtacgtcgagcggatggacaagctcgagcagctcgtcgccgagcacgagggcgtccgg
cgcgcgctcgcgatgtccgccggacgtgagatccgggtcgtggtcgagccggagagggtg
gtcgacagcgacctgccgcagctcgcggtgacgatcgcgcggcacatcgagcgggacctc
gcctacccgggcgagatcaaggtgaccgtggtccgcgagacgcgcgcgagcgccacggcg
ggctga
DBGET
integrated database retrieval system
