Cytobacillus firmus: NAF01_09585
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Entry
NAF01_09585 CDS
T08260
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cfir
Cytobacillus firmus
Pathway
cfir03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NAF01_09585 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfir03019
]
NAF01_09585 (rny)
Messenger RNA biogenesis [BR:
cfir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NAF01_09585 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Propep_M14
KH_2
DUF3149
PFF1_TM
Motif
Other DBs
NCBI-ProteinID:
URT73335
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All DBs
Position
1857080..1858642
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AA seq
520 aa
AA seq
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MDLVTAIISILLGLIVGAFVGYFVRKSIAEAKIAGAKDAAEQILEDAKREAEATKKEALL
EAKDEIHKLRTDAESEVRDRRNELQKQENRLMQKEENLDRKDETLDKREALLEKRDDSLS
KRQQHIEEMESKVEDMIKEQQAELERISGLTREEAKSIILERTEQEVAHDVAIMVKESET
RAKEDADKKAKEILSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRRETARLALDKLVQDGRIHPARIEEMVDKARREVDEHIR
EIGEQTTFEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSMEVAQLSGLLAAELGQDETL
ARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSIIAVLV
AAADALSAARPGARRETLENYIRRLEKLEEISESYDGVEKSFAIQAGREIRIMVKPEQID
DLEAHRLARDIRKKIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggatctagtaacagcaatcatctccattttgcttggcctaatcgtcggtgcttttgtt
ggctattttgttcgcaaatctattgccgaagctaaaattgcaggagctaaagatgctgct
gagcagattttggaagacgcaaagcgagaagctgaggctacgaagaaggaagccctgctt
gaagcgaaagatgaaattcacaagctccgcacagatgcggaaagtgaagttcgtgatcga
agaaatgaactgcaaaaacaagaaaatcgcttaatgcaaaaagaagagaaccttgatcgc
aaagatgaaacgttagataaacgtgaagcgcttttagaaaagagggacgattctcttagc
aaaagacaacagcatattgaagagatggaaagcaaagtggaagatatgattaaagagcag
caagctgagctggaacgcatctcaggcttgactcgtgaagaggcaaagtccatcatttta
gagcgcactgagcaggaagtggctcacgatgtcgccattatggtaaaagagagcgagact
agagcgaaagaggacgctgataagaaggcgaaggaaatcctgtcactggctatccaaaga
tgtgcagctgatcatgtagcagaaactactgtatcagttgtcaacctgccaaatgatgag
atgaaagggcgtattattggccgtgaaggccgtaatatccgtactctggaaaccttgacc
ggaattgatcttattatcgatgatacgccggaagcggttattttatccggctttgatcca
attcgccgtgaaactgcacgcttagctttagacaaattggttcaggacggtcgcatccat
ccagctcggatcgaggaaatggtcgataaggcccgccgtgaagtggatgaacacatccgc
gaaatcggagagcaaaccacttttgaggttggtgttcacggcctgcatccagatttaatc
aaaattcttggccgattaaaattccgtacaagctacggccagaacgtgttaaagcattca
atggaagtggctcagctttcagggctgctggctgccgaattgggacaggacgaaacattg
gcacgccgggcaggattgcttcatgatatcggtaaagcaattgatcatgaagtggaaggg
agccatgttgaaatcggtgtggagcttgccactaagtataaggagcatcctgttgtcata
aacagtatcgcttcccaccatggtgacacagagccaacatcaatcattgccgtgcttgtc
gctgcagctgatgctttatcagcagcaagacctggagcaagaagagagacgcttgagaac
tatattcgccgtcttgaaaagcttgaagagatttccgaatcctatgatggtgttgaaaag
tcattcgccattcaagctggacgcgaaatccgcattatggttaagcctgaacaaattgat
gaccttgaagctcatcgtttggcaagggatatccgtaagaagattgaagaagaacttgat
tatccaggccatatcaaggttacggttatccgtgaaacgagggccgttgaatatgcaaaa
taa
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