Colletotrichum fioriniae: CFIO01_06465
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Entry
CFIO01_06465 CDS
T04796
Name
(GenBank) tetratricopeptide
KO
K12600
superkiller protein 3
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFIO01_06465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_06465
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
CFIO01_06465
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_16
TPR_2
TPR_22
TPR_CcmH_CycH
TPR_14
TPR_1
TPR_17
TPR_12
TPR_8
TPR_11
TPR_7
ARM_TT21_5th
ARM_TT21_N
ANAPC3
ARM_TT21_C
DUF4192
T7SS_EccA1_N
DUF5588
ARM_TT21
TPR_COPA_B
NRBF2_MIT
RPN6_N
E_motif
Motif
Other DBs
NCBI-ProteinID:
EXF76541
UniProt:
A0A010R8J9
LinkDB
All DBs
AA seq
1413 aa
AA seq
DB search
MSGAKAVLKAIGDSVKQQKWDDAIQKATEFLEREPKNYQATIFLAFALDKKSRVDDAEKA
YKSAASLRPKDSQAWQGLIKLYEKQDRKRLAAYQQAAISLAEIYRDAEDMYKCQDVIDKF
IDFARSQGDTSQYVEALSVILPGSPIYPALEGRVPHPAKTYETMAQMIETDEKKRINTLI
GERRTRIGARLTEVTLEVKREVIAQSKLEFVYHQLINWTNDDDLRRKYEEKLLQYCYDRL
LVAPHGPEKGQALQAVLKLALDMVIIKHPFRLAWEIAIDYKDAKEIKEWDVNMLRDYCSF
FPETDLYKVITGFLTSSISPFPKPTPAALEAEETEEESEDDEGGGVSMVPLTEQDRILMM
TEGITTSNSLFAHRLMGEYYQHLEEHETTVELMRKSMGHIKTERNKTGMSFQNTHDAFSL
YLATGLVFFQSPRHHTEAKSLFEGVLSHDPSSTPALIGVGLIYEEEEDYDDAIDFFGRAL
ERDPSNLRVKTESAWVQALKGDFETAKAELEDSLPLIEEMPTPSKELLAQTQYRLGSCIW
NIDTSKAARKSRNGAYLYFLDALKNNLNFAPAYTSLGVYYADYAKDKKRARRCFQKAVEL
SASEVEAAKRLAESFADEGDWDRVELVAQRVVDSGKVKPPPGSKRKGISWPFSALGVAEL
NKQDFHKSIVSFQSALRIHPEDYHSWVGLGESYYSSGRYIAATKAILNAQKLEETAPAEA
LGDTWFTKYMLANVKRELAEFDEAIALYQDVIEGRPDEDGVAIALIQTMVDSALDSVEKG
LFGKAIHLAIDTIDFASKAAASVTETFNFWKSLADACSVFSAVQSRAVDFPADIIMTLID
SSDKEAYDLFADVDNVGTGVISAKGLFSEDEKLGVDLTRCIHATILCHKRAIHVSANDLH
AQAVAYYNLGWAEHRAHICLPSSIRKKSSVYLKTAMKCFKRAIELEAGNPDFWNSLGVVT
SEVNPAVSQHSFVRSLHLNERSPAAWTNLGTLALLQNDVQLANEAFNRAQSTDPDYAHAW
LGQGFVALLYGKVKEARGLFTHAMEIAEASSVLTRRQYSVAVFDFILGTTSANVASLIQP
IFALGQLNSLKPQDLAYGHLSAMFLERTRDTGKAVETLEKICGILESDYEVTESPQSLAH
FALAKTDLARSYLAAGAFEQAIECGEMAIQLSADESDNELSREERKKARLSAHLTVGLAQ
YYSEDVNEALLCFESALEESDNNPDAVCLLAQVLWATGAEESREKARGALFEVIEKQPDH
VQSVLLLGVIAILDNDEESVEAVVSELQGLRTSHNVGDAEQSQIGEVLNAIVKLGDTSTE
EDVMTQIQTDIMLYPHLPHGWSNLAEFSGEQHAAAMALTVAKKGAPPRGTLEAESLAKAY
AGTGVAADAQTAIFLAPWKPDGWNSLREAVYGN
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgtccggggccaaggctgtactgaaggccattggcgactctgtgaagcagcaaaaatgg
gatgatgctatccagaaggcaactgaatttctggagcgagagccaaagaactaccaggcg
accatcttcctcgcttttgccctcgacaagaagagccgcgtcgatgatgcagagaaggct
tacaagtctgcggcgtcactacggccaaaggacagtcaggcgtggcaaggtctcatcaag
ctctacgagaagcaagaccgcaaacgattagccgcctaccagcaagctgccatcagcttg
gctgagatttaccgtgatgcagaagacatgtacaagtgccaagatgtcattgataagttc
attgactttgcgagatctcaaggggatacttcgcaatatgtcgaagctctcagtgtcatc
ctacctgggagcccaatctaccctgctctagagggtcgcgtcccgcacccggccaaaacc
tacgagaccatggcgcaaatgattgagacggacgagaagaagcgcataaacacactcatt
ggcgaacgacggacaaggatcggcgcgcgtctgactgaggtcactctcgaggtcaagcgt
gaagtcatagctcagagcaagctcgagttcgtctaccaccagctgatcaactggacgaac
gatgacgatctccgacgaaagtatgaggaaaagcttcttcagtactgctacgaccgtctc
ctggtcgcaccacacggcccggaaaagggccaggctcttcaagcggtcctgaaactggcg
cttgacatggtcatcatcaagcaccccttcagacttgcctgggagattgccatcgactac
aaggacgcaaaggagatcaaggagtgggatgtcaatatgctgagagactattgctcattc
ttccccgagaccgacctctacaaagtcatcaccggctttctgacgagtagcatctctccc
ttccccaagccgacaccggcggctctcgaagcggaggaaaccgaggaagagagcgaggac
gatgagggaggcggcgtttccatggtgccgctcacggagcaggatagaatcctgatgatg
actgagggcatcactacgtccaactcactatttgctcatcgtttgatgggagagtactac
cagcatttggaggaacacgaaacgacggtggaactgatgcgcaagtcgatgggacacatc
aagacggagagaaacaagactggcatgtcgttccagaacacccatgatgccttctctttg
tatctggcaacaggtttggtgttctttcagtcgcctagacaccacactgaggccaagtcg
ctgtttgaaggggttctgtcacatgatccgtcgtctactccagcactgattggtgtcggt
ctcatctacgaagaagaggaggactacgacgacgccatagatttctttgggcgtgctctg
gagagagatccctccaatctgcgggtcaagaccgaatctgcctgggtccaggcgctcaag
ggagactttgagactgcaaaggcagagctggaggattcgctgcctctcatcgaggagatg
cctacgccttcgaaggagcttctcgcgcagacacagtaccgactgggttcatgcatttgg
aacattgacacgtccaaggcagcccgcaagagccgcaacggcgcttatttgtacttcttg
gacgccttgaagaataacctcaactttgcgccagcctacacgagtcttggcgtctactac
gccgactacgccaaagacaagaagagagccagacgctgcttccagaaggccgtagaactc
tctgcctccgaagtcgaagccgccaagcgtctggccgagtcctttgccgacgaaggcgac
tgggacagagtcgagctcgtggctcagcgtgtggttgattctggaaaggtcaagccgccc
ccgggctccaagaggaagggcatcagttggcctttctccgccctcggtgtggcggagctg
aacaagcaggatttccacaagtctattgtgtctttccaatctgcgctgcgaatccaccca
gaggactaccactcgtgggttggcctgggtgaaagctactactcttctggccggtacatt
gcagccaccaaggcgattctcaacgcccaaaagctggaggagactgcgcctgccgaggct
ctgggcgacacttggttcaccaagtacatgcttgctaatgtcaagcgtgagctggctgaa
ttcgatgaggccatcgctctctaccaggatgtcatcgagggccgccctgacgaggatggt
gttgccattgctctcatacagaccatggtcgacagtgctcttgacagtgtagagaagggt
ctatttggcaaggcgatacacctcgccattgacacgatagactttgcctcaaaggccgct
gcaagtgtcaccgagaccttcaacttctggaagtcacttgctgatgcttgttctgtcttt
tctgcggtacaaagccgagcggtcgacttcccagcagatataatcatgacactcatcgac
agtagcgataaggaggcatatgacctctttgccgatgtggataacgtcggaaccggtgtc
atctccgcaaagggcttgttctctgaagatgagaaacttggtgttgatctgacaagatgc
atccacgcaacgatcttgtgtcataagcgggcaatccacgtctccgcaaacgacttgcac
gcacaagcagttgcatactacaacctcggctgggccgagcaccgagctcacatttgcctg
ccctcaagcatcaggaagaagtcgagcgtctacttgaagacggccatgaagtgcttcaag
cgagccattgagctggaagccggcaatccggatttttggaactctttgggtgttgtgacg
agcgaggtcaacccggccgtctcgcagcactcgttcgttcgcagcttacacctcaatgag
aggagcccggcagcctggaccaacctcggcaccctggcccttctccagaacgacgtgcag
ctcgcgaatgaggccttcaaccgggcgcagtcgaccgatcccgactacgcgcacgcgtgg
ctcggccagggcttcgtggcactcttgtacggaaaggtcaaggaggccaggggcctgttt
acgcacgccatggagatcgccgaggcgtcttcggtgctcaccagacgtcagtactcggtg
gcggtgttcgacttcatcctaggcaccacgtccgccaacgtcgcctccctaatccagccc
attttcgccctaggccaactgaacagcctaaagccccaggacctcgcgtacggacacctg
tcggccatgttcctggagcggacccgcgatacgggaaaggcggtggagacgctcgagaag
atctgtggcattctcgagtccgactacgaggttaccgagtccccgcagtccctcgcgcac
ttcgcgctggccaagaccgacctggcgaggtcctacctcgccgcgggcgcgttcgagcag
gccattgagtgcggcgagatggccatccagctgagcgccgacgagtccgacaacgagctg
agcagggaagagcgcaagaaggcgcgtctctcggcgcacttaaccgtcggactggcgcag
tactacagcgaggacgtcaatgaggctctcctatgcttcgaatcggcgctcgaggagtcc
gacaacaacccggacgctgtctgcctccttgcgcaggtgctctgggccacgggcgccgag
gagtcccgcgaaaaggcccgcggcgcgctgttcgaggtcattgagaagcagcccgaccat
gtccagtccgtcctcctgctgggcgtcatcgccattctcgacaacgacgaggagtcggtc
gaggccgtcgtgtccgagctgcagggcttgcggaccagccacaatgtcggggacgcagaa
cagtcgcagattggcgaggtgctcaacgccattgtgaagctcggggatacaagcacggag
gaggacgtcatgacgcagatccagacggatatcatgctctacccccacctgccgcacggc
tggtcgaacctggccgagtttagcggggagcagcatgctgccgcgatggcgttgacggtg
gccaaaaagggagcgccgcccagaggtacgcttgaggcggagagtttggcaaaggcatat
gctgggacgggagtcgcggcggatgcccagacggccattttcttggctccttggaagcct
gatggttggaactctctgcgggaggccgtgtacggcaattag
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integrated database retrieval system
