Chryseobacterium fluminis: ODZ84_00625
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Entry
ODZ84_00625 CDS
T09749
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cflu
Chryseobacterium fluminis
Pathway
cflu00040
Pentose and glucuronate interconversions
cflu01100
Metabolic pathways
cflu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cflu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
ODZ84_00625
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ODZ84_00625
Enzymes [BR:
cflu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
ODZ84_00625
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pectate_lyase_5
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
UZT98108
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All DBs
Position
complement(145903..147009)
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AA seq
368 aa
AA seq
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MKINIKMMLSTAVFSAALALSGCSSEDLKTEIAGSSTDAGNEAAGDIIPLGNCLAPGWAS
QNGGTTGGGTSAETTVTTYIQLKAALENTAVKVIKISGTITITTRLSLQDQTGKTVYGAS
GAKLVSTDQTASGSGIINIKRCNNIIIRNLIFEGPGAYDTDGWDNAILDDCRNVWIDHCE
FRDGVDGNFDIKNKSDYITVSYTKFHYLKTPKPGGSGGTDDHRFSNLIGSSDGATADAGK
LNVTFVRCWWAPGCRERMPRVRFGKIHILNSYFNSTVSNKCIAAGVQANILVDRNVFENV
KEPVNLMSGYTAVTVTGNSFINTTGNTSGSGTAFTPPYSIPALSVSSVKADVTANAGATL
GGNICNTL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaacattaaaatgatgctgtctacagcagtattcagcgcagcattagcctta
tcaggctgcagctccgaagatttaaaaactgagatagccggatcttccacagatgcaggc
aatgaagctgccggagatattattcccctgggcaattgtctcgcaccgggctgggcttca
cagaatggcgggactacaggaggcggaacttctgcagaaactacggttaccacgtacatc
caactgaaagcagcacttgaaaatactgctgtaaaggtcattaaaatatccgggaccatt
acgattaccacccgactcagtctgcaggaccagacaggaaaaaccgtgtatggagcgagt
ggcgccaaactggtttctacggatcagaccgcaagtggatcgggaattattaatatcaaa
agatgcaataacatcattatcaggaacctgatttttgaaggcccgggtgcgtatgatacg
gacggttgggataacgccatcctcgatgactgcagaaatgtatggatcgaccattgtgaa
ttcagggatggtgttgacggaaattttgacattaaaaacaagtctgattacatcaccgtg
tcctatacaaaattccactacttaaaaacgccaaaacccggcggatcgggtggaacggat
gaccatagattctccaatcttatcggctccagcgacggagctactgctgacgccggaaaa
ttaaatgtaacctttgtccgttgctggtgggcaccgggctgcagagaacgtatgccaagg
gtaagatttggaaaaattcatatcctaaacagctattttaacagcactgtaagcaataaa
tgtattgctgccggagttcaggctaatattcttgttgacagaaatgtttttgaaaatgta
aaagagccggtaaacttaatgagcggatatactgccgttaccgttacagggaacagtttt
atcaataccaccggaaatacttcaggaagcggcactgctttcaccccgccttattcaatt
cctgcgctgtctgtatcttctgtaaaggcagatgtcacggcaaatgcaggagcaaccctg
ggagggaatatctgtaataccttataa
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