Camponotus floridanus (Florida carpenter ant): 105252527
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Entry
105252527 CDS
T03919
Name
(RefSeq) pre-mRNA-splicing factor 38B isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105252527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfo03041
]
105252527
Spliceosome [BR:
cfo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
105252527
Complex C
U4/U6.U5 tri-SnRNP related factors
105252527
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
105252527
NCBI-ProteinID:
XP_011258233
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MQMQEAEGADGSPWNNSSGCDEDRRPVQKEGKKSNVLPLWGNERTMNLNPLILTNIQSSH
YFKVNLYELKTYHEVIDEIYYKVSHLEPWEKGSRKTAGQTGMCGGRFMQVRGVGAGGIVS
TAYCLLYKLFTLRLTRKQLNGLINHPDSPYIRALGFMYIRYTQPPADLFSWYSDYLEDEE
ELDVKAGGGQTMKMGDILKQFLTKLEWFSTLFPRIPVPIQKDLELRLAERFPQQQVNARN
AKPPITLNSHGKYGNKDSRNKDNGNLMSRNQQARHIPDNETQWGEAERMSHWRARSDEDR
KDKNRERDRERERLRERDRERARERDRERDRHGRRSDSRDRNRRQRDYRSRSRDKYRDRS
KDRHRDKDRHRDRRGSPYDYATELARERERQRRERE
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgcaggaagccgaaggtgccgatggttcaccatggaataattccagtggctgt
gatgaagaccgtagaccagtccaaaaggagggtaaaaaatcaaacgtactaccattatgg
ggcaatgaaaggactatgaatttgaatcctttgattctcaccaatatacaatcgtcgcac
tatttcaaggtgaatctgtatgagctcaagacttaccacgaagtgattgatgagatttat
tacaaggtttctcatctagaaccatgggaaaagggcagcaggaaaactgcaggccagact
ggcatgtgtggaggccggttcatgcaggtacgaggcgtgggagctggcgggattgtctcc
acggcttactgtctactgtataaactcttcacgctgagactgacgagaaagcagctgaac
ggactcattaatcatccggattcaccctacattcgcgccttgggatttatgtacattaga
tatacgcaaccaccagcagacttgtttagctggtacagtgattatctggaggatgaagag
gaactagatgtaaaggcgggcggtggacagacgatgaagatgggagacatcctcaagcag
tttttaacgaaactcgagtggttctctacgttgtttccacggattccagtaccaatacaa
aaggatctggagctgcgacttgccgagcggtttccgcagcagcaggtgaacgcgcgcaat
gctaaaccaccgatcaccctcaacagccatggcaagtatggcaataaggacagccgtaat
aaggacaatggcaatctgatgtcacgcaaccaacaggctcgacacattcccgacaacgag
actcaatggggtgaggcggaacgtatgagtcactggcgtgccagatccgatgaggatcgc
aaggacaagaatagggaacgcgaccgggaacgagagagattgcgagaacgcgatagagag
agagcccgtgaaagagatcgcgagagggacagacacggcagaagatccgatagtcgtgat
agaaatagaagacaaagagactacagaagtcgcagtagagacaagtacagagatcggagt
aaggaccgtcatcgcgacaaagatcgacatcgggataggagaggttcgccatacgattat
gccacagaattggcacgtgagcgagaaaggcaacgaagggaaagagaatga
DBGET
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