Chitinibacter fontanus: HZU75_10370
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Entry
HZU75_10370 CDS
T06720
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cfon
Chitinibacter fontanus
Pathway
cfon03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HZU75_10370 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfon03021
]
HZU75_10370 (rpoB)
03400 DNA repair and recombination proteins [BR:
cfon03400
]
HZU75_10370 (rpoB)
Enzymes [BR:
cfon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HZU75_10370 (rpoB)
Transcription machinery [BR:
cfon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HZU75_10370 (rpoB)
DNA repair and recombination proteins [BR:
cfon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HZU75_10370 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
QLI83240
UniProt:
A0A7D5VDA5
LinkDB
All DBs
Position
2195362..2199534
Genome browser
AA seq
1390 aa
AA seq
DB search
MKYSFTEKKRIRKSFAKRASVLEVPFLLATQIDSYSEYLQLGVPIEARREIGLQAAFNSI
FPIVSHNEYARLEFVHYSLGEPAFDVKECQQRGITFAAPLRARVRLVIMDRESSKPTIKE
VKEQDVYFGEIPLMTRNGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSARI
IPYRGSWLDFEFDPKDLLFFRIDRRRKMPVSILLKALGYTPEQILAEFFDTDTFFLTEDG
VFWELQSDRLRGEVAKFDIVAEDGKVLAQKDKRITAKTIRDINNAGMTRVQVPLDYTYGR
VLAKDVISPETGEVVAKANDEITEDLLVKLDANEVKEITTLYINDLDQGGFISSTLRTDD
TQDQWQARVAIYRMMRPGEPPTEDAVQALFNGLFFSEDRYDLSAVGRMKFNSRAYPDRLD
EKAPGWQRRFYERVGGKGITGPGILSTEDIIAVIGILLELRNSRGEVDDIDHLGNRRVRS
VGELAENQFRAGLVRVERAVKERLSQAESDNLMPHDLINAKPVSAAVKEFFGSSQLSQFM
DQTNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSL
SCYARTNEYGFLETPYRKVVDGKVTAEIEYLSAIQEGKYVIAQANAQTDDENNLIDELVT
CREAGETIVATPDRVQFMDVAPSQIVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRA
EKPFVGTGIERTCATDSGTAVTALRGGVVDYVDATRIVVRVNNDEVIAGEAGVDIYNLVK
FTRSNQNTNTNQRPIVKKGDLLAKGDVVADGASTDLGELALGQNMTIAFMPWNGYNFEDS
ILISEKVIADDRYTSIHIEELNVMARDTKLGPEEITRDISNLSERMLGRLDDAGVVYIGA
EVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMTGTVIDVQVFT
REGIERDKRAQAIIEEQLRRYRQDLNDQLRIVEADLFKRIEDMLVGKVANGGPKKLAKGA
TVTAEYLADLPSKHDWFDIRLSDEESARQLEANKDLIAQTKAEFELRFEDKKRKLTQGDE
LPPGVIKMVKVYVAVKRRLQPGDKMAGRHGNKGVVSKILPVEDLPHMADGTPVDIVLNPL
GVPSRMNIGQILEVHLGWAAKGIGQRINAMLREQQNTAEVRAYLEKIYNTNGKSEDIASL
DDAEVLQLAQGLSTGMTFASPVFDGAKESEIREMLDLAYPDADPRTQQLSFNSSKTQMQL
FDGRTGEPFERKVTVGVMHYLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGE
MEVWALEAYGAAYTLQEMLTVKSDDVNGRTKVYENIVKGDHRIDAGMPESFNVLVKEIRS
LGIDIDLETY
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgaaatactcgttcactgagaagaaacgcattcgcaagagttttgcgaagcgggcaagt
gtccttgaagtgccgtttctgttggctactcagatcgactcttattccgaatatctgcag
ctaggtgtgcctattgaggcgcgccgcgaaattggcttgcaggcagcgttcaactcaatt
ttcccgattgtttcgcacaatgaatatgcacgcctagagtttgtgcattactcgttgggc
gaacctgcctttgacgttaaagagtgtcagcagcgtggtatcacgtttgccgcacctttg
cgcgctcgtgttcgtctggtgattatggatcgtgaatcctcgaaaccaacgatcaaagag
gtgaaagagcaggacgtgtacttcggtgaaatcccgttgatgactcgtaacggctcgttc
gtaattaacggtaccgagcgcgtaattgtgtctcagttgcaccgctctccgggtgtgttc
tttgaacatgacaagggtaaaactcatagttcagggaaactactgttctctgctcgtatt
attccttaccgcggttcatggttggattttgaatttgatccgaaagatttgttgttcttc
cgtattgaccgtcgtcgcaaaatgcctgtatcgattttgctcaaagcgctggggtatacg
cctgaacagattctggctgaattctttgacactgataccttcttcctgactgaagacggt
gtgttctgggagttgcagtctgaccgcctgcgcggtgaagttgcgaagtttgatatcgtt
gctgaagatggcaaagttttggcgcaaaaagataagcgcattactgccaaaacgatccgc
gatatcaacaatgccggcatgacgcgcgttcaagttccgcttgattacacgtatggccgc
gttttagcgaaagacgttattagcccagaaacgggtgaagttgttgctaaagccaatgac
gaaataaccgaagatttgctggttaaacttgatgccaatgaagtgaaagaaatcactacc
ttgtacatcaatgaccttgaccaaggcggctttatttcttcgactttgcgcactgatgat
acgcaagatcaatggcaagcccgcgttgcgatttatcgcatgatgcgtccaggtgagcca
ccaacagaagacgcggttcaagctctgttcaacggtctgttcttctctgaagatcgttac
gatctgtcggcggtcggccgcatgaaatttaacagccgtgcttacccagatcgtcttgat
gaaaaagcaccaggttggcagcgacgtttctacgagcgcgtaggtggcaagggcattact
ggccctggcatcttgtcgacggaagacattattgccgtaatcggcatcttgctcgaattg
cgcaatagtcgtggcgaagtggacgatatcgaccacttgggcaatcgtcgcgtacgttca
gtgggtgagttggctgagaaccaattccgtgcgggtttggtgcgtgttgagcgtgcagtg
aaagagcgtctgtcacaagctgaatcagacaatctgatgccgcatgatctgatcaatgca
aaaccagtgtcggctgcagtgaaagagttcttcggctcatcacaattgtcgcagtttatg
gatcaaaccaatccattgtctgaaatcacgcacaaacgtcgtgtttcagccttgggtcca
ggcggtttgactcgtgagcgcgcgggctttgaggttcgtgacgtacatccaacgcactac
ggtcgtgtttgtccgatcgagacaccagagggtccaaacattggtttgatcaactcactg
tcttgctacgcacgcaccaatgagtatggtttccttgagacaccataccgcaaagtggtt
gatggcaaagtaactgctgaaattgagtatctgtcagctatccaagaaggcaaatacgtt
atcgctcaggccaatgcgcagaccgatgatgaaaataacctgattgatgaattggtcact
tgccgcgaagcaggcgagaccatcgttgctacgccagatcgcgttcagttcatggacgtt
gcaccaagccagatcgtctcagttgccgcttcattgattccattcttggagcacgatgac
gccaaccgtgcattgatgggcgccaacatgcagcgtcaggcagtaccttgcttgcgcgca
gaaaaaccattcgtgggtaccggtatcgagcgcacgtgtgcgactgactcaggtacagca
gtaactgctttgcgtggtggtgtggttgattacgttgatgcaactcgtatcgtagttcgt
gttaacaatgacgaagtaattgctggtgaagccggtgtagatatctacaacttggttaaa
ttcacgcgttctaaccagaacaccaacactaaccagcgcccaatcgtgaagaaaggcgat
ttgctggctaaaggtgatgtggttgctgacggcgcgtcaactgatcttggtgaattggcg
cttggtcaaaacatgaccatcgccttcatgccttggaatggttacaacttcgaggattcg
attctgatctccgagaaggtcattgcagatgatcgttacacttcgatccatatcgaagaa
ttgaacgtgatggcacgtgacaccaaactgggcccagaagaaattacccgcgatatttca
aacttgtcagagcgtatgctcggccgtttggatgatgctggtgtggtttacatcggtgct
gaagttgaagctggtgatgttctggtaggtaaagtaacgcctaaaggcgaaactcaactc
acgccagaagaaaaactgctgcgtgcaatcttcggtgaaaaagcgtctgacgtgaaagac
acgtcactgcgcgtgccatcaggcatgaccggcacggtgatcgacgttcaagtatttacc
cgcgaagggattgagcgtgataaacgtgctcaggcgattatcgaagagcaattgcgtcgt
taccgccaagacttgaatgaccagttgcgtatcgttgaagctgacttgttcaagcgtatt
gaagacatgttggttggcaaagtagccaacggcggcccgaaaaaactggccaaaggcgct
acggttactgctgaatacttggcagatttgccaagcaagcatgactggtttgatatccgc
ttgtctgatgaagaaagtgctcgtcagctcgaggcgaataaagacctgatcgctcagact
aaagctgagtttgaattacgttttgaagataaaaaacgtaaattgacgcaaggtgacgaa
ttgccaccaggcgtgatcaaaatggtcaaagtctatgttgcggtgaaacgtcgtctgcag
ccaggtgataagatggccggtcgtcacggtaacaagggtgtggtttctaagatcctgcca
gttgaagacttgccacatatggccgacggtacgccagtggacatcgtgttgaacccattg
ggcgttccatcacgtatgaatattggtcagattctggaagtgcatttgggttgggctgcg
aaaggtattggtcaacgcattaacgcgatgttgcgtgaacaacaaaacaccgctgaagta
cgcgcttacctcgaaaagatctataacaccaatggcaaatcggaagacattgctagcttg
gacgacgcagaagtattgcagctggctcaaggcttgagcacaggtatgacttttgcgagc
cccgtatttgacggtgccaaagaaagcgaaattcgcgaaatgcttgatctggcttaccca
gatgcggatccgcgtactcagcagttgtcatttaactcaagcaaaacgcagatgcagcta
tttgatggccgcacgggtgagccgtttgagcgtaaggtcactgtgggtgtgatgcattac
ttgaaactgcaccacttggtggatgacaagatgcatgcgcgttcgacaggtccatactct
ctggtaacgcaacagccattgggcggtaaagctcagttcggtggtcagcgtttcggtgag
atggaggtttgggcactcgaagcttacggcgcagcgtacaccttgcaagagatgttgact
gtgaagtccgacgacgtaaatggtcgtaccaaagtatacgaaaacattgtgaagggtgat
caccgcattgatgctggcatgccagaatcattcaatgtattggttaaggaaatccgttcg
ctcggtattgatatcgatctggaaacctattga
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