Choristoneura fumiferana (eastern spruce budworm): 141436063
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Entry
141436063 CDS
T11020
Name
(RefSeq) testis-expressed protein 10 homolog
KO
K14827
pre-rRNA-processing protein IPI1
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
141436063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfum03009
]
141436063
Ribosome biogenesis [BR:
cfum03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
141436063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ipi1_N
HEAT_SCC3-SA
TPR_CAND1
UME
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
141436063
NCBI-ProteinID:
XP_073955005
LinkDB
All DBs
Position
16:complement(7030824..7033056)
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AA seq
644 aa
AA seq
DB search
MPQTGATRYQKFLKSEKAKTKLKAKKDLPRGTNVTKTNFKVKQIVIKEQLKKHGENEALS
ARKLNAKDLLSRLNHFNTQSCKDALEGIKELISGHANVLEENLGQLINGVAPLALNIEAV
VRREALKVLHLMLSNVTAEKVEPFFDILSTYLRSAMTHIDNRIQEDSLLFLDVLLMCSSE
NIAKDFHRIMPNFLDMISKLRVDSQPGRTLTVDLKSQITSVKWRVKVLFRLQDFLHKYVE
HNKINAVNKELAENTKVFDSTKLSCYPLFNPSYTSICYVSSFSSKHAQDVLIDEAEKFIK
YIETLMPLLFEAWVEVCANVNSEKNMETVISEDSASLLKRILEVISMLWILVQHLNKKNP
HSNIENLFRQNHRKSFIQHFVQPFPFVTNTRSRQQKGPTNPNFEDVITDPKLVIENLSIC
QLFIELNPNVHVKNQSKEISSVLNYMEKIFNENSQTEVSDLLIKILDSVFSNEVNNWTRT
LSVMDALLRKIIWAYFNKNLRSNFRQKIFSLLCKIALSDKLAHFHTTDAYEMWLKNLPDI
LLEKSVTMQVIDILHKFSICNNKIFNSVIKPKLLQIIENLPHISISDSLNNTSYYKMFSL
LYWVKCWDDESLNLLEKQLINNVYNLDHGKYIFDTLRHRSSSNV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaactggtgccacaagatatcaaaaatttctaaagtcggagaaagcaaaaact
aaattaaaagccaagaaggacttgccaagaggtacaaatgtgacaaaaacaaattttaaa
gtgaaacagattgtaatcaaggaacagttgaaaaaacatggtgagaacgaagccctatct
gcacggaaacttaacgctaaagatctcttgtccagacttaatcattttaatacacaatct
tgcaaagatgctttggaagggataaaggagctgataagcggtcatgccaatgttttggag
gaaaatctgggtcaattaatcaatggcgtggctcctctggcactgaatattgaagctgtg
gtccgccgcgaggccctgaaagttcttcatttgatgctttcaaatgtaactgctgaaaag
gttgaaccattctttgatatactgtcaacctacctgaggagcgcaatgacacacatagat
aacagaattcaagaagactctctcttattccttgatgtactcctcatgtgcagctctgaa
aatatagctaaagatttccatagaatcatgcctaacttcttggatatgatatccaagtta
cgggtagactcccaaccaggaagaacactcacggtggatcttaaaagtcaaataactagt
gtaaagtggagagttaaagtactcttccgtctgcaagattttctgcacaagtatgtagag
cacaataagattaatgccgttaataaagaacttgcagaaaataccaaggtctttgacagc
actaaattaagctgctatccattatttaatccaagttacacatcaatctgctatgtgtca
tcattttcttccaaacacgcacaggatgtgttgatagatgaagcagaaaaatttattaag
tacattgaaactttgatgccactgctgtttgaggcttgggtggaagtctgtgccaacgtg
aactctgagaaaaacatggaaactgtgatcagtgaggattctgcaagtttactcaaacga
atccttgaagtcatttcgatgctgtggattcttgttcaacacctaaataagaagaatccc
cattctaacatagagaatcttttcagacaaaatcatcgcaaatccttcatccagcacttt
gttcaaccatttccttttgtaacaaatacaaggtcaaggcagcaaaagggaccaacaaac
cctaattttgaagatgtgatcactgacccaaagttagttattgagaatctatcaatctgc
caattatttattgagctaaatcctaatgttcatgttaaaaatcagagcaaagaaataagc
tctgtgcttaattatatggaaaagatattcaatgagaacagccaaactgaggtcagtgat
cttctcatcaaaattttggactctgtattttcaaatgaagtgaataattggactaggacc
ctctctgtaatggatgctttgctgagaaaaatcatatgggcttatttcaacaaaaatctg
cgcagtaatttcagacaaaagattttttcactcctttgcaaaatagctttgagtgacaaa
ttggctcatttccatacaactgatgcatatgaaatgtggctcaagaacttgcctgatatt
ttactagagaaatctgtcactatgcaagtaattgacattcttcacaagttttctatatgc
aataacaaaattttcaattctgttatcaagcccaaactattacaaattattgaaaattta
ccacacatttctatatctgatagcctcaacaacacaagctattacaaaatgttttcttta
ctgtattgggtaaaatgttgggatgatgaatctttgaatttattggaaaaacagctaatt
aacaatgtgtataacttggatcatggaaaatatatatttgacacactgagacacagaagt
tctagtaatgtataa
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